iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pma-094488

Ensembl Protein ID

ENSPMAP00000007665.1

UniProt Accession

S4RR29; S4RR29_PETMA

Protein Name

Eukaryotic translation initiation factor 3 subunit F; Eukaryotic translation initiation factor 3 subunit 5

Gene Name

eif3f; EIF3F; EIF3S5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000006918.1	ENSPMAT00000007699.1	ENSPMAP00000007665.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	72.35	4.00e-123	438.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Petromyzon marinus

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

AVRNSGAGPL QIPASMAVFG PVVRIHPVVL FSVVDSYERR NEDAKRVIGT LLGTVDKQNV 60
EVTNCFSVPH NESEDEVAVD MEFAKNMYEL HKKVTPNEQI VGWYATGYDI TEHSVLIHEY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGTTCGTA ATAGTGGTGC AGGCCCGTTG CAAATCCCAC ATCTGACACC GTGACGTCGA 60
GGCGCGGGGC TCCCAAAAGC GCGGGGCTCC CCAAAGCGCG GGGCTCCCCA AAGCGCGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	37.83	6.00e-52	196.00
IUUC-Aml-001527	Ailuropoda melanoleuca	76.40	4.00e-124	436.00
IUUC-Atr-002686	Amborella trichopoda	40.68	8.00e-52	195.00
IUUC-Apl-003977	Anas platyrhynchos	75.45	4.00e-104	368.00
IUUC-Aca-004335	Anolis carolinensis	74.35	3.00e-123	432.00
IUUC-Aly-005945	Arabidopsis lyrata	41.73	2.00e-53	200.00
IUUC-Ath-007045	Arabidopsis thaliana	39.92	9.00e-53	198.00
IUUC-Acl-008365	Aspergillus clavatus	34.38	7.00e-45	172.00
IUUC-Afl-008742	Aspergillus flavus	35.07	1.00e-42	165.00
IUUC-Afu-009030	Aspergillus fumigatus	34.03	2.00e-44	171.00
IUUC-Ani-009212	Aspergillus nidulans	34.95	5.00e-46	176.00
IUUC-Ang-009712	Aspergillus niger	34.80	3.00e-44	171.00
IUUC-Aor-009885	Aspergillus oryzae	35.07	8.00e-46	176.00
IUUC-Ate-010315	Aspergillus terreus	34.72	1.00e-41	162.00
IUUC-Ame-010801	Astyanax mexicanus	49.65	7.00e-68	248.00
IUUC-Bgr-011982	Blumeria graminis	34.05	6.00e-43	166.00
IUUC-Bta-012804	Bos taurus	76.58	1.00e-124	437.00
IUUC-Bci-013891	Botrytis cinerea	36.27	3.00e-39	154.00
IUUC-Bdi-014328	Brachypodium distachyon	38.46	1.00e-50	191.00
IUUC-Bol-015446	Brassica oleracea	39.54	9.00e-53	198.00
IUUC-Bra-016862	Brassica rapa	41.35	6.00e-53	199.00
IUUC-Cel-018171	Caenorhabditis elegans	34.84	1.00e-47	181.00
IUUC-Cja-019335	Callithrix jacchus	76.21	2.00e-124	437.00
IUUC-Cfa-020138	Canis familiaris	76.03	2.00e-123	433.00
IUUC-Cpo-022109	Cavia porcellus	66.79	5.00e-105	372.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	42.54	1.00e-64	238.00
IUUC-Csa-023994	Chlorocebus sabaeus	76.21	3.00e-124	436.00
IUUC-Cho-024351	Choloepus hoffmanni	57.25	2.00e-83	300.00
IUUC-Cin-025801	Ciona intestinalis	57.46	4.00e-91	325.00
IUUC-Csv-025805	Ciona savignyi	57.09	1.00e-90	324.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	30.53	1.00e-38	152.00
IUUC-Cne-026868	Cryptococcus neoformans	30.55	4.00e-34	136.00
IUUC-Cme-027328	Cyanidioschyzon merolae	26.73	6.00e-25	106.00
IUUC-Dre-028085	Danio rerio	76.19	3.00e-126	442.00
IUUC-Dno-030099	Dasypus novemcinctus	76.03	1.00e-123	434.00
IUUC-Dor-030324	Dipodomys ordii	68.16	1.00e-106	378.00
IUUC-Dse-031314	Dothistroma septosporum	35.69	2.00e-50	191.00
IUUC-Dme-031926	Drosophila melanogaster	50.90	2.00e-86	310.00
IUUC-Ete-032569	Echinops telfairi	71.00	1.00e-114	404.00
IUUC-Eca-033502	Equus caballus	73.23	1.00e-116	411.00
IUUC-Eeu-034883	Erinaceus europaeus	58.38	1.00e-58	217.00
IUUC-Fca-035873	Felis catus	76.40	6.00e-124	435.00
IUUC-Fal-036921	Ficedula albicollis	76.58	2.00e-126	443.00
IUUC-Fox-037765	Fusarium oxysporum	32.61	1.00e-33	135.00
IUUC-Fso-038240	Fusarium solani	33.45	2.00e-36	144.00
IUUC-Gmo-038864	Gadus morhua	75.09	2.00e-127	446.00
IUUC-Ggr-039862	Gaeumannomyces graminis	32.14	2.00e-31	128.00
IUUC-Gga-040952	Gallus gallus	76.21	1.00e-125	441.00
IUUC-Gac-041677	Gasterosteus aculeatus	74.39	1.00e-129	454.00
IUUC-Gma-043061	Glycine max	41.44	1.00e-50	191.00
IUUC-Ggo-045591	Gorilla gorilla	76.21	2.00e-124	437.00
IUUC-Hsa-046860	Homo sapiens	76.21	3.00e-124	436.00
IUUC-Hvu-047410	Hordeum vulgare	31.51	5.00e-22	95.10
IUUC-Itr-048211	Ictidomys tridecemlineatus	76.03	2.00e-123	434.00
IUUC-Lch-049410	Latimeria chalumnae	65.71	1.00e-77	281.00
IUUC-Lpe-051102	Leersia perrieri	40.23	9.00e-51	192.00
IUUC-Loc-052016	Lepisosteus oculatus	70.70	2.00e-114	403.00
IUUC-Lma-053157	Leptosphaeria maculans	34.34	2.00e-49	187.00
IUUC-Laf-054568	Loxodonta africana	75.84	8.00e-124	435.00
IUUC-Mcc-054613	Macaca mulatta	76.21	2.00e-124	437.00
IUUC-Meu-056832	Macropus eugenii	56.67	8.00e-64	234.00
IUUC-Mor-057104	Magnaporthe oryzae	32.51	2.00e-35	141.00
IUUC-Mtr-058445	Medicago truncatula	42.21	9.00e-63	231.00
IUUC-Mla-059038	Melampsora laricipopulina	29.14	4.00e-33	133.00
IUUC-Mga-059548	Meleagris gallopavo	75.85	5.00e-110	388.00
IUUC-Mvi-060520	Microbotryum violaceum	27.36	2.00e-22	98.20
IUUC-Mdo-062376	Monodelphis domestica	76.40	1.00e-124	437.00
IUUC-Mmu-063254	Mus musculus	76.40	2.00e-123	434.00
IUUC-Mac-065635	Musa acuminata	41.28	8.00e-56	208.00
IUUC-Mpu-066314	Mustela putorius furo	76.40	6.00e-124	435.00
IUUC-Mlu-067512	Myotis lucifugus	76.40	3.00e-124	436.00
IUUC-Nfi-068262	Neosartorya fischeri	34.03	1.00e-44	171.00
IUUC-Ncr-068872	Neurospora crassa	32.00	4.00e-33	134.00
IUUC-Nle-070118	Nomascus leucogenys	76.40	6.00e-124	435.00
IUUC-Opr-071228	Ochotona princeps	76.17	9.00e-109	384.00
IUUC-Ont-072600	Oreochromis niloticus	77.70	6.00e-129	451.00
IUUC-Oan-073584	Ornithorhynchus anatinus	75.42	8.00e-110	387.00
IUUC-Ocu-074542	Oryctolagus cuniculus	76.78	1.00e-124	437.00
IUUC-Oba-075923	Oryza barthii	40.30	9.00e-53	198.00
IUUC-Obr-076313	Oryza brachyantha	40.23	1.00e-51	195.00
IUUC-Ogl-076932	Oryza glaberrima	40.30	9.00e-53	198.00
IUUC-Ogu-078152	Oryza glumaepatula	40.30	9.00e-53	198.00
IUUC-Oin-079528	Oryza indica	40.30	9.00e-53	198.00
IUUC-Olo-080401	Oryza longistaminata	40.30	9.00e-53	198.00
IUUC-Ome-081553	Oryza meridionalis	40.68	4.00e-53	199.00
IUUC-Oni-082090	Oryza nivara	40.30	1.00e-52	198.00
