iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017275

Ensembl Protein ID

Bra033374.1-P

UniProt Accession

M4EX39; M4EX39_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra033374	Bra033374.1	Bra033374.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-13	50.2	120	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvll 36
           gH + vtc+af      + ++l sGs+D t+++WD+++g ll
   Q: 120  GHREFVTCIAFvwnpelPQKYLMSGSGDSTVRLWDVTSGSLL 161
           79999*********8876699*****************9876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNKDSIRAIR YGASGKLFVS AGDMTSSSRF GLQSLGIALT PFRCYSVWVV ELDGIDEGEV 60
LPSKKGAPLL SHYCSIIPSL EFSPDGRYIL SADRDFKIRV TVFPKKPLQG AHEIQTFCLG 120

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Nucleotide Sequence
(Fasta)

ATGAATAAGG ATTCCATTAG AGCTATTCGA TATGGTGCAA GTGGAAAGCT CTTTGTGTCT 60
GCGGGAGATA TGACAAGCTC GTCAAGATTT GGTCTGCAGA GTCTTGGCAT TGCCTTAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence