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Tag Content
iUUCD ID IUUC-Aly-006476
Ensembl Protein ID fgenesh2_kg.6__2501__AT5G25150.1
UniProt Accession D7M3U9; D7M3U9_ARALL
Genbank Protein ID EFH48400.1
Protein Name Nucleotide binding protein
Genbank Nucleotide ID GL348718
Gene Name TAF5; ARALYDRAFT_489367
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.6__2501__AT5G25150.1 fgenesh2_kg.6__2501__AT5G25150.1 fgenesh2_kg.6__2501__AT5G25150.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.80e-42 141.5 500 538
UBD/Beta-Prp 1.60e-66 225.2 350 658
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+++ ++ +++++Gs D+t+++WD+ tg +++
   Q: 500  GHLSDVDCVQWhPNcNYIATGSSDKTVRLWDVQTGECVR 538
           8***********888*********************986 PP
   

   UBD/Beta-Prp
   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl........................lrslsgheaevtav 58
           ++h+   ++c  +s d+sl+a g+ d++ikvwd+ +                              l gh+++v++ 
   Q: 350  NTHNG--LNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQagsgvlqgendtndqimgpngrrsYTLLLGHSGPVYSA 424
           44554..56677788*******************997778**********************55555********** PP
   S: 59   kfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           +fsp g++ +++s D ti++w+ + +  ++ +kgh++ v++++fsp g++++s shdrt+r+w ++  q l+ + +g
   Q: 425  TFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPFGHYFASCSHDRTARIWSMDRIQPLR-IMAG 500
           ************************************************************************.**** PP
   S: 136  hdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtg 212
           h + v cv++hp++n++++Gs D+tvrlWd++tg+++r + g h ++v sl+++++g++++sg++dgt+ +wdl t 
   Q: 501  HLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIG-HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLLTA 576
           *****************************************9.********************************** PP
   S: 213  ecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn.............ssvisvavlsfg 276
           +c+  l gh++ v+s+  s ++ +l+sgs+D ++++Wd++s++ l++   +n             +++++v +l+f+
   Q: 577  RCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAVEKNgntnrlrslrtfpTKSTPVHALRFS 653
           **************************************999887777666677999999999999999999999999 PP
   S: 277  dnvlv 281
           +++l+
   Q: 654  RRNLL 658
           77765 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MDPEQINEFV VGYLKKKGFN SAAKDLESYH HHNNNGSSFT STDYHNDPDL TKLIRSFSQQ 60
EDDPTRYREG YSNLRSWAYN SLDLYKHELL RVMYPVFIHC YMDLVGKGHT QEARGFFNSF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-006476|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATCGAGAGAG AGAGAGAAGC GAGAACAATA ATGGATCCAG AGCAAATCAA CGAGTTCGTT 60
GTGGGTTACT TGAAGAAGAA AGGATTCAAT AGCGCTGCTA AAGACCTTGA ATCTTATCAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-006476|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04494--TFIID_NTD2
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
KEGG aly:ARALYDRAFT_489367
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000851 Aegilops tauschii 63.52 4.00e-178 616.00
IUUC-Aml-001607 Ailuropoda melanoleuca 46.21 6.00e-96 344.00
IUUC-Atr-003136 Amborella trichopoda 68.50 0.00e+00 908.00
IUUC-Apl-004193 Anas platyrhynchos 45.29 1.00e-94 340.00
IUUC-Aca-004522 Anolis carolinensis 38.65 6.00e-120 424.00
IUUC-Ath-006587 Arabidopsis thaliana 95.07 0.00e+00 1270.00
IUUC-Ago-007736 Ashbya gossypii 33.10 3.00e-106 379.00
IUUC-Acl-008092 Aspergillus clavatus 31.72 2.00e-93 335.00
IUUC-Afl-008659 Aspergillus flavus 31.37 3.00e-92 332.00
IUUC-Afu-008902 Aspergillus fumigatus 39.28 2.00e-75 276.00
IUUC-Ani-009462 Aspergillus nidulans 32.59 4.00e-78 285.00
IUUC-Aor-010083 Aspergillus oryzae 31.78 3.00e-92 332.00
IUUC-Ate-010271 Aspergillus terreus 31.56 3.00e-91 328.00
IUUC-Ame-010721 Astyanax mexicanus 46.33 5.00e-94 338.00
IUUC-Bgr-012257 Blumeria graminis 30.87 7.00e-88 317.00
IUUC-Bta-013539 Bos taurus 46.21 4.00e-96 345.00
IUUC-Bci-013737 Botrytis cinerea 30.14 3.00e-84 305.00
IUUC-Bdi-015041 Brachypodium distachyon 66.11 0.00e+00 786.00
IUUC-Bol-015483 Brassica oleracea 92.08 0.00e+00 1229.00
IUUC-Bra-017147 Brassica rapa 92.23 0.00e+00 1231.00
IUUC-Cel-018451 Caenorhabditis elegans 27.69 2.00e-60 226.00
IUUC-Cja-018881 Callithrix jacchus 46.34 8.00e-96 344.00
IUUC-Cfa-020056 Canis familiaris 46.21 6.00e-96 344.00
IUUC-Cpo-021454 Cavia porcellus 38.01 2.00e-121 429.00
IUUC-Cre-022736 Chlamydomonas reinhardtii 39.27 5.00e-63 234.00
IUUC-Csa-023045 Chlorocebus sabaeus 46.21 1.00e-95 343.00
IUUC-Cho-024284 Choloepus hoffmanni 46.49 8.00e-79 287.00
IUUC-Cin-025457 Ciona intestinalis 51.54 8.00e-74 269.00
IUUC-Csv-025882 Ciona savignyi 42.35 2.00e-79 289.00
IUUC-Cgl-026392 Colletotrichum gloeosporioides 28.72 4.00e-77 281.00
IUUC-Cne-026876 Cryptococcus neoformans 31.98 8.00e-80 291.00
IUUC-Cme-027302 Cyanidioschyzon merolae 36.59 1.00e-115 409.00
IUUC-Dre-027980 Danio rerio 47.85 1.00e-94 340.00
IUUC-Dno-028863 Dasypus novemcinctus 46.34 8.00e-96 344.00
IUUC-Dor-030561 Dipodomys ordii 46.21 5.00e-96 344.00
IUUC-Dse-031547 Dothistroma septosporum 30.69 2.00e-89 323.00
IUUC-Dme-031917 Drosophila melanogaster 43.14 3.00e-81 295.00
IUUC-Ete-032712 Echinops telfairi 39.89 2.00e-71 262.00
IUUC-Eca-033927 Equus caballus 38.83 2.00e-121 429.00
IUUC-Eeu-034449 Erinaceus europaeus 47.09 4.00e-88 318.00
IUUC-Fca-036325 Felis catus 46.34 5.00e-96 345.00
IUUC-Fal-036604 Ficedula albicollis 45.31 7.00e-94 337.00
IUUC-Fox-038049 Fusarium oxysporum 26.81 2.00e-62 233.00
IUUC-Fso-038302 Fusarium solani 29.01 9.00e-70 257.00
IUUC-Gmo-038832 Gadus morhua 44.92 1.00e-89 323.00
IUUC-Ggr-039878 Gaeumannomyces graminis 29.29 7.00e-74 271.00
IUUC-Gga-041147 Gallus gallus 38.50 6.00e-120 424.00
IUUC-Gac-041373 Gasterosteus aculeatus 44.47 6.00e-92 331.00
IUUC-Gma-043817 Glycine max 72.28 0.00e+00 961.00
IUUC-Ggo-044568 Gorilla gorilla 40.05 3.00e-72 265.00
IUUC-Hsa-045971 Homo sapiens 46.34 6.00e-96 344.00
IUUC-Hvu-047695 Hordeum vulgare 68.10 1.00e-177 615.00
IUUC-Itr-048400 Ictidomys tridecemlineatus 46.21 1.00e-95 343.00
IUUC-Kpa-049402 Komagataella pastoris 35.47 9.00e-116 410.00
IUUC-Lch-049526 Latimeria chalumnae 42.11 1.00e-84 306.00
IUUC-Lpe-051560 Leersia perrieri 63.44 0.00e+00 794.00
IUUC-Loc-052882 Lepisosteus oculatus 46.05 2.00e-92 332.00
IUUC-Lma-053212 Leptosphaeria maculans 38.73 5.00e-65 241.00
IUUC-Laf-053859 Loxodonta africana 46.21 8.00e-96 344.00
IUUC-Mcc-054957 Macaca mulatta 46.34 2.00e-95 342.00
IUUC-Meu-056182 Macropus eugenii 40.72 2.00e-69 256.00
IUUC-Mor-057024 Magnaporthe oryzae 28.83 2.00e-68 253.00
IUUC-Mpo-057520 Magnaporthe poae 30.30 1.00e-71 263.00
IUUC-Mtr-058754 Medicago truncatula 72.32 0.00e+00 1001.00
IUUC-Mla-058881 Melampsora laricipopulina 39.58 6.00e-75 275.00
IUUC-Mga-059776 Meleagris gallopavo 37.79 2.00e-120 425.00
IUUC-Mvi-060208 Microbotryum violaceum 34.21 8.00e-93 334.00
IUUC-Mmr-061783 Microcebus murinus 46.34 2.00e-95 342.00
IUUC-Mdo-062856 Monodelphis domestica 46.34 6.00e-96 344.00
IUUC-Mmu-064218 Mus musculus 46.21 1.00e-95 343.00
IUUC-Mac-064886 Musa acuminata 79.86 9.00e-123 433.00
IUUC-Mpu-065735 Mustela putorius furo 46.21 5.00e-96 344.00
IUUC-Mlu-067544 Myotis lucifugus 46.21 1.00e-94 340.00
IUUC-Nfi-068502 Neosartorya fischeri 39.04 8.00e-76 277.00
IUUC-Ncr-068891 Neurospora crassa 29.95 1.00e-72 267.00
IUUC-Nle-069389 Nomascus leucogenys 46.34 6.00e-96 344.00
IUUC-Opr-070243 Ochotona princeps 40.87 5.00e-74 271.00
IUUC-Ont-071455 Oreochromis niloticus 46.35 3.00e-95 342.00
IUUC-Oan-073181 Ornithorhynchus anatinus 46.21 4.00e-96 344.00
IUUC-Ocu-073758 Oryctolagus cuniculus 39.22 1.00e-121 430.00
IUUC-Oba-075739 Oryza barthii 61.19 0.00e+00 730.00
IUUC-Obr-076111 Oryza brachyantha 67.41 0.00e+00 866.00
IUUC-Ogl-077914 Oryza glaberrima 63.66 0.00e+00 805.00
IUUC-Ogu-078057 Oryza glumaepatula 57.60 0.00e+00 676.00
IUUC-Oin-079473 Oryza indica 64.81 0.00e+00 816.00
IUUC-Olo-080557 Oryza longistaminata 56.80 0.00e+00 644.00
IUUC-Ome-081831 Oryza meridionalis 57.69 0.00e+00 675.00
IUUC-Oni-082441 Oryza nivara 58.66 0.00e+00 686.00
IUUC-Opu-083239 Oryza punctata 57.00 0.00e+00 675.00
IUUC-Oru-085131 Oryza rufipogon 58.81 0.00e+00 687.00
IUUC-Osa-086189 Oryza sativa 64.81 0.00e+00 815.00
IUUC-Ola-086574 Oryzias latipes 46.57 2.00e-93 336.00
IUUC-Olu-087616 Ostreococcus lucimarinus 44.68 6.00e-93 334.00
IUUC-Oga-088827 Otolemur garnettii 46.21 6.00e-96 344.00
IUUC-Oar-089648 Ovis aries 46.21 4.00e-96 345.00
IUUC-Ptr-091195 Pan troglodytes 46.34 8.00e-96 344.00
IUUC-Pan-091978 Papio anubis 46.34 6.00e-96 344.00
IUUC-Psi-093598 Pelodiscus sinensis 37.52 3.00e-105 374.00
IUUC-Pma-094593 Petromyzon marinus 38.94 6.00e-58 218.00
IUUC-Pno-094823 Phaeosphaeria nodorum 34.56 3.00e-83 302.00
IUUC-Ppa-095455 Physcomitrella patens 55.33 0.00e+00 728.00
IUUC-Pfo-097120 Poecilia formosa 47.99 3.00e-95 342.00
IUUC-Pab-098771 Pongo abelii 46.34 5.00e-96 344.00
IUUC-Pop-099542 Populus trichocarpa 74.74 0.00e+00 1019.00
IUUC-Pca-100804 Procavia capensis 32.52 5.00e-75 274.00
IUUC-Ppe-101686 Prunus persica 74.96 0.00e+00 1003.00
IUUC-Pva-102414 Pteropus vampyrus 39.69 2.00e-72 266.00
IUUC-Pgr-103603 Puccinia graminis 33.61 6.00e-88 318.00
IUUC-Ptt-103995 Puccinia triticina 32.72 2.00e-70 260.00
IUUC-Pte-104359 Pyrenophora teres 32.31 3.00e-84 305.00
IUUC-Pyt-104523 Pyrenophora triticirepentis 31.98 3.00e-84 305.00
IUUC-Rno-105064 Rattus norvegicus 46.21 1.00e-95 343.00
IUUC-Sce-106186 Saccharomyces cerevisiae 34.60 2.00e-101 362.00
IUUC-Sha-106582 Sarcophilus harrisii 37.99 2.00e-120 425.00
IUUC-Sja-107683 Schizosaccharomyces japonicus 34.71 2.00e-109 389.00
IUUC-Spo-108142 Schizosaccharomyces pombe 35.47 3.00e-110 391.00
IUUC-Ssl-108456 Sclerotinia sclerotiorum 37.56 3.00e-69 256.00
IUUC-Smo-109097 Selaginella moellendorffii 57.70 0.00e+00 712.00
IUUC-Sit-109804 Setaria italica 66.52 0.00e+00 850.00
IUUC-Sly-111693 Solanum lycopersicum 71.39 0.00e+00 941.00
IUUC-Sar-113381 Sorex araneus 41.42 2.00e-74 273.00
IUUC-Sbi-114849 Sorghum bicolor 66.41 0.00e+00 842.00
IUUC-Sre-114945 Sporisorium reilianum 37.99 7.00e-74 271.00
IUUC-Ssc-115582 Sus scrofa 45.45 2.00e-94 338.00
IUUC-Tgu-116899 Taeniopygia guttata 45.03 2.00e-94 339.00
IUUC-Tru-118011 Takifugu rubripes 44.47 2.00e-92 332.00
IUUC-Tsy-119622 Tarsius syrichta 32.43 2.00e-47 183.00
IUUC-Tni-120598 Tetraodon nigroviridis 44.36 1.00e-92 333.00
IUUC-Tca-121247 Theobroma cacao 77.06 0.00e+00 1045.00
IUUC-Tre-121949 Trichoderma reesei 35.46 8.00e-61 227.00
IUUC-Tvi-122626 Trichoderma virens 32.82 1.00e-57 217.00
IUUC-Tae-123335 Triticum aestivum 64.33 0.00e+00 786.00
IUUC-Tur-126005 Triticum urartu 60.15 0.00e+00 716.00
IUUC-Tme-126904 Tuber melanosporum 33.43 4.00e-111 394.00
IUUC-Tbe-127254 Tupaia belangeri 39.69 7.00e-74 271.00
IUUC-Ttr-128544 Tursiops truncatus 46.34 4.00e-96 345.00
IUUC-Uma-129379 Ustilago maydis 43.67 7.00e-71 261.00
IUUC-Vda-129761 Verticillium dahliae 33.68 3.00e-55 209.00
IUUC-Vpa-130485 Vicugna pacos 46.34 7.00e-96 344.00
IUUC-Vvi-131171 Vitis vinifera 75.37 0.00e+00 999.00
IUUC-Xtr-132762 Xenopus tropicalis 39.33 6.00e-71 261.00
IUUC-Xma-133583 Xiphophorus maculatus 47.70 2.00e-94 339.00
IUUC-Yli-134446 Yarrowia lipolytica 40.28 3.00e-129 454.00
IUUC-Zma-135722 Zea mays 65.44 0.00e+00 837.00
Created Date 25-Jun-2017

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