IUUC-Opu-083583	Oryza punctata	40.23	4.00e-51	193.00
IUUC-Oru-084492	Oryza rufipogon	40.30	9.00e-53	198.00
IUUC-Osa-085383	Oryza sativa	40.30	9.00e-53	198.00
IUUC-Ola-086835	Oryzias latipes	75.55	3.00e-128	449.00
IUUC-Olu-087716	Ostreococcus lucimarinus	30.83	3.00e-31	127.00
IUUC-Oga-088886	Otolemur garnettii	76.40	3.00e-124	436.00
IUUC-Oar-090079	Ovis aries	76.58	1.00e-124	437.00
IUUC-Ptr-091457	Pan troglodytes	76.21	3.00e-124	436.00
IUUC-Pan-092317	Papio anubis	71.89	2.00e-78	283.00
IUUC-Psi-093129	Pelodiscus sinensis	72.37	1.00e-111	394.00
IUUC-Pno-095049	Phaeosphaeria nodorum	34.36	2.00e-49	187.00
IUUC-Ppa-095341	Physcomitrella patens	38.79	3.00e-63	233.00
IUUC-Pfo-096286	Poecilia formosa	75.62	3.00e-130	456.00
IUUC-Pab-097765	Pongo abelii	76.21	3.00e-124	436.00
IUUC-Pop-099131	Populus trichocarpa	40.68	4.00e-57	213.00
IUUC-Pca-100524	Procavia capensis	62.39	3.00e-81	293.00
IUUC-Ppe-101934	Prunus persica	41.44	4.00e-62	229.00
IUUC-Pva-102577	Pteropus vampyrus	75.66	5.00e-123	432.00
IUUC-Pgr-103521	Puccinia graminis	27.52	2.00e-31	128.00
IUUC-Pte-104304	Pyrenophora teres	35.14	7.00e-50	189.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	35.47	1.00e-50	191.00
IUUC-Rno-105717	Rattus norvegicus	76.40	2.00e-123	434.00
IUUC-Sha-107190	Sarcophilus harrisii	76.63	9.00e-122	428.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	33.21	2.00e-44	170.00
IUUC-Spo-108355	Schizosaccharomyces pombe	33.57	9.00e-45	172.00
IUUC-Smo-109374	Selaginella moellendorffii	42.22	2.00e-67	247.00
IUUC-Sit-110119	Setaria italica	40.68	7.00e-53	199.00
IUUC-Sly-111570	Solanum lycopersicum	38.82	1.00e-48	185.00
IUUC-Stu-112308	Solanum tuberosum	39.24	1.00e-54	205.00
IUUC-Sar-113515	Sorex araneus	77.11	4.00e-36	142.00
IUUC-Sbi-114605	Sorghum bicolor	41.44	2.00e-53	201.00
IUUC-Sre-114906	Sporisorium reilianum	38.91	2.00e-56	210.00
IUUC-Tgu-117087	Taeniopygia guttata	74.58	4.00e-108	382.00
IUUC-Tru-117700	Takifugu rubripes	73.05	2.00e-127	446.00
IUUC-Tni-120470	Tetraodon nigroviridis	76.56	6.00e-129	451.00
IUUC-Tca-121109	Theobroma cacao	39.92	3.00e-49	186.00
IUUC-Tre-122095	Trichoderma reesei	33.33	8.00e-36	142.00
IUUC-Tvi-122580	Trichoderma virens	32.97	4.00e-35	140.00
IUUC-Tae-125129	Triticum aestivum	39.72	2.00e-55	207.00
IUUC-Tur-126658	Triticum urartu	36.33	1.00e-45	174.00
IUUC-Tme-127043	Tuber melanosporum	35.42	2.00e-51	194.00
IUUC-Tbe-127927	Tupaia belangeri	76.40	6.00e-124	435.00
IUUC-Ttr-129231	Tursiops truncatus	76.78	2.00e-124	436.00
IUUC-Uma-129578	Ustilago maydis	39.93	2.00e-56	211.00
IUUC-Vda-129730	Verticillium dahliae	30.93	2.00e-40	157.00
IUUC-Vpa-130677	Vicugna pacos	42.34	4.00e-24	103.00
IUUC-Vvi-130968	Vitis vinifera	42.59	3.00e-59	219.00
IUUC-Xtr-132203	Xenopus tropicalis	75.84	8.00e-125	437.00
IUUC-Xma-133972	Xiphophorus maculatus	76.19	7.00e-129	451.00
IUUC-Yli-134553	Yarrowia lipolytica	37.83	2.00e-44	170.00
IUUC-Zma-134941	Zea mays	41.44	1.00e-49	188.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence