iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043930

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Genbank Nucleotide ID

CM000842

Gene Name

LOC100781100; GLYMA_09G234100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA09G36870	GLYMA09G36870.1	GLYMA09G36870.1
GLYMA09G36870	GLYMA09G36870.3	GLYMA09G36870.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-23	82.0	50	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v+ ++   d  +l++Gs D t k+WD+ +g +l
   Q: 50   GHNGAVWTCDVsRDsVRLITGSADQTAKLWDVQSGLQL 87
           8**********977799****************99887 PP

Organism

Glycine max

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLKYNR DGDLLFSCAK DHNPTVWFAD NGERLGTYRG HNGAVWTCDV 60
SRDSVRLITG SADQTAKLWD VQSGLQLYTF NFDSPARSVD FSVGDRLAVI TTDPFMELSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGATATATT TGTTTTGTAA GATAATAGGT TAAAATATTA ATAAGCGAAT GTTGAACCCT 60
AACTGAGGAT ACACTCGCAC CGGTAGCTGC TGCAGCCCCT TGTGAGTGAG TGTTCTGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

gmx:100781100

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008098	Aspergillus clavatus	43.94	4.00e-76	278.00
IUUC-Ate-010285	Aspergillus terreus	45.09	1.00e-78	286.00
IUUC-Cel-018226	Caenorhabditis elegans	40.85	1.00e-71	263.00
IUUC-Cin-025597	Ciona intestinalis	44.79	3.00e-84	304.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	44.95	2.00e-77	282.00
IUUC-Cme-027304	Cyanidioschyzon merolae	53.09	6.00e-91	327.00
IUUC-Lpe-051338	Leersia perrieri	81.67	3.00e-152	530.00
IUUC-Mor-057025	Magnaporthe oryzae	44.62	2.00e-76	278.00
IUUC-Mvi-060399	Microbotryum violaceum	44.64	2.00e-78	285.00
IUUC-Ncr-068820	Neurospora crassa	45.54	1.00e-77	283.00
IUUC-Ogu-078207	Oryza glumaepatula	82.15	2.00e-160	558.00
IUUC-Oin-079878	Oryza indica	82.82	4.00e-162	563.00
IUUC-Olo-080677	Oryza longistaminata	69.74	2.00e-150	525.00
IUUC-Opu-083136	Oryza punctata	83.13	2.00e-163	568.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence