iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000006303.2	ENSOCUT00000026567.1	ENSOCUP00000019965.1
ENSOCUG00000006303.2	ENSOCUT00000006303.2	ENSOCUP00000005450.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-44	147.0	624	662
UBD/Beta-Prp	5.00e-88	295.2	472	793

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v+c +f ++ +++++Gs D t+++WD+  g++++
   Q: 624  GHLADVNCTRFhPNsNYVATGSADRTVRLWDVLNGNCVR 662
           89**********777*****************9999986 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl...............................lrslsgheaevtavkfspdgkilvtg 70
           +t+v++++d+sl+a g++d+t++vw+vt++kl                               l+ l+gh+++v+  +fspd+++l+++
   Q: 472  LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLrsvkqasdlslidkesddvlerimdektaseLKILYGHSGPVYGASFSPDRNYLLSS 560
           799************************************************************************************** PP
   S: 71   seDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr 159
           seD+t+++w+l+t++c++ +kgh++ v++++fsp+g+++vsG+hdr++r+w ++++q l+ +++gh + vnc+++hp++n++++Gs+Dr
   Q: 561  SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADR 648
           ************************************************************.**************************** PP
   S: 160  tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           tvrlWd+ +g+++r +tg h+++++sl+f++ng++l++g++dg+v lwd+ +g +v +l+ghtd+v+s+rfs+++e+l+sgs+D+++r+
   Q: 649  TVRLWDVLNGNCVRIFTG-HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 736
           *****************9.********************************************************************** PP
   S: 249  W.......dlrsgdllktlqlhn..............ssvisvavlsfgdnvlvlgs 284
           W       dl+++d+++++ + n              +++++v +l+f++++lvl++
   Q: 737  WdaikafeDLETDDFTTATGHINlpensqelllgtymTKSTPVVHLHFTRRNLVLAA 793
           ****************************************************99986 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MAALAEEQTE VAVKLESEGP PTLLPPQAGD GTGEGTVGIT NNGPNGSGGN VAAASSAGGD 60
GGTPKPAVAV SAAAPAGAAP VPAAASEAGA PHDRQTLLAV LQFLRQSNLR EAEEALRREA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGC TGGCGGAGGA GCAGACGGAG GTGGCGGTCA AGCTAGAGTC TGAGGGACCA 60
CCGACGCTGC TACCTCCGCA GGCGGGTGAC GGCACAGGCG AGGGCACCGT CGGCATTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0000790--C:nuclear chromatin
GO:0005669--C:transcription factor TFIID complex
GO:0033276--C:transcription factor TFTC complex
GO:0004402--F:histone acetyltransferase activity
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0044212--F:transcription regulatory region DNA binding
GO:0006367--P:transcription initiation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000851	Aegilops tauschii	51.93	7.00e-69	254.00
IUUC-Aml-001607	Ailuropoda melanoleuca	96.64	0.00e+00	1272.00
IUUC-Atr-003136	Amborella trichopoda	46.22	7.00e-95	341.00
IUUC-Apl-004193	Anas platyrhynchos	92.02	0.00e+00	1121.00
IUUC-Aca-004522	Anolis carolinensis	83.73	0.00e+00	1179.00
IUUC-Aly-006476	Arabidopsis lyrata	38.65	3.00e-115	409.00
IUUC-Ath-006587	Arabidopsis thaliana	47.19	4.00e-88	318.00
IUUC-Ago-007736	Ashbya gossypii	42.82	2.00e-93	337.00
IUUC-Acl-008092	Aspergillus clavatus	36.34	3.00e-78	286.00
IUUC-Afl-008659	Aspergillus flavus	36.60	8.00e-80	291.00
IUUC-Afu-008902	Aspergillus fumigatus	37.96	5.00e-80	292.00
IUUC-Ani-009462	Aspergillus nidulans	38.39	3.00e-81	295.00
IUUC-Aor-010083	Aspergillus oryzae	36.60	9.00e-80	291.00
IUUC-Ate-010271	Aspergillus terreus	37.76	4.00e-80	292.00
IUUC-Ame-010721	Astyanax mexicanus	79.63	0.00e+00	1104.00
IUUC-Bgr-012257	Blumeria graminis	29.65	2.00e-74	273.00
IUUC-Bta-013539	Bos taurus	95.38	0.00e+00	1274.00
IUUC-Bci-013737	Botrytis cinerea	28.98	3.00e-79	289.00
IUUC-Bdi-015041	Brachypodium distachyon	48.94	1.00e-83	304.00
IUUC-Bol-015483	Brassica oleracea	37.65	5.00e-113	401.00
IUUC-Bra-017147	Brassica rapa	36.83	7.00e-113	401.00
IUUC-Cel-018451	Caenorhabditis elegans	33.78	1.00e-88	320.00
IUUC-Cja-018881	Callithrix jacchus	97.38	0.00e+00	1261.00
IUUC-Cfa-020056	Canis familiaris	97.46	0.00e+00	1285.00
IUUC-Cpo-021454	Cavia porcellus	87.52	0.00e+00	1241.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	40.07	5.00e-52	198.00
IUUC-Csa-023045	Chlorocebus sabaeus	98.98	0.00e+00	1156.00
IUUC-Cho-024284	Choloepus hoffmanni	85.83	0.00e+00	937.00
IUUC-Cin-025457	Ciona intestinalis	60.29	3.00e-100	357.00
IUUC-Csv-025882	Ciona savignyi	51.72	2.00e-179	622.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.59	2.00e-77	283.00
IUUC-Cne-026876	Cryptococcus neoformans	39.39	3.00e-73	270.00
IUUC-Cme-027302	Cyanidioschyzon merolae	34.41	2.00e-100	360.00
IUUC-Dre-027980	Danio rerio	77.78	0.00e+00	1068.00
IUUC-Dno-028863	Dasypus novemcinctus	97.00	0.00e+00	1244.00
IUUC-Dor-030561	Dipodomys ordii	96.00	0.00e+00	1232.00
IUUC-Dse-031547	Dothistroma septosporum	30.56	4.00e-78	285.00
IUUC-Dme-031917	Drosophila melanogaster	40.34	2.00e-144	506.00
IUUC-Ete-032319	Echinops telfairi	78.96	0.00e+00	907.00
IUUC-Eca-033927	Equus caballus	91.16	0.00e+00	1244.00
IUUC-Eeu-034449	Erinaceus europaeus	97.98	0.00e+00	951.00
IUUC-Fca-036325	Felis catus	97.46	0.00e+00	1251.00
IUUC-Fal-036604	Ficedula albicollis	94.10	0.00e+00	1150.00
IUUC-Fox-038049	Fusarium oxysporum	33.05	2.00e-49	190.00
IUUC-Fso-038302	Fusarium solani	29.45	1.00e-66	247.00
IUUC-Gmo-038832	Gadus morhua	74.65	0.00e+00	1008.00
IUUC-Ggr-039878	Gaeumannomyces graminis	29.08	4.00e-72	266.00
IUUC-Gga-041147	Gallus gallus	94.08	0.00e+00	1172.00
IUUC-Gac-041373	Gasterosteus aculeatus	78.36	0.00e+00	1056.00
IUUC-Gma-043230	Glycine max	37.68	4.00e-119	422.00
IUUC-Ggo-045526	Gorilla gorilla	96.06	0.00e+00	845.00
IUUC-Hsa-045971	Homo sapiens	97.00	0.00e+00	1250.00
IUUC-Hvu-047695	Hordeum vulgare	49.71	3.00e-87	315.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	97.74	0.00e+00	1268.00
IUUC-Kpa-049402	Komagataella pastoris	43.50	5.00e-95	342.00
IUUC-Lch-049526	Latimeria chalumnae	87.83	0.00e+00	1050.00
IUUC-Lpe-051560	Leersia perrieri	45.31	5.00e-90	325.00
IUUC-Loc-052882	Lepisosteus oculatus	81.68	0.00e+00	1130.00
IUUC-Lma-053212	Leptosphaeria maculans	30.71	2.00e-81	296.00
IUUC-Laf-053859	Loxodonta africana	95.85	0.00e+00	1274.00
IUUC-Mcc-054957	Macaca mulatta	98.82	0.00e+00	985.00
IUUC-Meu-056766	Macropus eugenii	96.96	0.00e+00	664.00
IUUC-Mor-057024	Magnaporthe oryzae	28.89	1.00e-67	251.00
IUUC-Mpo-057520	Magnaporthe poae	29.45	8.00e-73	268.00
IUUC-Mtr-058754	Medicago truncatula	38.77	4.00e-122	432.00
IUUC-Mla-058881	Melampsora laricipopulina	38.21	5.00e-80	292.00
IUUC-Mga-059776	Meleagris gallopavo	93.96	0.00e+00	1177.00
IUUC-Mvi-060208	Microbotryum violaceum	41.75	8.00e-84	305.00
IUUC-Mmr-061783	Microcebus murinus	98.82	0.00e+00	985.00
IUUC-Mdo-062856	Monodelphis domestica	89.96	0.00e+00	1201.00
IUUC-Mmu-064218	Mus musculus	97.46	0.00e+00	1269.00
IUUC-Mac-064886	Musa acuminata	53.05	2.00e-72	266.00
IUUC-Mpu-065735	Mustela putorius furo	97.32	0.00e+00	1266.00
IUUC-Mlu-067544	Myotis lucifugus	98.37	0.00e+00	1201.00
IUUC-Nfi-068502	Neosartorya fischeri	37.96	2.00e-80	293.00
IUUC-Ncr-068891	Neurospora crassa	30.05	1.00e-76	281.00
IUUC-Nle-069389	Nomascus leucogenys	97.12	0.00e+00	1265.00
IUUC-Opr-071042	Ochotona princeps	87.94	0.00e+00	677.00
IUUC-Ont-071455	Oreochromis niloticus	79.27	0.00e+00	1080.00
IUUC-Oan-073181	Ornithorhynchus anatinus	94.63	0.00e+00	1165.00
IUUC-Oba-075739	Oryza barthii	44.89	1.00e-81	297.00
IUUC-Obr-076111	Oryza brachyantha	38.40	7.00e-113	401.00
IUUC-Ogl-077914	Oryza glaberrima	36.71	2.00e-99	356.00
IUUC-Ogu-078057	Oryza glumaepatula	42.47	9.00e-73	267.00
IUUC-Oin-079473	Oryza indica	37.42	2.00e-102	366.00
IUUC-Olo-080645	Oryza longistaminata	52.47	2.00e-69	256.00
IUUC-Ome-081831	Oryza meridionalis	42.20	9.00e-72	264.00
IUUC-Oni-082431	Oryza nivara	36.21	2.00e-98	352.00
IUUC-Opu-083325	Oryza punctata	35.44	3.00e-91	329.00
IUUC-Oru-085131	Oryza rufipogon	43.20	4.00e-73	269.00
IUUC-Osa-086189	Oryza sativa	37.58	2.00e-103	369.00
IUUC-Ola-086574	Oryzias latipes	80.88	0.00e+00	1105.00
IUUC-Olu-087616	Ostreococcus lucimarinus	33.39	2.00e-100	359.00
IUUC-Oga-088827	Otolemur garnettii	96.25	0.00e+00	1299.00
IUUC-Oar-089648	Ovis aries	95.38	0.00e+00	1274.00
IUUC-Ptr-091195	Pan troglodytes	96.88	0.00e+00	1286.00
IUUC-Pan-091978	Papio anubis	96.75	0.00e+00	1266.00
IUUC-Psi-093598	Pelodiscus sinensis	94.04	0.00e+00	1060.00
IUUC-Pno-094823	Phaeosphaeria nodorum	31.00	5.00e-86	311.00
IUUC-Ppa-095455	Physcomitrella patens	45.92	2.00e-95	343.00
IUUC-Pfo-097120	Poecilia formosa	79.63	0.00e+00	1064.00
IUUC-Pab-098771	Pongo abelii	97.25	0.00e+00	1263.00
IUUC-Pop-099542	Populus trichocarpa	45.03	2.00e-95	343.00
IUUC-Pca-100804	Procavia capensis	87.78	0.00e+00	920.00
IUUC-Ppe-101686	Prunus persica	37.85	5.00e-111	395.00
IUUC-Pva-102414	Pteropus vampyrus	93.09	0.00e+00	1189.00
IUUC-Pgr-103603	Puccinia graminis	37.00	1.00e-73	271.00
IUUC-Pte-104359	Pyrenophora teres	30.26	3.00e-83	302.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	29.71	7.00e-84	305.00
IUUC-Rno-105064	Rattus norvegicus	95.75	0.00e+00	1298.00
IUUC-Sce-106186	Saccharomyces cerevisiae	42.75	4.00e-91	329.00
IUUC-Sha-106582	Sarcophilus harrisii	97.56	0.00e+00	1190.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	38.26	1.00e-110	393.00
IUUC-Spo-108142	Schizosaccharomyces pombe	36.35	7.00e-108	384.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	28.14	4.00e-78	286.00
IUUC-Smo-109111	Selaginella moellendorffii	37.46	7.00e-107	380.00
IUUC-Sit-109804	Setaria italica	38.16	1.00e-106	380.00
IUUC-Sly-111693	Solanum lycopersicum	37.69	5.00e-110	391.00
IUUC-Sar-113412	Sorex araneus	96.93	0.00e+00	793.00
IUUC-Sbi-114849	Sorghum bicolor	37.28	1.00e-104	374.00
IUUC-Sre-114945	Sporisorium reilianum	35.37	9.00e-78	285.00
IUUC-Ssc-115582	Sus scrofa	78.56	0.00e+00	926.00
IUUC-Tgu-116899	Taeniopygia guttata	94.16	0.00e+00	1137.00
IUUC-Tru-118011	Takifugu rubripes	78.80	0.00e+00	1085.00
IUUC-Tni-120598	Tetraodon nigroviridis	79.61	0.00e+00	1073.00
IUUC-Tca-121247	Theobroma cacao	44.73	9.00e-95	341.00
IUUC-Tre-121949	Trichoderma reesei	36.41	8.00e-63	234.00
IUUC-Tvi-122626	Trichoderma virens	33.11	4.00e-64	239.00
IUUC-Tae-123335	Triticum aestivum	50.29	8.00e-89	321.00
IUUC-Tur-126005	Triticum urartu	45.17	1.00e-82	300.00
IUUC-Tme-126904	Tuber melanosporum	42.38	2.00e-91	330.00
IUUC-Tbe-127254	Tupaia belangeri	92.42	0.00e+00	1209.00
IUUC-Ttr-128544	Tursiops truncatus	97.32	0.00e+00	1246.00
IUUC-Uma-129379	Ustilago maydis	34.31	8.00e-78	285.00
IUUC-Vda-129761	Verticillium dahliae	33.67	2.00e-58	220.00
IUUC-Vpa-130485	Vicugna pacos	96.00	0.00e+00	1253.00
IUUC-Vvi-131171	Vitis vinifera	37.79	2.00e-116	412.00
IUUC-Xtr-132762	Xenopus tropicalis	73.07	0.00e+00	967.00
IUUC-Xma-133583	Xiphophorus maculatus	79.92	0.00e+00	1070.00
IUUC-Yli-134446	Yarrowia lipolytica	37.42	6.00e-117	414.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence