iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022163

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02032289

Gene Name

VPS41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000006142.3	ENSCPOT00000006206.2	ENSCPOP00000005539.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	97.22	0.00e+00	1666.00	IUUC-Hsa-047030

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Cavia porcellus

Protein Sequence
(Fasta)

QETGSLEEST DESEEEESEE EPKLKYERLS NGVTEILQKD AASCMTVHDK FLALGTHYGK 60
VYLLDVQGNI TQKFDVSPVK INQISLDESG EHMGVCSEDG KVQVFGLYSG EEFHETFDCP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGAAACTG GGTCTCTTGA AGAATCTACA GATGAGTCTG AGGTAAGGTG GTGGCAATTC 60
AGGAGCCTTA AGATTGTCAC CCACAGTGAT CCTGTCTTGT GCTCGCTCTG GTTTGCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR011990--TPR-like_helical_dom
IPR016902--VPS41
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR
PS50089--ZF_RING_2

Pfam

PF00637--Clathrin

SMART

SM00299--CLH

Gene Ontology

GO:0030123--C:AP-3 adaptor complex
GO:0071439--C:clathrin complex
GO:0030136--C:clathrin-coated vesicle
GO:0005769--C:early endosome
GO:0030897--C:HOPS complex
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0015630--C:microtubule cytoskeleton
GO:0008270--F:zinc ion binding
GO:0034058--P:endosomal vesicle fusion
GO:0008333--P:endosome to lysosome transport
GO:0006886--P:intracellular protein transport
GO:1902774--P:late endosome to lysosome transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000207	Aegilops tauschii	34.73	1.00e-135	477.00
IUUC-Aml-001435	Ailuropoda melanoleuca	95.89	0.00e+00	1645.00
IUUC-Atr-002975	Amborella trichopoda	36.84	3.00e-160	559.00
IUUC-Apl-003254	Anas platyrhynchos	90.92	0.00e+00	1580.00
IUUC-Aca-005067	Anolis carolinensis	89.12	0.00e+00	1547.00
IUUC-Aly-005839	Arabidopsis lyrata	35.63	8.00e-156	544.00
IUUC-Ath-006625	Arabidopsis thaliana	35.51	4.00e-156	545.00
IUUC-Ago-007960	Ashbya gossypii	24.97	6.00e-69	255.00
IUUC-Acl-008174	Aspergillus clavatus	29.54	2.00e-54	207.00
IUUC-Afl-008524	Aspergillus flavus	41.99	5.00e-38	153.00
IUUC-Afu-009054	Aspergillus fumigatus	29.08	2.00e-58	221.00
IUUC-Ani-009250	Aspergillus nidulans	27.21	3.00e-47	184.00
IUUC-Ang-009665	Aspergillus niger	28.78	5.00e-56	213.00
IUUC-Aor-010230	Aspergillus oryzae	41.99	5.00e-38	153.00
IUUC-Ate-010464	Aspergillus terreus	40.86	1.00e-39	159.00
IUUC-Ame-011311	Astyanax mexicanus	67.78	0.00e+00	1135.00
IUUC-Bgr-012099	Blumeria graminis	25.90	1.00e-49	192.00
IUUC-Bta-013327	Bos taurus	96.01	0.00e+00	1648.00
IUUC-Bci-013660	Botrytis cinerea	27.56	3.00e-50	194.00
IUUC-Bdi-014641	Brachypodium distachyon	36.44	2.00e-149	523.00
IUUC-Bol-015685	Brassica oleracea	35.45	9.00e-156	544.00
IUUC-Bra-016918	Brassica rapa	35.09	5.00e-154	538.00
IUUC-Cel-018385	Caenorhabditis elegans	28.55	7.00e-91	328.00
IUUC-Cja-018994	Callithrix jacchus	96.73	0.00e+00	1652.00
IUUC-Cfa-020405	Canis familiaris	96.74	0.00e+00	1654.00
IUUC-Cre-022626	Chlamydomonas reinhardtii	27.75	1.00e-41	164.00
IUUC-Csa-023134	Chlorocebus sabaeus	97.22	0.00e+00	1664.00
IUUC-Cho-024913	Choloepus hoffmanni	84.71	0.00e+00	1361.00
IUUC-Cin-025239	Ciona intestinalis	44.02	0.00e+00	706.00
IUUC-Cgl-026706	Colletotrichum gloeosporioides	29.10	5.00e-53	203.00
IUUC-Cne-026799	Cryptococcus neoformans	36.78	1.00e-164	574.00
IUUC-Cme-027200	Cyanidioschyzon merolae	24.10	2.00e-10	61.20
IUUC-Dre-028115	Danio rerio	82.47	0.00e+00	1427.00
IUUC-Dor-030947	Dipodomys ordii	90.44	0.00e+00	1519.00
IUUC-Dse-031544	Dothistroma septosporum	25.72	7.00e-46	179.00
IUUC-Dme-031830	Drosophila melanogaster	37.89	7.00e-156	544.00
IUUC-Ete-033051	Echinops telfairi	93.41	2.00e-142	499.00
IUUC-Eca-033501	Equus caballus	96.74	0.00e+00	1656.00
IUUC-Eeu-034555	Erinaceus europaeus	91.11	0.00e+00	874.00
IUUC-Fca-035809	Felis catus	95.89	0.00e+00	1646.00
IUUC-Fal-037056	Ficedula albicollis	91.66	0.00e+00	1583.00
IUUC-Fox-037949	Fusarium oxysporum	27.72	2.00e-48	188.00
IUUC-Fso-038282	Fusarium solani	26.35	1.00e-45	178.00
IUUC-Gmo-038540	Gadus morhua	80.77	0.00e+00	1386.00
IUUC-Ggr-039733	Gaeumannomyces graminis	25.98	3.00e-54	207.00
IUUC-Gga-040446	Gallus gallus	91.54	0.00e+00	1581.00
IUUC-Gac-041462	Gasterosteus aculeatus	82.83	0.00e+00	1409.00
IUUC-Gma-043148	Glycine max	36.58	9.00e-163	567.00
IUUC-Hsa-047030	Homo sapiens	97.22	0.00e+00	1666.00
IUUC-Hvu-047693	Hordeum vulgare	35.97	8.00e-148	517.00
IUUC-Itr-048318	Ictidomys tridecemlineatus	97.17	0.00e+00	1637.00
IUUC-Kpa-049224	Komagataella pastoris	23.88	2.00e-55	211.00
IUUC-Lch-049444	Latimeria chalumnae	80.97	0.00e+00	1369.00
IUUC-Lpe-050942	Leersia perrieri	34.41	6.00e-130	458.00
IUUC-Loc-052260	Lepisosteus oculatus	81.04	0.00e+00	1415.00
IUUC-Lma-053173	Leptosphaeria maculans	26.79	2.00e-49	191.00
IUUC-Laf-054185	Loxodonta africana	96.86	0.00e+00	1655.00
IUUC-Mcc-054816	Macaca mulatta	97.22	0.00e+00	1664.00
IUUC-Meu-056483	Macropus eugenii	72.48	0.00e+00	646.00
IUUC-Mor-056979	Magnaporthe oryzae	27.39	5.00e-53	203.00
IUUC-Mpo-057312	Magnaporthe poae	26.11	4.00e-54	207.00
IUUC-Mtr-057630	Medicago truncatula	35.97	1.00e-159	557.00
IUUC-Mla-058930	Melampsora laricipopulina	32.04	3.00e-25	107.00
IUUC-Mga-059942	Meleagris gallopavo	91.06	0.00e+00	1568.00
IUUC-Mvi-060386	Microbotryum violaceum	35.96	5.00e-157	548.00
IUUC-Mmr-060640	Microcebus murinus	97.46	0.00e+00	1669.00
IUUC-Mdo-062934	Monodelphis domestica	84.87	0.00e+00	1405.00
IUUC-Mmu-063488	Mus musculus	96.49	0.00e+00	1660.00
IUUC-Mac-064975	Musa acuminata	36.96	5.00e-155	541.00
IUUC-Mpu-065777	Mustela putorius furo	96.74	0.00e+00	1659.00
IUUC-Mlu-068052	Myotis lucifugus	95.54	0.00e+00	1641.00
IUUC-Nfi-068436	Neosartorya fischeri	37.66	3.00e-42	167.00
IUUC-Ncr-068840	Neurospora crassa	29.32	3.00e-58	220.00
IUUC-Nle-070063	Nomascus leucogenys	96.86	0.00e+00	1655.00
IUUC-Opr-070385	Ochotona princeps	86.68	0.00e+00	1441.00
IUUC-Ont-072367	Oreochromis niloticus	82.00	0.00e+00	1397.00
IUUC-Oan-073085	Ornithorhynchus anatinus	90.46	0.00e+00	1550.00
IUUC-Ocu-074672	Oryctolagus cuniculus	96.98	0.00e+00	1657.00
IUUC-Oba-075574	Oryza barthii	36.90	1.00e-154	540.00
IUUC-Obr-076203	Oryza brachyantha	37.02	8.00e-154	538.00
IUUC-Ogl-077909	Oryza glaberrima	36.90	1.00e-154	540.00
IUUC-Ogu-078053	Oryza glumaepatula	36.48	9.00e-152	531.00
IUUC-Oin-079700	Oryza indica	36.90	2.00e-154	539.00
IUUC-Olo-080707	Oryza longistaminata	37.54	1.00e-160	560.00
IUUC-Oni-082754	Oryza nivara	36.82	2.00e-153	536.00
IUUC-Opu-083854	Oryza punctata	36.82	3.00e-153	536.00
IUUC-Oru-085071	Oryza rufipogon	36.59	1.00e-152	534.00
IUUC-Osa-085370	Oryza sativa	36.90	1.00e-154	540.00
IUUC-Ola-086362	Oryzias latipes	79.90	0.00e+00	1364.00
IUUC-Oga-088078	Otolemur garnettii	97.44	0.00e+00	1656.00
IUUC-Oar-089679	Ovis aries	96.13	0.00e+00	1650.00
IUUC-Ptr-091680	Pan troglodytes	97.22	0.00e+00	1666.00
IUUC-Pan-092816	Papio anubis	97.47	0.00e+00	1185.00
IUUC-Psi-093890	Pelodiscus sinensis	90.93	0.00e+00	1574.00
IUUC-Pma-094654	Petromyzon marinus	65.01	0.00e+00	1121.00
IUUC-Pno-095071	Phaeosphaeria nodorum	28.06	2.00e-57	218.00
IUUC-Ppa-095198	Physcomitrella patens	33.98	2.00e-144	506.00
IUUC-Pfo-097465	Poecilia formosa	80.53	0.00e+00	1379.00
IUUC-Pab-098686	Pongo abelii	97.10	0.00e+00	1665.00
IUUC-Pop-100066	Populus trichocarpa	35.95	3.00e-159	555.00
IUUC-Pca-100990	Procavia capensis	85.97	0.00e+00	1432.00
IUUC-Ppe-101500	Prunus persica	37.11	1.00e-162	566.00
IUUC-Pva-102809	Pteropus vampyrus	96.25	0.00e+00	1655.00
IUUC-Pgr-103404	Puccinia graminis	33.08	2.00e-142	500.00
IUUC-Ptt-103952	Puccinia triticina	31.52	3.00e-131	463.00
IUUC-Pte-104216	Pyrenophora teres	28.10	3.00e-57	217.00
IUUC-Rno-105949	Rattus norvegicus	96.88	0.00e+00	1483.00
IUUC-Sce-106462	Saccharomyces cerevisiae	24.72	7.00e-58	219.00
IUUC-Sha-106689	Sarcophilus harrisii	92.26	0.00e+00	1601.00
IUUC-Sja-107696	Schizosaccharomyces japonicus	30.28	6.00e-97	348.00
IUUC-Spo-108173	Schizosaccharomyces pombe	29.40	3.00e-105	376.00
IUUC-Smo-109505	Selaginella moellendorffii	37.50	4.00e-150	525.00
IUUC-Sit-110176	Setaria italica	36.27	5.00e-158	551.00
IUUC-Sly-111671	Solanum lycopersicum	35.32	1.00e-161	563.00
IUUC-Sar-113073	Sorex araneus	82.17	0.00e+00	1271.00
IUUC-Sbi-114139	Sorghum bicolor	37.07	1.00e-151	530.00
IUUC-Sre-115158	Sporisorium reilianum	35.90	3.00e-164	573.00
IUUC-Ssc-115894	Sus scrofa	95.04	0.00e+00	1626.00
IUUC-Tgu-117481	Taeniopygia guttata	91.29	0.00e+00	1580.00
IUUC-Tru-118468	Takifugu rubripes	80.10	0.00e+00	1373.00
IUUC-Tni-120478	Tetraodon nigroviridis	79.73	0.00e+00	1364.00
IUUC-Tca-121780	Theobroma cacao	36.31	2.00e-160	559.00
IUUC-Tre-121900	Trichoderma reesei	28.18	3.00e-55	211.00
IUUC-Tvi-122343	Trichoderma virens	27.88	1.00e-55	212.00
IUUC-Tae-123578	Triticum aestivum	36.84	7.00e-151	528.00
IUUC-Tur-126430	Triticum urartu	36.08	3.00e-142	499.00
IUUC-Tme-127007	Tuber melanosporum	28.66	1.00e-61	232.00
IUUC-Tbe-128073	Tupaia belangeri	87.91	0.00e+00	1477.00
IUUC-Ttr-128879	Tursiops truncatus	95.53	0.00e+00	1631.00
IUUC-Uma-129356	Ustilago maydis	35.14	5.00e-165	575.00
IUUC-Vda-129676	Verticillium dahliae	28.37	2.00e-54	207.00
IUUC-Vvi-131744	Vitis vinifera	35.80	2.00e-158	553.00
IUUC-Xtr-132093	Xenopus tropicalis	80.89	0.00e+00	1387.00
IUUC-Xma-133199	Xiphophorus maculatus	81.26	0.00e+00	1378.00
IUUC-Yli-134385	Yarrowia lipolytica	26.93	1.00e-74	274.00
IUUC-Zma-135567	Zea mays	36.82	2.00e-149	523.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence