iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003545

Ensembl Protein ID

ENSAPLP00000007978.1

UniProt Accession

U3IL56; U3IL56_ANAPL

Genbank Protein ID

ENSAPLP00000007978

Protein Name

Ribosome biogenesis protein BOP1; Block of proliferation 1 protein

Genbank Nucleotide ID

ADON01091368

Gene Name

BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000008324.1	ENSAPLT00000008647.1	ENSAPLP00000007978.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-07	30.2	519	547

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvW 28
           H+   +++af    +l++sGsdDgt+ v+
   Q: 519  HKKALRSVAFhKHyPLFASGSDDGTVIVC 547
           777899****95559**********9875 PP

Organism

Anas platyrhynchos

Functional Description
(View)

Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

QDIRNTVGNI PMEWYEDFPH IGYDLEGRKI YKPIRNKDEL DKFLEKMENP DYWRTVQDKM 60
TGADIKLTDE QVELVQRLQK GQFGDVHFHF DPYEPAVDFF SHEVMIHPVT NRPADKRSFI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGACATCC GCAACACGGT GGGCAACATC CCCATGGAGT GGTACGAGGA CTTCCCGCAC 60
ATCGGCTACG ACCTGGAGGG CAGGAAGATC TATAAACCCA TCCGCAACAA GGACGAGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0003723--F:RNA binding
GO:0008283--P:cell proliferation
GO:0000448--P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0051726--P:regulation of cell cycle

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	41.81	4.00e-109	388.00
IUUC-Aml-001507	Ailuropoda melanoleuca	63.29	0.00e+00	689.00
IUUC-Atr-003141	Amborella trichopoda	39.12	2.00e-73	269.00
IUUC-Aly-005649	Arabidopsis lyrata	42.08	6.00e-124	437.00
IUUC-Ath-007625	Arabidopsis thaliana	42.88	1.00e-123	436.00
IUUC-Ago-007958	Ashbya gossypii	45.31	2.00e-74	273.00
IUUC-Acl-008344	Aspergillus clavatus	39.60	3.00e-107	382.00
IUUC-Afl-008616	Aspergillus flavus	40.23	3.00e-108	385.00
IUUC-Afu-009083	Aspergillus fumigatus	40.26	1.00e-102	367.00
IUUC-Ani-009365	Aspergillus nidulans	40.60	3.00e-108	385.00
IUUC-Ang-009796	Aspergillus niger	39.93	3.00e-103	369.00
IUUC-Aor-010015	Aspergillus oryzae	40.23	3.00e-108	385.00
IUUC-Ate-010537	Aspergillus terreus	40.83	2.00e-109	390.00
IUUC-Ame-011767	Astyanax mexicanus	68.06	9.00e-83	299.00
IUUC-Bgr-012286	Blumeria graminis	40.96	1.00e-114	407.00
IUUC-Bta-013569	Bos taurus	67.01	0.00e+00	747.00
IUUC-Bci-013820	Botrytis cinerea	39.07	7.00e-104	371.00
IUUC-Bdi-014895	Brachypodium distachyon	42.86	1.00e-123	436.00
IUUC-Bol-016099	Brassica oleracea	42.18	3.00e-122	432.00
IUUC-Bra-017174	Brassica rapa	42.81	9.00e-122	431.00
IUUC-Cel-018201	Caenorhabditis elegans	45.47	4.00e-129	454.00
IUUC-Cja-019009	Callithrix jacchus	60.52	0.00e+00	683.00
IUUC-Cfa-020173	Canis familiaris	61.81	0.00e+00	701.00
IUUC-Cpo-021796	Cavia porcellus	67.60	0.00e+00	768.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	42.59	9.00e-119	420.00
IUUC-Csa-023440	Chlorocebus sabaeus	68.12	0.00e+00	782.00
IUUC-Cin-025782	Ciona intestinalis	52.23	2.00e-178	619.00
IUUC-Csv-026352	Ciona savignyi	54.77	0.00e+00	629.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	37.05	2.00e-81	296.00
IUUC-Cne-027004	Cryptococcus neoformans	46.20	1.00e-80	294.00
IUUC-Cme-027242	Cyanidioschyzon merolae	34.44	3.00e-86	312.00
IUUC-Dre-028658	Danio rerio	72.52	0.00e+00	832.00
IUUC-Dno-028883	Dasypus novemcinctus	67.88	0.00e+00	765.00
IUUC-Dor-031031	Dipodomys ordii	66.32	0.00e+00	765.00
IUUC-Dse-031443	Dothistroma septosporum	39.02	4.00e-110	391.00
IUUC-Dme-031786	Drosophila melanogaster	47.86	5.00e-162	564.00
IUUC-Eca-033677	Equus caballus	68.29	0.00e+00	768.00
IUUC-Eeu-035310	Erinaceus europaeus	63.19	0.00e+00	654.00
IUUC-Fca-035888	Felis catus	66.90	0.00e+00	771.00
IUUC-Fal-037438	Ficedula albicollis	65.32	7.00e-173	600.00
IUUC-Fox-037973	Fusarium oxysporum	40.55	8.00e-122	431.00
IUUC-Fso-038187	Fusarium solani	39.86	4.00e-119	422.00
IUUC-Gmo-039114	Gadus morhua	59.58	0.00e+00	670.00
IUUC-Ggr-039746	Gaeumannomyces graminis	38.95	1.00e-115	410.00
IUUC-Gga-040631	Gallus gallus	72.45	4.00e-117	414.00
IUUC-Gac-042582	Gasterosteus aculeatus	63.67	0.00e+00	698.00
IUUC-Gma-044215	Glycine max	42.41	2.00e-114	405.00
IUUC-Ggo-045587	Gorilla gorilla	68.06	0.00e+00	786.00
IUUC-Hsa-046319	Homo sapiens	67.94	0.00e+00	785.00
IUUC-Hvu-047526	Hordeum vulgare	43.83	2.00e-117	416.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	67.07	0.00e+00	764.00
IUUC-Kpa-049221	Komagataella pastoris	39.31	1.00e-120	427.00
IUUC-Lch-049640	Latimeria chalumnae	72.52	0.00e+00	867.00
IUUC-Lpe-051135	Leersia perrieri	41.37	2.00e-109	389.00
IUUC-Loc-051930	Lepisosteus oculatus	72.08	0.00e+00	850.00
IUUC-Lma-053290	Leptosphaeria maculans	39.80	7.00e-107	381.00
IUUC-Laf-053903	Loxodonta africana	60.88	0.00e+00	664.00
IUUC-Mcc-055471	Macaca mulatta	67.77	0.00e+00	780.00
IUUC-Meu-056190	Macropus eugenii	68.35	0.00e+00	776.00
IUUC-Mor-057135	Magnaporthe oryzae	41.29	1.00e-62	234.00
IUUC-Mpo-057475	Magnaporthe poae	38.26	3.00e-107	382.00
IUUC-Mtr-058689	Medicago truncatula	38.57	3.00e-96	345.00
IUUC-Mla-059149	Melampsora laricipopulina	43.46	3.00e-136	478.00
IUUC-Mga-059645	Meleagris gallopavo	73.11	2.00e-85	308.00
IUUC-Mvi-060485	Microbotryum violaceum	43.78	2.00e-116	413.00
IUUC-Mmr-061674	Microcebus murinus	66.84	0.00e+00	753.00
IUUC-Mdo-062973	Monodelphis domestica	68.53	0.00e+00	788.00
IUUC-Mmu-064180	Mus musculus	66.26	0.00e+00	764.00
IUUC-Mac-064535	Musa acuminata	38.10	1.00e-79	290.00
IUUC-Mpu-066406	Mustela putorius furo	66.38	0.00e+00	768.00
IUUC-Mlu-067795	Myotis lucifugus	67.42	0.00e+00	736.00
IUUC-Nfi-068516	Neosartorya fischeri	44.85	2.00e-59	223.00
IUUC-Ncr-068767	Neurospora crassa	40.91	1.00e-102	367.00
IUUC-Opr-071084	Ochotona princeps	64.57	6.00e-91	327.00
IUUC-Ont-071614	Oreochromis niloticus	64.24	0.00e+00	746.00
IUUC-Oba-075980	Oryza barthii	40.36	5.00e-107	381.00
IUUC-Obr-076799	Oryza brachyantha	42.43	1.00e-120	426.00
IUUC-Ogl-077134	Oryza glaberrima	41.57	6.00e-115	407.00
IUUC-Ogu-078655	Oryza glumaepatula	39.13	6.00e-108	384.00
IUUC-Oin-079654	Oryza indica	41.57	8.00e-115	407.00
IUUC-Olo-080706	Oryza longistaminata	41.29	4.00e-108	384.00
IUUC-Ome-081716	Oryza meridionalis	39.73	9.00e-69	254.00
IUUC-Oni-082508	Oryza nivara	38.72	2.00e-103	369.00
IUUC-Opu-083707	Oryza punctata	41.29	3.00e-108	385.00
IUUC-Oru-084453	Oryza rufipogon	41.29	4.00e-108	384.00
IUUC-Osa-085811	Oryza sativa	41.57	6.00e-115	407.00
IUUC-Ola-087361	Oryzias latipes	66.15	0.00e+00	758.00
IUUC-Oga-088015	Otolemur garnettii	66.20	0.00e+00	781.00
IUUC-Oar-090058	Ovis aries	54.49	3.00e-79	288.00
IUUC-Ptr-090631	Pan troglodytes	78.24	1.00e-124	438.00
IUUC-Pan-092306	Papio anubis	68.17	0.00e+00	780.00
IUUC-Pma-094622	Petromyzon marinus	66.90	0.00e+00	800.00
IUUC-Pno-094794	Phaeosphaeria nodorum	43.20	5.00e-55	209.00
IUUC-Ppa-095528	Physcomitrella patens	39.72	4.00e-82	298.00
IUUC-Pfo-096682	Poecilia formosa	64.47	0.00e+00	754.00
IUUC-Pab-097939	Pongo abelii	66.54	0.00e+00	677.00
IUUC-Pop-099043	Populus trichocarpa	42.58	2.00e-105	376.00
IUUC-Pca-100333	Procavia capensis	65.38	0.00e+00	746.00
IUUC-Ppe-102078	Prunus persica	38.99	2.00e-107	382.00
IUUC-Pgr-103525	Puccinia graminis	42.66	5.00e-123	435.00
IUUC-Ptt-103929	Puccinia triticina	41.88	3.00e-122	432.00
IUUC-Pte-104029	Pyrenophora teres	40.31	1.00e-120	426.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	40.48	1.00e-120	426.00
IUUC-Rno-105248	Rattus norvegicus	67.13	0.00e+00	773.00
IUUC-Sce-106381	Saccharomyces cerevisiae	44.87	2.00e-73	270.00
IUUC-Sha-106519	Sarcophilus harrisii	69.79	0.00e+00	798.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	38.53	1.00e-106	380.00
IUUC-Spo-108071	Schizosaccharomyces pombe	37.06	5.00e-106	378.00
IUUC-Smo-109604	Selaginella moellendorffii	43.68	1.00e-119	423.00
IUUC-Sit-110551	Setaria italica	42.61	9.00e-118	417.00
IUUC-Sly-110970	Solanum lycopersicum	43.55	8.00e-68	250.00
IUUC-Stu-112593	Solanum tuberosum	43.03	4.00e-117	415.00
IUUC-Sar-113123	Sorex araneus	61.03	3.00e-67	248.00
IUUC-Sbi-113945	Sorghum bicolor	42.26	1.00e-120	426.00
IUUC-Sre-115188	Sporisorium reilianum	40.38	4.00e-123	435.00
IUUC-Ssc-115352	Sus scrofa	66.67	0.00e+00	775.00
IUUC-Tru-117685	Takifugu rubripes	64.82	0.00e+00	756.00
IUUC-Tni-119982	Tetraodon nigroviridis	63.44	0.00e+00	734.00
IUUC-Tca-121664	Theobroma cacao	42.06	4.00e-117	414.00
IUUC-Tre-122229	Trichoderma reesei	41.39	1.00e-111	397.00
IUUC-Tvi-122576	Trichoderma virens	40.78	2.00e-109	390.00
IUUC-Tae-124110	Triticum aestivum	43.38	1.00e-108	387.00
IUUC-Tur-126781	Triticum urartu	42.17	1.00e-105	377.00
IUUC-Tme-127080	Tuber melanosporum	44.73	2.00e-138	486.00
IUUC-Ttr-128514	Tursiops truncatus	63.51	5.00e-162	564.00
IUUC-Uma-129556	Ustilago maydis	40.71	4.00e-119	422.00
IUUC-Vda-129715	Verticillium dahliae	40.20	3.00e-112	399.00
IUUC-Vvi-131211	Vitis vinifera	41.35	4.00e-121	428.00
IUUC-Xma-133883	Xiphophorus maculatus	64.59	0.00e+00	744.00
IUUC-Yli-134438	Yarrowia lipolytica	45.13	3.00e-61	229.00
IUUC-Zma-135341	Zea mays	38.34	6.00e-75	275.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence