iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Opu-083707

Ensembl Protein ID

OPUNC07G10960.1

UniProt Accession

A0A0E0LJV9; A0A0E0LJV9_ORYPU

Protein Name

Ribosome biogenesis protein BOP1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OPUNC07G10960	OPUNC07G10960.1	OPUNC07G10960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-12	46.3	343	381

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+++v +l+   ++  ++sGs Dgti+vW++ tg+++k
   Q: 343  GHNGPVKSLSVeaTGQWIASGSSDGTIRVWEVETGRCIK 381
           8*********9976699********************87 PP

Organism

Oryza punctata

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MGHSDGDHGS DLSADDSPWS EGSWSDDDDE GSLSFEDSGE GSDPESDEPD AAAAEESDSS 60
EDEVAPRNTI GDVPLEWYKN EEHIGYDITG SKIKKRDREG RIEAYLRNAD DAKNWRKIYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCACGCCAA GGCCTTTGCC AGAATATGGG GCATAGCGAC GGCGACCACG GCAGCGACCT 60
CTCCGCCGAC GATTCCCCGT GGAGTGAGGG GAGCTGGTCC GACGACGATG ACGAGGTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	84.28	0.00e+00	957.00
IUUC-Aml-001507	Ailuropoda melanoleuca	39.68	8.00e-123	433.00
IUUC-Atr-003141	Amborella trichopoda	64.59	2.00e-151	528.00
IUUC-Apl-003545	Anas platyrhynchos	41.29	3.00e-118	417.00
IUUC-Aly-005649	Arabidopsis lyrata	62.19	0.00e+00	796.00
IUUC-Ath-007625	Arabidopsis thaliana	60.24	0.00e+00	774.00
IUUC-Ago-007958	Ashbya gossypii	37.54	5.00e-126	444.00
IUUC-Acl-008344	Aspergillus clavatus	39.52	5.00e-113	401.00
IUUC-Afl-008616	Aspergillus flavus	38.37	3.00e-113	402.00
IUUC-Afu-009083	Aspergillus fumigatus	43.87	2.00e-62	233.00
IUUC-Ani-009365	Aspergillus nidulans	40.69	1.00e-69	257.00
IUUC-Ang-009796	Aspergillus niger	38.54	1.00e-110	393.00
IUUC-Aor-010015	Aspergillus oryzae	38.37	3.00e-113	402.00
IUUC-Ate-010537	Aspergillus terreus	37.54	2.00e-116	412.00
IUUC-Ame-011767	Astyanax mexicanus	52.94	2.00e-58	218.00
IUUC-Bgr-012286	Blumeria graminis	39.09	1.00e-124	439.00
IUUC-Bta-013569	Bos taurus	42.67	2.00e-137	482.00
IUUC-Bci-013820	Botrytis cinerea	40.40	1.00e-115	410.00
IUUC-Bdi-014895	Brachypodium distachyon	80.06	0.00e+00	1049.00
IUUC-Bol-016099	Brassica oleracea	63.90	0.00e+00	825.00
IUUC-Bra-017174	Brassica rapa	63.80	0.00e+00	833.00
IUUC-Cel-018201	Caenorhabditis elegans	38.74	1.00e-115	410.00
IUUC-Cja-019009	Callithrix jacchus	40.85	5.00e-128	451.00
IUUC-Cfa-020173	Canis familiaris	39.97	1.00e-129	456.00
IUUC-Cpo-021796	Cavia porcellus	43.00	7.00e-137	480.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	47.32	7.00e-158	550.00
IUUC-Csa-023440	Chlorocebus sabaeus	42.49	9.00e-141	493.00
IUUC-Cin-025782	Ciona intestinalis	42.09	2.00e-139	489.00
IUUC-Csv-026352	Ciona savignyi	42.63	2.00e-144	505.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	37.58	3.00e-101	362.00
IUUC-Cne-027004	Cryptococcus neoformans	41.50	1.00e-140	493.00
IUUC-Cme-027242	Cyanidioschyzon merolae	33.28	2.00e-98	352.00
IUUC-Dre-028658	Danio rerio	43.65	1.00e-149	523.00
IUUC-Dno-028883	Dasypus novemcinctus	43.53	2.00e-140	492.00
IUUC-Dor-031031	Dipodomys ordii	41.69	5.00e-139	487.00
IUUC-Dse-031443	Dothistroma septosporum	40.22	8.00e-65	241.00
IUUC-Dme-031786	Drosophila melanogaster	40.80	2.00e-139	489.00
IUUC-Eca-033677	Equus caballus	43.20	3.00e-137	481.00
IUUC-Eeu-035310	Erinaceus europaeus	38.40	1.00e-100	359.00
IUUC-Fca-035888	Felis catus	40.87	4.00e-131	461.00
IUUC-Fal-037438	Ficedula albicollis	44.80	1.00e-122	432.00
IUUC-Fox-037973	Fusarium oxysporum	39.84	2.00e-129	456.00
IUUC-Fso-038187	Fusarium solani	38.52	1.00e-126	446.00
IUUC-Gmo-039114	Gadus morhua	40.33	2.00e-128	452.00
IUUC-Ggr-039746	Gaeumannomyces graminis	38.43	2.00e-131	462.00
IUUC-Gga-040631	Gallus gallus	45.45	3.00e-82	297.00
IUUC-Gac-042582	Gasterosteus aculeatus	41.55	4.00e-133	468.00
IUUC-Gma-044215	Glycine max	60.90	0.00e+00	797.00
IUUC-Ggo-045587	Gorilla gorilla	42.56	2.00e-140	492.00
IUUC-Hsa-046319	Homo sapiens	42.56	8.00e-141	493.00
IUUC-Hvu-047526	Hordeum vulgare	78.09	0.00e+00	1013.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	43.32	2.00e-138	485.00
IUUC-Kpa-049221	Komagataella pastoris	40.16	5.00e-72	265.00
IUUC-Lch-049640	Latimeria chalumnae	43.45	4.00e-153	534.00
IUUC-Lpe-051135	Leersia perrieri	95.36	0.00e+00	1082.00
IUUC-Loc-051930	Lepisosteus oculatus	44.16	2.00e-150	525.00
IUUC-Lma-053290	Leptosphaeria maculans	39.60	4.00e-116	411.00
IUUC-Laf-053903	Loxodonta africana	43.42	5.00e-82	298.00
IUUC-Mcc-055471	Macaca mulatta	42.56	1.00e-141	496.00
IUUC-Meu-056190	Macropus eugenii	42.97	2.00e-137	482.00
IUUC-Mor-057135	Magnaporthe oryzae	38.31	4.00e-124	438.00
IUUC-Mpo-057475	Magnaporthe poae	37.25	7.00e-122	430.00
IUUC-Mtr-058689	Medicago truncatula	50.00	3.00e-170	591.00
IUUC-Mla-059149	Melampsora laricipopulina	41.51	1.00e-132	466.00
IUUC-Mga-059645	Meleagris gallopavo	39.52	9.00e-45	172.00
IUUC-Mvi-060485	Microbotryum violaceum	39.48	1.00e-121	431.00
IUUC-Mmr-061674	Microcebus murinus	42.83	4.00e-137	481.00
IUUC-Mdo-062973	Monodelphis domestica	41.35	6.00e-143	501.00
IUUC-Mmu-064180	Mus musculus	40.70	1.00e-139	489.00
IUUC-Mac-064535	Musa acuminata	68.22	2.00e-179	622.00
IUUC-Mpu-066406	Mustela putorius furo	42.12	9.00e-142	496.00
IUUC-Mlu-067795	Myotis lucifugus	41.99	2.00e-129	456.00
IUUC-Nfi-068516	Neosartorya fischeri	40.10	1.00e-56	214.00
IUUC-Ncr-068767	Neurospora crassa	39.20	4.00e-117	415.00
IUUC-Opr-071084	Ochotona princeps	46.29	2.00e-63	236.00
IUUC-Ont-071614	Oreochromis niloticus	41.32	1.00e-142	499.00
IUUC-Oba-075980	Oryza barthii	98.15	0.00e+00	1152.00
IUUC-Obr-076799	Oryza brachyantha	90.86	0.00e+00	1165.00
IUUC-Ogl-077134	Oryza glaberrima	93.22	0.00e+00	1154.00
IUUC-Ogu-078655	Oryza glumaepatula	95.71	0.00e+00	1146.00
IUUC-Oin-079654	Oryza indica	93.22	0.00e+00	1125.00
IUUC-Olo-080706	Oryza longistaminata	98.77	0.00e+00	1160.00
IUUC-Ome-081716	Oryza meridionalis	91.94	0.00e+00	1074.00
IUUC-Oni-082508	Oryza nivara	90.76	0.00e+00	1103.00
IUUC-Oru-084453	Oryza rufipogon	98.77	0.00e+00	1160.00
IUUC-Osa-085811	Oryza sativa	93.22	0.00e+00	1154.00
IUUC-Ola-087361	Oryzias latipes	43.42	2.00e-146	512.00
IUUC-Oga-088015	Otolemur garnettii	42.60	3.00e-142	498.00
IUUC-Oar-090058	Ovis aries	40.90	2.00e-73	269.00
IUUC-Ptr-090631	Pan troglodytes	42.35	1.00e-54	206.00
IUUC-Pan-092306	Papio anubis	42.49	3.00e-140	491.00
IUUC-Pma-094622	Petromyzon marinus	43.41	7.00e-148	516.00
IUUC-Pno-094794	Phaeosphaeria nodorum	36.12	6.00e-105	374.00
IUUC-Ppa-095528	Physcomitrella patens	56.11	6.00e-144	503.00
IUUC-Pfo-096682	Poecilia formosa	42.63	2.00e-145	509.00
IUUC-Pab-097939	Pongo abelii	42.25	4.00e-128	451.00
IUUC-Pop-099043	Populus trichocarpa	66.61	0.00e+00	758.00
IUUC-Pca-100333	Procavia capensis	42.76	2.00e-137	482.00
IUUC-Ppe-102078	Prunus persica	60.52	0.00e+00	765.00
IUUC-Pgr-103525	Puccinia graminis	41.98	3.00e-125	442.00
IUUC-Ptt-103929	Puccinia triticina	41.38	7.00e-120	424.00
IUUC-Pte-104029	Pyrenophora teres	39.04	7.00e-125	441.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	39.20	2.00e-125	442.00
IUUC-Rno-105248	Rattus norvegicus	43.16	4.00e-138	484.00
IUUC-Sce-106381	Saccharomyces cerevisiae	37.19	3.00e-124	438.00
IUUC-Sha-106519	Sarcophilus harrisii	44.10	3.00e-144	504.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	39.01	3.00e-118	418.00
IUUC-Spo-108071	Schizosaccharomyces pombe	38.09	7.00e-116	410.00
IUUC-Smo-108881	Selaginella moellendorffii	58.51	0.00e+00	697.00
IUUC-Sit-109742	Setaria italica	83.41	0.00e+00	1081.00
IUUC-Sly-110970	Solanum lycopersicum	72.89	1.00e-149	522.00
IUUC-Stu-112593	Solanum tuberosum	66.07	0.00e+00	836.00
IUUC-Sar-113123	Sorex araneus	36.99	2.00e-52	199.00
IUUC-Sbi-113945	Sorghum bicolor	82.97	0.00e+00	1048.00
IUUC-Sre-115188	Sporisorium reilianum	42.82	4.00e-77	282.00
IUUC-Ssc-115352	Sus scrofa	42.83	2.00e-141	495.00
IUUC-Tru-117685	Takifugu rubripes	42.63	2.00e-145	508.00
IUUC-Tni-119982	Tetraodon nigroviridis	42.03	3.00e-139	488.00
IUUC-Tca-121664	Theobroma cacao	64.22	0.00e+00	845.00
IUUC-Tre-122229	Trichoderma reesei	40.09	5.00e-113	401.00
IUUC-Tvi-122576	Trichoderma virens	40.25	2.00e-116	412.00
IUUC-Tae-124110	Triticum aestivum	81.14	0.00e+00	962.00
IUUC-Tur-126781	Triticum urartu	84.63	0.00e+00	946.00
IUUC-Tme-127080	Tuber melanosporum	41.64	5.00e-139	487.00
IUUC-Ttr-128514	Tursiops truncatus	44.15	1.00e-86	313.00
IUUC-Uma-129556	Ustilago maydis	43.09	2.00e-75	276.00
IUUC-Vda-129715	Verticillium dahliae	40.12	2.00e-123	436.00
IUUC-Vvi-131211	Vitis vinifera	64.73	0.00e+00	816.00
IUUC-Xma-133883	Xiphophorus maculatus	42.47	2.00e-139	488.00
IUUC-Yli-134438	Yarrowia lipolytica	38.12	6.00e-119	421.00
IUUC-Zma-135341	Zea mays	64.55	0.00e+00	810.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence