iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014477

UUCD1 version

UUC-BrD-01342

Ensembl Protein ID

BRADI3G60762.2

UniProt Accession

I1IFT2; I1IFT2_BRADI

Protein Name

Ribosome biogenesis protein BOP1 homolog

Gene Name

LOC100822652

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G60762	BRADI3G60762.1	BRADI3G60762.1
BRADI3G60762	BRADI3G60762.2	BRADI3G60762.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-14	52.3	337	375

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+++v +l+   ++  ++sGs Dgti+vW++ tg++lk
   Q: 337  GHNGPVKSLSVeaTGQWIASGSSDGTIRVWEVETGRCLK 375
           8*********9976699********************97 PP

Organism

Brachypodium distachyon

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MGHADQDRQP VNNDGLSSDD EPWSDSDEGS LSFDDSGSDD PDEDEAAAGE SDSSEDEVGP 60
RNTVGQVPLE WYKDEEHIGY DIDGRKIKKR DREGRIEQYL RNADDAKNWR KIYDVYNDEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCACG CCGACCAGGA CCGCCAACCA GTCAACAACG ACGGCCTCTC TTCCGACGAC 60
GAGCCCTGGA GCGACAGCGA CGAGGTCCGC CACTCTCTGC TTCCTCCTCC AACGATTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

bdi:100822652

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001507	Ailuropoda melanoleuca	43.41	2.00e-136	479.00
IUUC-Ath-007625	Arabidopsis thaliana	63.51	0.00e+00	820.00
IUUC-Ago-007958	Ashbya gossypii	40.00	1.00e-138	486.00
IUUC-Acl-008344	Aspergillus clavatus	40.74	2.00e-122	432.00
IUUC-Afl-008616	Aspergillus flavus	39.39	1.00e-124	440.00
IUUC-Afu-009083	Aspergillus fumigatus	39.26	7.00e-119	421.00
IUUC-Ani-009365	Aspergillus nidulans	39.76	2.00e-125	442.00
IUUC-Ang-009796	Aspergillus niger	39.40	7.00e-124	437.00
IUUC-Aor-010015	Aspergillus oryzae	39.39	1.00e-124	440.00
IUUC-Ate-010537	Aspergillus terreus	39.71	8.00e-129	453.00
IUUC-Bgr-012286	Blumeria graminis	41.72	1.00e-139	489.00
IUUC-Bci-013820	Botrytis cinerea	41.77	1.00e-128	452.00
IUUC-Bra-017174	Brassica rapa	65.26	0.00e+00	864.00
IUUC-Cel-018201	Caenorhabditis elegans	40.71	5.00e-126	444.00
IUUC-Cfa-020173	Canis familiaris	41.79	1.00e-137	483.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	50.24	1.00e-170	592.00
IUUC-Cin-025782	Ciona intestinalis	45.40	6.00e-154	537.00
IUUC-Csv-026352	Ciona savignyi	42.28	6.00e-146	510.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	35.85	7.00e-104	370.00
IUUC-Cne-027004	Cryptococcus neoformans	43.16	9.00e-151	526.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.04	1.00e-107	383.00
IUUC-Dse-031443	Dothistroma septosporum	39.08	5.00e-122	431.00
IUUC-Dme-031786	Drosophila melanogaster	42.38	4.00e-158	550.00
IUUC-Eeu-035310	Erinaceus europaeus	42.06	2.00e-113	402.00
IUUC-Fal-037438	Ficedula albicollis	46.83	7.00e-135	473.00
IUUC-Fox-037973	Fusarium oxysporum	41.71	2.00e-144	505.00
IUUC-Fso-038187	Fusarium solani	41.49	1.00e-141	496.00
IUUC-Gmo-039114	Gadus morhua	44.59	5.00e-142	497.00
IUUC-Ggr-039746	Gaeumannomyces graminis	42.46	3.00e-147	514.00
IUUC-Gga-040631	Gallus gallus	49.56	5.00e-95	340.00
IUUC-Gma-044215	Glycine max	64.04	0.00e+00	856.00
IUUC-Kpa-049221	Komagataella pastoris	39.43	4.00e-132	464.00
IUUC-Lpe-051135	Leersia perrieri	83.82	0.00e+00	994.00
IUUC-Lma-053290	Leptosphaeria maculans	41.47	1.00e-128	453.00
IUUC-Mor-057135	Magnaporthe oryzae	40.87	3.00e-137	481.00
IUUC-Mpo-057475	Magnaporthe poae	41.37	2.00e-138	485.00
IUUC-Mla-059149	Melampsora laricipopulina	42.41	2.00e-142	499.00
IUUC-Mga-059645	Meleagris gallopavo	45.56	4.00e-58	217.00
IUUC-Mac-064535	Musa acuminata	53.60	0.00e+00	757.00
IUUC-Nfi-068516	Neosartorya fischeri	39.62	4.00e-112	398.00
IUUC-Ncr-068767	Neurospora crassa	40.56	3.00e-129	455.00
IUUC-Obr-076799	Oryza brachyantha	82.84	0.00e+00	1099.00
IUUC-Oar-090058	Ovis aries	50.93	4.00e-46	178.00
IUUC-Pno-094794	Phaeosphaeria nodorum	38.41	6.00e-119	420.00
IUUC-Ppe-102078	Prunus persica	62.56	0.00e+00	813.00
IUUC-Pgr-103525	Puccinia graminis	41.85	9.00e-132	463.00
IUUC-Ptt-103929	Puccinia triticina	41.60	6.00e-126	444.00
IUUC-Pte-104029	Pyrenophora teres	40.47	5.00e-137	481.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	40.62	9.00e-138	483.00
IUUC-Sce-106381	Saccharomyces cerevisiae	39.94	5.00e-138	484.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	40.69	5.00e-130	457.00
IUUC-Spo-108071	Schizosaccharomyces pombe	40.52	2.00e-131	462.00
IUUC-Sar-113123	Sorex araneus	43.71	2.00e-64	238.00
IUUC-Tca-121664	Theobroma cacao	66.52	0.00e+00	900.00
IUUC-Tre-122229	Trichoderma reesei	40.87	6.00e-124	437.00
IUUC-Tvi-122576	Trichoderma virens	41.49	2.00e-129	455.00
IUUC-Tme-127080	Tuber melanosporum	44.30	7.00e-155	540.00
IUUC-Uma-129556	Ustilago maydis	39.50	1.00e-125	443.00
IUUC-Vda-129715	Verticillium dahliae	40.80	3.00e-138	484.00
IUUC-Yli-134438	Yarrowia lipolytica	40.21	2.00e-125	442.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence