iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mvi-060399

Ensembl Protein ID

MVLG_05608T0

UniProt Accession

U5HER8; U5HER8_USTV1

Genbank Protein ID

KDE03916.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 39 kDa subunit homolog

Genbank Nucleotide ID

AEIJ01000591

Gene Name

TIF34; MVLG_05608

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MVLG_05608	MVLG_05608T0	MVLG_05608T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-22	76.7	50	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ v+ ++  s+ t+l+sGs D+++k+WD+rtg++l 
   Q: 50   GHNGTVWTIDAdSTsTYLISGSADNNLKLWDVRTGTCLY 88
           899*****9999667**********************86 PP

Organism

Microbotryum violaceum

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILLSGHE RSLTQVKYNA EGDLLFSASK DHIINVWHSH NGERLGTYEG HNGTVWTIDA 60
DSTSTYLISG SADNNLKLWD VRTGTCLYTW EFPTAVKRVM WSEDDSKILA VTEQRMGFKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCTCTGTG TTCCACCGAT CCCCCTCTAC ACGATCATGG TCAGTCCTCT CGAGCTTTTT 60
CAAACGCTGG CAGCTGCACC ACGCTAACAC GCCATCTGTA CCCCACCAGC GCCCCATCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0022627--C:cytosolic small ribosomal subunit
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0043614--C:multi-eIF complex
GO:0034399--C:nuclear periphery
GO:0003743--F:translation initiation factor activity
GO:0071470--P:cellular response to osmotic stress
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation
GO:0002188--P:translation reinitiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001321	Ailuropoda melanoleuca	47.43	2.00e-83	300.00
IUUC-Atr-002468	Amborella trichopoda	42.21	1.00e-41	161.00
IUUC-Apl-003841	Anas platyrhynchos	47.43	3.00e-83	300.00
IUUC-Aca-005123	Anolis carolinensis	46.99	4.00e-84	302.00
IUUC-Aly-006532	Arabidopsis lyrata	43.49	2.00e-76	277.00
IUUC-Ath-007094	Arabidopsis thaliana	43.79	3.00e-76	276.00
IUUC-Ago-008000	Ashbya gossypii	42.94	3.00e-80	290.00
IUUC-Acl-008098	Aspergillus clavatus	53.71	2.00e-101	360.00
IUUC-Afl-008494	Aspergillus flavus	55.12	2.00e-106	377.00
IUUC-Afu-009080	Aspergillus fumigatus	53.41	2.00e-101	360.00
IUUC-Ani-009230	Aspergillus nidulans	56.16	4.00e-105	372.00
IUUC-Aor-010114	Aspergillus oryzae	55.12	2.00e-106	377.00
IUUC-Ate-010285	Aspergillus terreus	54.65	2.00e-102	363.00
IUUC-Ame-011534	Astyanax mexicanus	46.87	2.00e-83	300.00
IUUC-Bgr-012121	Blumeria graminis	50.30	7.00e-96	342.00
IUUC-Bta-013143	Bos taurus	47.59	5.00e-84	302.00
IUUC-Bci-013950	Botrytis cinerea	53.61	4.00e-104	369.00
IUUC-Bdi-015019	Brachypodium distachyon	42.86	8.00e-75	271.00
IUUC-Bol-015709	Brassica oleracea	42.43	1.00e-73	269.00
IUUC-Bra-018077	Brassica rapa	42.15	1.00e-74	271.00
IUUC-Cel-018226	Caenorhabditis elegans	38.62	1.00e-66	244.00
IUUC-Cja-019741	Callithrix jacchus	47.59	4.00e-84	302.00
IUUC-Cfa-021204	Canis familiaris	47.43	3.00e-83	300.00
IUUC-Cpo-021661	Cavia porcellus	47.43	1.00e-83	301.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	41.06	2.00e-68	250.00
IUUC-Csa-024038	Chlorocebus sabaeus	47.59	4.00e-84	302.00
IUUC-Cin-025597	Ciona intestinalis	44.14	4.00e-82	296.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	53.01	1.00e-100	357.00
IUUC-Cne-026838	Cryptococcus neoformans	54.86	4.00e-115	405.00
IUUC-Cme-027304	Cyanidioschyzon merolae	38.55	5.00e-63	232.00
IUUC-Dre-028567	Danio rerio	45.48	9.00e-82	295.00
IUUC-Dno-029171	Dasypus novemcinctus	47.43	5.00e-83	300.00
IUUC-Dor-030257	Dipodomys ordii	40.80	5.00e-33	133.00
IUUC-Dse-031191	Dothistroma septosporum	52.07	2.00e-95	340.00
IUUC-Dme-031879	Drosophila melanogaster	45.32	3.00e-82	296.00
IUUC-Ete-032336	Echinops telfairi	40.37	1.00e-39	154.00
IUUC-Eca-033259	Equus caballus	47.43	3.00e-83	300.00
IUUC-Eeu-035153	Erinaceus europaeus	37.93	2.00e-21	94.40
IUUC-Fca-036489	Felis catus	47.43	3.00e-83	300.00
IUUC-Fal-037485	Ficedula albicollis	47.73	6.00e-84	302.00
IUUC-Fox-037860	Fusarium oxysporum	53.01	2.00e-100	357.00
IUUC-Fso-038188	Fusarium solani	52.41	7.00e-97	345.00
IUUC-Gmo-039311	Gadus morhua	45.32	5.00e-81	292.00
IUUC-Ggr-040045	Gaeumannomyces graminis	52.71	1.00e-101	361.00
IUUC-Gga-040645	Gallus gallus	46.47	7.00e-82	295.00
IUUC-Gac-042086	Gasterosteus aculeatus	45.78	3.00e-81	293.00
IUUC-Gma-043930	Glycine max	44.64	5.00e-79	285.00
IUUC-Ggo-045578	Gorilla gorilla	47.59	4.00e-84	302.00
IUUC-Hsa-046734	Homo sapiens	47.59	4.00e-84	302.00
IUUC-Hvu-047553	Hordeum vulgare	42.86	8.00e-74	268.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	47.13	6.00e-83	298.00
IUUC-Kpa-049325	Komagataella pastoris	47.46	2.00e-86	310.00
IUUC-Lch-049620	Latimeria chalumnae	46.30	1.00e-74	271.00
IUUC-Lpe-051338	Leersia perrieri	42.55	6.00e-71	259.00
IUUC-Loc-052094	Lepisosteus oculatus	41.99	3.00e-69	253.00
IUUC-Lma-053047	Leptosphaeria maculans	54.95	1.00e-104	370.00
IUUC-Laf-053801	Loxodonta africana	46.93	6.00e-81	292.00
IUUC-Mcc-055498	Macaca mulatta	41.27	9.00e-65	238.00
IUUC-Meu-056729	Macropus eugenii	44.44	1.00e-73	267.00
IUUC-Mor-057025	Magnaporthe oryzae	53.01	1.00e-100	357.00
IUUC-Mpo-057511	Magnaporthe poae	53.31	1.00e-101	360.00
IUUC-Mtr-058051	Medicago truncatula	44.05	9.00e-78	281.00
IUUC-Mla-059061	Melampsora laricipopulina	66.57	1.00e-133	467.00
IUUC-Mga-059229	Meleagris gallopavo	46.85	7.00e-81	291.00
IUUC-Mmr-060764	Microcebus murinus	47.89	8.00e-85	305.00
IUUC-Mdo-062088	Monodelphis domestica	47.29	5.00e-82	295.00
IUUC-Mmu-064304	Mus musculus	47.29	5.00e-84	302.00
IUUC-Mac-065520	Musa acuminata	43.81	4.00e-78	283.00
IUUC-Mpu-066340	Mustela putorius furo	47.43	3.00e-83	300.00
IUUC-Mlu-067111	Myotis lucifugus	47.43	1.00e-83	301.00
IUUC-Nfi-068478	Neosartorya fischeri	53.12	1.00e-100	357.00
IUUC-Ncr-068820	Neurospora crassa	54.82	3.00e-102	363.00
IUUC-Nle-069903	Nomascus leucogenys	47.43	3.00e-83	300.00
IUUC-Opr-070221	Ochotona princeps	46.99	1.00e-82	297.00
IUUC-Ont-071765	Oreochromis niloticus	45.48	3.00e-82	296.00
IUUC-Oan-073660	Ornithorhynchus anatinus	44.33	5.00e-68	249.00
IUUC-Ocu-074039	Oryctolagus cuniculus	47.43	2.00e-83	300.00
IUUC-Oba-075395	Oryza barthii	38.99	8.00e-63	231.00
IUUC-Obr-076334	Oryza brachyantha	41.07	1.00e-69	254.00
IUUC-Ogl-077751	Oryza glaberrima	43.45	6.00e-77	278.00
IUUC-Ogu-078207	Oryza glumaepatula	43.75	4.00e-78	283.00
IUUC-Oin-079878	Oryza indica	43.75	3.00e-78	283.00
IUUC-Olo-080677	Oryza longistaminata	37.95	1.00e-69	255.00
IUUC-Ome-081228	Oryza meridionalis	35.91	9.00e-39	151.00
IUUC-Oni-082411	Oryza nivara	37.90	3.00e-60	223.00
IUUC-Opu-083136	Oryza punctata	43.15	2.00e-76	277.00
IUUC-Oru-084916	Oryza rufipogon	42.90	6.00e-77	279.00
IUUC-Osa-085454	Oryza sativa	43.75	3.00e-78	283.00
IUUC-Ola-087053	Oryzias latipes	45.78	2.00e-81	293.00
IUUC-Olu-087602	Ostreococcus lucimarinus	41.87	3.00e-78	283.00
IUUC-Oga-088154	Otolemur garnettii	47.43	1.00e-83	301.00
IUUC-Oar-089915	Ovis aries	47.43	2.00e-83	300.00
IUUC-Ptr-091124	Pan troglodytes	40.12	4.00e-59	219.00
IUUC-Pan-092035	Papio anubis	47.59	4.00e-84	302.00
IUUC-Psi-094096	Pelodiscus sinensis	44.14	6.00e-47	178.00
IUUC-Pno-094988	Phaeosphaeria nodorum	50.00	7.00e-89	318.00
IUUC-Ppa-095536	Physcomitrella patens	44.05	9.00e-79	285.00
IUUC-Pfo-096101	Poecilia formosa	44.88	3.00e-81	293.00
IUUC-Pab-097726	Pongo abelii	47.59	4.00e-84	302.00
IUUC-Pop-099617	Populus trichocarpa	44.64	3.00e-79	286.00
IUUC-Pca-101014	Procavia capensis	47.59	3.00e-84	303.00
IUUC-Ppe-101320	Prunus persica	44.35	6.00e-77	278.00
IUUC-Pva-102789	Pteropus vampyrus	42.30	3.00e-72	263.00
IUUC-Pgr-103479	Puccinia graminis	66.47	4.00e-136	475.00
IUUC-Ptt-103981	Puccinia triticina	66.76	1.00e-135	474.00
IUUC-Pte-104278	Pyrenophora teres	52.85	2.00e-98	350.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	52.85	2.00e-98	350.00
IUUC-Rno-105867	Rattus norvegicus	41.19	4.00e-68	249.00
IUUC-Sce-106251	Saccharomyces cerevisiae	45.88	1.00e-86	311.00
IUUC-Sha-107039	Sarcophilus harrisii	46.99	8.00e-82	295.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	54.03	8.00e-106	375.00
IUUC-Spo-108314	Schizosaccharomyces pombe	54.93	8.00e-107	378.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	53.61	5.00e-104	369.00
IUUC-Smo-108728	Selaginella moellendorffii	42.39	3.00e-76	276.00
IUUC-Sit-110801	Setaria italica	42.86	7.00e-75	272.00
IUUC-Sly-111326	Solanum lycopersicum	44.14	9.00e-79	285.00
IUUC-Stu-112458	Solanum tuberosum	44.35	2.00e-79	287.00
IUUC-Sbi-114063	Sorghum bicolor	42.26	4.00e-74	269.00
IUUC-Sre-115096	Sporisorium reilianum	59.66	2.00e-111	394.00
IUUC-Ssc-116080	Sus scrofa	47.59	4.00e-84	302.00
IUUC-Tgu-116988	Taeniopygia guttata	47.73	5.00e-84	302.00
IUUC-Tru-118766	Takifugu rubripes	46.08	2.00e-82	296.00
IUUC-Tni-120197	Tetraodon nigroviridis	45.78	2.00e-82	297.00
IUUC-Tca-121316	Theobroma cacao	44.94	4.00e-79	286.00
IUUC-Tre-122097	Trichoderma reesei	53.61	2.00e-102	363.00
IUUC-Tvi-122442	Trichoderma virens	53.92	4.00e-102	362.00
IUUC-Tae-125800	Triticum aestivum	42.56	3.00e-73	267.00
IUUC-Tur-126334	Triticum urartu	36.31	5.00e-54	202.00
IUUC-Tme-127038	Tuber melanosporum	58.13	3.00e-109	386.00
IUUC-Ttr-128659	Tursiops truncatus	44.28	8.00e-67	245.00
IUUC-Uma-129464	Ustilago maydis	61.36	2.00e-114	404.00
IUUC-Vda-129841	Verticillium dahliae	55.12	3.00e-105	372.00
IUUC-Vvi-131076	Vitis vinifera	44.35	6.00e-79	285.00
IUUC-Xtr-132395	Xenopus tropicalis	47.45	4.00e-83	299.00
IUUC-Xma-133383	Xiphophorus maculatus	44.88	5.00e-81	292.00
IUUC-Yli-134586	Yarrowia lipolytica	47.60	5.00e-84	302.00
IUUC-Zma-135904	Zea mays	43.15	1.00e-75	274.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence