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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108071
UUCD1 version UUC-ScP-00010
Ensembl Protein ID SPBC4F6.13c.1:pep
UniProt Accession O74399; ERB1_SCHPO
Genbank Protein ID CAA20733.2
Protein Name Ribosome biogenesis protein erb1; Eukaryotic ribosome biogenesis protein 1
Genbank Nucleotide ID CU329671
Gene Name erb1; SPBC4F6.13c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPBC4F6.13c SPBC4F6.13c.1 SPBC4F6.13c.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex
Post-translational Modifications (PTMs)
dbPAFdbPTMUniProt
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.20e-12 45.7 381 418
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gH+++v+cl+   s++ l+sG+dDg++++W++ tg+++
   Q: 381  GHKGRVRCLSVhvSGNWLASGGDDGVLRIWEVMTGRCV 418
           8********9997779********************97 PP
   
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
 Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
Protein Sequence
(Fasta)
METGMNRKRS RSKRANSNVG VEKDKEKEKS KGVSNVPNEV ETESSSHEPS FKKDVDEEIP 60
SLTAELSEEE EGEYSSESGR STPELSPDDF EDADDEEEFE EIDAGYSSDS STEDVAPGLY 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108071|E3,WD_repeat|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCTATATTA TTTAATGACA CTCGGTATAT TATCATTTCG TTGCAAATCC TTATACATGT 60
TAACGGAAGC GTACTCTACT TTGCAGAAAA AGCAAAAAGA AACTTTGAAC AGGAACTAAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108071|E3,WD_repeat|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08145--BOP1NT
PF00400--WD40
SMART

SM01035--BOP1NT
SM00320--WD40
Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0042254--P:ribosome biogenesis
KEGG spo:SPBC4F6.13c
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001158 Aegilops tauschii 37.83 8.00e-106 375.00
IUUC-Aml-001507 Ailuropoda melanoleuca 38.90 1.00e-120 424.00
IUUC-Atr-003141 Amborella trichopoda 35.10 8.00e-66 242.00
IUUC-Apl-003545 Anas platyrhynchos 37.73 5.00e-114 402.00
IUUC-Aly-005649 Arabidopsis lyrata 42.19 1.00e-139 488.00
IUUC-Ath-007625 Arabidopsis thaliana 41.41 3.00e-132 464.00
IUUC-Ago-007958 Ashbya gossypii 44.23 5.00e-175 605.00
IUUC-Acl-008344 Aspergillus clavatus 47.05 5.00e-152 529.00
IUUC-Afl-008616 Aspergillus flavus 46.43 6.00e-156 542.00
IUUC-Afu-009083 Aspergillus fumigatus 46.44 3.00e-144 503.00
IUUC-Ani-009365 Aspergillus nidulans 44.93 6.00e-152 529.00
IUUC-Ang-009796 Aspergillus niger 46.50 8.00e-151 525.00
IUUC-Aor-010015 Aspergillus oryzae 46.43 7.00e-156 542.00
IUUC-Ate-010537 Aspergillus terreus 46.81 3.00e-158 550.00
IUUC-Ame-011767 Astyanax mexicanus 56.68 1.00e-75 273.00
IUUC-Bgr-012286 Blumeria graminis 46.38 2.00e-158 551.00
IUUC-Bta-013569 Bos taurus 42.12 3.00e-137 480.00
IUUC-Bci-013820 Botrytis cinerea 45.15 5.00e-145 506.00
IUUC-Bdi-014477 Brachypodium distachyon 40.76 7.00e-135 472.00
IUUC-Bol-016099 Brassica oleracea 40.35 3.00e-134 470.00
IUUC-Bra-017174 Brassica rapa 40.88 3.00e-135 474.00
IUUC-Cel-018201 Caenorhabditis elegans 35.97 2.00e-114 404.00
IUUC-Cja-019009 Callithrix jacchus 36.19 6.00e-109 386.00
IUUC-Cfa-020173 Canis familiaris 38.91 9.00e-123 432.00
IUUC-Cpo-021796 Cavia porcellus 41.69 8.00e-137 478.00
IUUC-Cre-022650 Chlamydomonas reinhardtii 41.72 6.00e-123 432.00
IUUC-Csa-023440 Chlorocebus sabaeus 43.04 1.00e-142 498.00
IUUC-Cin-025782 Ciona intestinalis 39.01 1.00e-134 471.00
IUUC-Csv-026352 Ciona savignyi 39.75 3.00e-132 463.00
IUUC-Cgl-026393 Colletotrichum gloeosporioides 41.47 5.00e-132 462.00
IUUC-Cne-027004 Cryptococcus neoformans 45.01 3.00e-164 570.00
IUUC-Cme-027242 Cyanidioschyzon merolae 34.87 1.00e-104 371.00
IUUC-Dre-028658 Danio rerio 41.35 1.00e-142 498.00
IUUC-Dno-028883 Dasypus novemcinctus 41.94 5.00e-137 479.00
IUUC-Dor-031031 Dipodomys ordii 41.69 3.00e-139 487.00
IUUC-Dse-031443 Dothistroma septosporum 44.62 8.00e-156 541.00
IUUC-Dme-031786 Drosophila melanogaster 40.48 2.00e-145 507.00
IUUC-Eca-033677 Equus caballus 42.34 2.00e-134 471.00
IUUC-Eeu-035310 Erinaceus europaeus 37.52 6.00e-97 345.00
IUUC-Fca-035888 Felis catus 40.53 4.00e-132 463.00
IUUC-Fal-037438 Ficedula albicollis 42.38 5.00e-118 416.00
IUUC-Fox-037973 Fusarium oxysporum 45.23 4.00e-163 566.00
IUUC-Fso-038187 Fusarium solani 45.54 6.00e-163 565.00
IUUC-Gmo-039114 Gadus morhua 39.88 5.00e-128 449.00
IUUC-Ggr-039746 Gaeumannomyces graminis 46.39 3.00e-165 573.00
IUUC-Gga-040631 Gallus gallus 43.96 8.00e-89 318.00
IUUC-Gac-042582 Gasterosteus aculeatus 42.15 3.00e-132 463.00
IUUC-Gma-044307 Glycine max 40.99 9.00e-131 458.00
IUUC-Ggo-045587 Gorilla gorilla 42.90 1.00e-142 498.00
IUUC-Hsa-046319 Homo sapiens 42.90 8.00e-143 498.00
IUUC-Hvu-047526 Hordeum vulgare 40.95 4.00e-126 443.00
IUUC-Itr-048683 Ictidomys tridecemlineatus 41.26 1.00e-134 472.00
IUUC-Kpa-049221 Komagataella pastoris 45.48 5.00e-168 582.00
IUUC-Lch-049640 Latimeria chalumnae 40.52 7.00e-145 505.00
IUUC-Lpe-051135 Leersia perrieri 37.44 2.00e-107 381.00
IUUC-Loc-051930 Lepisosteus oculatus 41.82 2.00e-146 510.00
IUUC-Lma-053290 Leptosphaeria maculans 45.81 1.00e-157 548.00
IUUC-Laf-053903 Loxodonta africana 38.50 2.00e-114 404.00
IUUC-Mcc-055471 Macaca mulatta 43.19 2.00e-143 500.00
IUUC-Meu-056190 Macropus eugenii 42.16 5.00e-136 476.00
IUUC-Mor-057135 Magnaporthe oryzae 44.48 2.00e-153 533.00
IUUC-Mpo-057475 Magnaporthe poae 45.40 3.00e-162 563.00
IUUC-Mtr-058689 Medicago truncatula 37.62 6.00e-117 412.00
IUUC-Mla-059149 Melampsora laricipopulina 44.16 7.00e-155 538.00
IUUC-Mga-059645 Meleagris gallopavo 38.66 2.00e-51 193.00
IUUC-Mvi-060485 Microbotryum violaceum 41.78 8.00e-144 503.00
IUUC-Mmr-061674 Microcebus murinus 41.03 3.00e-135 473.00
IUUC-Mdo-062973 Monodelphis domestica 41.49 3.00e-141 493.00
IUUC-Mmu-064180 Mus musculus 40.91 6.00e-137 479.00
IUUC-Mac-064535 Musa acuminata 34.96 1.00e-77 282.00
IUUC-Mpu-066406 Mustela putorius furo 42.45 4.00e-139 486.00
IUUC-Mlu-067795 Myotis lucifugus 40.66 9.00e-131 458.00
IUUC-Nfi-068516 Neosartorya fischeri 46.37 7.00e-136 476.00
IUUC-Ncr-068767 Neurospora crassa 45.75 8.00e-147 512.00
IUUC-Opr-071084 Ochotona princeps 37.33 2.00e-48 184.00
IUUC-Ont-071614 Oreochromis niloticus 41.74 8.00e-144 502.00
IUUC-Oba-075980 Oryza barthii 37.64 3.00e-109 387.00
IUUC-Obr-076799 Oryza brachyantha 40.09 5.00e-128 449.00
IUUC-Ogl-077134 Oryza glaberrima 39.97 1.00e-123 435.00
IUUC-Ogu-078655 Oryza glumaepatula 38.12 1.00e-116 411.00
IUUC-Oin-079654 Oryza indica 39.94 2.00e-123 434.00
IUUC-Olo-080706 Oryza longistaminata 43.73 8.00e-67 246.00
IUUC-Ome-081716 Oryza meridionalis 43.41 2.00e-66 244.00
IUUC-Oni-082508 Oryza nivara 38.02 3.00e-114 403.00
IUUC-Opu-083707 Oryza punctata 43.73 2.00e-66 245.00
IUUC-Oru-084453 Oryza rufipogon 43.73 8.00e-67 246.00
IUUC-Osa-085811 Oryza sativa 39.81 2.00e-123 434.00
IUUC-Ola-087361 Oryzias latipes 42.15 2.00e-143 501.00
IUUC-Oga-088015 Otolemur garnettii 41.69 3.00e-145 506.00
IUUC-Oar-090058 Ovis aries 56.89 1.00e-55 209.00
IUUC-Ptr-090631 Pan troglodytes 38.21 1.00e-44 171.00
IUUC-Pan-092306 Papio anubis 43.12 4.00e-142 496.00
IUUC-Pma-094622 Petromyzon marinus 42.57 2.00e-147 513.00
IUUC-Pno-094794 Phaeosphaeria nodorum 42.18 9.00e-144 501.00
IUUC-Ppa-095528 Physcomitrella patens 35.48 3.00e-70 257.00
IUUC-Pfo-096682 Poecilia formosa 42.38 5.00e-146 509.00
IUUC-Pab-097939 Pongo abelii 44.48 3.00e-137 479.00
IUUC-Pop-099530 Populus trichocarpa 42.36 9.00e-125 438.00
IUUC-Pca-100333 Procavia capensis 40.91 4.00e-137 479.00
IUUC-Ppe-102078 Prunus persica 38.64 5.00e-125 439.00
IUUC-Pgr-103525 Puccinia graminis 42.54 2.00e-146 511.00
IUUC-Ptt-103929 Puccinia triticina 42.25 6.00e-141 493.00
IUUC-Pte-104029 Pyrenophora teres 47.16 6.00e-172 595.00
IUUC-Pyt-104446 Pyrenophora triticirepentis 47.31 2.00e-172 597.00
IUUC-Rno-105248 Rattus norvegicus 42.15 2.00e-137 481.00
IUUC-Sce-106381 Saccharomyces cerevisiae 43.70 9.00e-169 585.00
IUUC-Sha-106519 Sarcophilus harrisii 42.16 4.00e-141 493.00
IUUC-Sja-107908 Schizosaccharomyces japonicus 65.50 0.00e+00 857.00
IUUC-Smo-109604 Selaginella moellendorffii 40.21 1.00e-120 425.00
IUUC-Sit-110551 Setaria italica 40.88 1.00e-129 455.00
IUUC-Sly-110970 Solanum lycopersicum 42.86 2.00e-70 258.00
IUUC-Stu-112593 Solanum tuberosum 42.23 3.00e-135 473.00
IUUC-Sar-113123 Sorex araneus 54.76 1.00e-64 237.00
IUUC-Sbi-113945 Sorghum bicolor 40.60 2.00e-132 464.00
IUUC-Sre-115188 Sporisorium reilianum 42.32 5.00e-148 516.00
IUUC-Ssc-115352 Sus scrofa 42.02 8.00e-140 488.00
IUUC-Tru-117685 Takifugu rubripes 43.06 9.00e-147 511.00
IUUC-Tni-119982 Tetraodon nigroviridis 42.12 3.00e-138 483.00
IUUC-Tca-121664 Theobroma cacao 42.55 6.00e-136 476.00
IUUC-Tre-122229 Trichoderma reesei 44.65 2.00e-141 493.00
IUUC-Tvi-122576 Trichoderma virens 45.85 1.00e-145 508.00
IUUC-Tae-124110 Triticum aestivum 41.34 1.00e-119 422.00
IUUC-Tur-126781 Triticum urartu 37.12 6.00e-103 366.00
IUUC-Tme-127080 Tuber melanosporum 49.70 0.00e+00 635.00
IUUC-Ttr-128514 Tursiops truncatus 35.41 8.00e-104 369.00
IUUC-Uma-129556 Ustilago maydis 42.32 7.00e-150 522.00
IUUC-Vda-129715 Verticillium dahliae 46.28 5.00e-160 556.00
IUUC-Vvi-131211 Vitis vinifera 40.19 2.00e-123 434.00
IUUC-Xma-133883 Xiphophorus maculatus 41.93 3.00e-141 493.00
IUUC-Yli-134438 Yarrowia lipolytica 44.31 6.00e-159 552.00
IUUC-Zma-135341 Zea mays 35.64 8.00e-116 409.00
Created Date 25-Jun-2017

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