iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ztr-136340

Ensembl Protein ID

Mycgr3P54508

UniProt Accession

F9WX86; F9WX86_ZYMTI

Genbank Protein ID

EGP91782.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

CM001196

Gene Name

ERB1; MYCGRDRAFT_54508

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Mycgr3G54508	Mycgr3T54508	Mycgr3P54508

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-15	53.9	344	379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+++a  +  ++++sG+dDgt +vWDl + +
   Q: 344  GHEGRVRSIAVhPAgRYVASGGDDGTARVWDLQQSR 379
           8*********996669***************98766 PP

Organism

Zymoseptoria tritici

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MKTDSDSKKS SSAPSGLFDD EERSNFRIEE DANGNERYIY DEINPVYDSD DSDAREATNT 60
IGDIPMSYYD AYPHIGYDIN GKRIQRPAKG HALDSLLDSI DIPEGWTGLT DPATGKPLNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGATGAGG AAGACGATGT GCTCGGCGGT GAGGAGTTGA ACGGTGCATT CGACGAGGGC 60
GGAAGTGAGG CCGAGAGCAG CGACAATTCG TTCGAAGATC AGGAGGACGA TGGAGAAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ztr:MYCGRDRAFT_54508

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	36.10	2.00e-98	351.00
IUUC-Aml-001507	Ailuropoda melanoleuca	37.60	3.00e-117	414.00
IUUC-Atr-003141	Amborella trichopoda	36.50	3.00e-66	244.00
IUUC-Apl-003545	Anas platyrhynchos	37.91	9.00e-111	392.00
IUUC-Aly-005649	Arabidopsis lyrata	38.20	1.00e-122	431.00
IUUC-Ath-007625	Arabidopsis thaliana	37.32	2.00e-117	414.00
IUUC-Ago-007958	Ashbya gossypii	50.29	0.00e+00	678.00
IUUC-Acl-008344	Aspergillus clavatus	62.96	0.00e+00	788.00
IUUC-Afl-008616	Aspergillus flavus	62.21	0.00e+00	807.00
IUUC-Afu-009083	Aspergillus fumigatus	62.06	0.00e+00	768.00
IUUC-Ani-009365	Aspergillus nidulans	62.96	0.00e+00	799.00
IUUC-Ang-009796	Aspergillus niger	61.68	0.00e+00	782.00
IUUC-Aor-010015	Aspergillus oryzae	62.21	0.00e+00	807.00
IUUC-Ate-010537	Aspergillus terreus	62.21	0.00e+00	805.00
IUUC-Ame-011767	Astyanax mexicanus	47.46	9.00e-67	244.00
IUUC-Bgr-012286	Blumeria graminis	60.18	0.00e+00	812.00
IUUC-Bta-013569	Bos taurus	39.47	8.00e-129	452.00
IUUC-Bci-013820	Botrytis cinerea	61.86	0.00e+00	787.00
IUUC-Bdi-014477	Brachypodium distachyon	38.22	4.00e-122	430.00
IUUC-Bol-016099	Brassica oleracea	37.89	8.00e-123	432.00
IUUC-Bra-017174	Brassica rapa	37.58	2.00e-121	429.00
IUUC-Cel-018201	Caenorhabditis elegans	36.06	2.00e-107	381.00
IUUC-Cja-019009	Callithrix jacchus	40.05	1.00e-75	275.00
IUUC-Cfa-020173	Canis familiaris	36.36	4.00e-117	413.00
IUUC-Cpo-021796	Cavia porcellus	40.09	9.00e-131	458.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	39.88	3.00e-115	407.00
IUUC-Csa-023440	Chlorocebus sabaeus	39.94	1.00e-135	474.00
IUUC-Cin-025782	Ciona intestinalis	39.21	3.00e-137	480.00
IUUC-Csv-026352	Ciona savignyi	39.23	7.00e-135	472.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	58.35	0.00e+00	704.00
IUUC-Cne-027004	Cryptococcus neoformans	47.11	3.00e-170	590.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.73	2.00e-100	357.00
IUUC-Dre-028658	Danio rerio	41.04	1.00e-141	494.00
IUUC-Dno-028883	Dasypus novemcinctus	40.03	1.00e-133	468.00
IUUC-Dor-031031	Dipodomys ordii	39.97	1.00e-135	474.00
IUUC-Dse-031443	Dothistroma septosporum	73.32	0.00e+00	989.00
IUUC-Dme-031786	Drosophila melanogaster	40.60	4.00e-144	503.00
IUUC-Eca-033677	Equus caballus	39.63	2.00e-130	457.00
IUUC-Eeu-035310	Erinaceus europaeus	36.95	5.00e-95	339.00
IUUC-Fca-035888	Felis catus	39.72	2.00e-130	457.00
IUUC-Fal-037438	Ficedula albicollis	39.72	3.00e-102	363.00
IUUC-Fox-037973	Fusarium oxysporum	61.70	0.00e+00	840.00
IUUC-Fso-038187	Fusarium solani	62.26	0.00e+00	846.00
IUUC-Gmo-039114	Gadus morhua	39.56	1.00e-122	431.00
IUUC-Ggr-039746	Gaeumannomyces graminis	60.09	0.00e+00	829.00
IUUC-Gga-040631	Gallus gallus	40.56	6.00e-80	288.00
IUUC-Gac-042582	Gasterosteus aculeatus	40.43	3.00e-131	460.00
IUUC-Gma-044307	Glycine max	40.24	3.00e-127	447.00
IUUC-Ggo-045587	Gorilla gorilla	39.69	7.00e-136	475.00
IUUC-Hsa-046319	Homo sapiens	39.94	9.00e-136	475.00
IUUC-Hvu-047526	Hordeum vulgare	38.01	2.00e-117	414.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	39.94	2.00e-131	461.00
IUUC-Kpa-049221	Komagataella pastoris	47.38	2.00e-176	610.00
IUUC-Lch-049640	Latimeria chalumnae	40.00	4.00e-146	509.00
IUUC-Lpe-051135	Leersia perrieri	35.35	8.00e-96	342.00
IUUC-Loc-051930	Lepisosteus oculatus	41.65	1.00e-143	501.00
IUUC-Lma-053290	Leptosphaeria maculans	64.34	0.00e+00	833.00
IUUC-Laf-053903	Loxodonta africana	36.53	5.00e-112	396.00
IUUC-Mcc-055471	Macaca mulatta	39.78	7.00e-136	476.00
IUUC-Meu-056190	Macropus eugenii	39.63	1.00e-132	465.00
IUUC-Mor-057135	Magnaporthe oryzae	61.65	0.00e+00	795.00
IUUC-Mpo-057475	Magnaporthe poae	59.74	0.00e+00	799.00
IUUC-Mtr-058689	Medicago truncatula	38.07	6.00e-113	399.00
IUUC-Mla-059149	Melampsora laricipopulina	47.58	4.00e-174	602.00
IUUC-Mga-059645	Meleagris gallopavo	35.32	2.00e-43	167.00
IUUC-Mvi-060485	Microbotryum violaceum	42.75	2.00e-142	499.00
IUUC-Mmr-061674	Microcebus murinus	39.47	6.00e-129	452.00
IUUC-Mdo-062973	Monodelphis domestica	40.09	8.00e-138	482.00
IUUC-Mmu-064180	Mus musculus	39.94	3.00e-135	473.00
IUUC-Mac-064535	Musa acuminata	35.84	6.00e-71	260.00
IUUC-Mpu-066406	Mustela putorius furo	39.16	1.00e-131	462.00
IUUC-Mlu-067795	Myotis lucifugus	39.47	7.00e-123	432.00
IUUC-Nfi-068516	Neosartorya fischeri	61.66	0.00e+00	734.00
IUUC-Ncr-068767	Neurospora crassa	60.36	0.00e+00	743.00
IUUC-Opr-071084	Ochotona princeps	40.74	1.00e-44	171.00
IUUC-Ont-071614	Oreochromis niloticus	40.47	7.00e-141	492.00
IUUC-Oba-075980	Oryza barthii	36.90	6.00e-107	379.00
IUUC-Obr-076799	Oryza brachyantha	39.07	9.00e-123	432.00
IUUC-Ogl-077134	Oryza glaberrima	39.69	5.00e-119	419.00
IUUC-Ogu-078655	Oryza glumaepatula	37.67	1.00e-112	398.00
IUUC-Oin-079654	Oryza indica	39.38	7.00e-119	419.00
IUUC-Olo-080706	Oryza longistaminata	40.00	8.00e-63	233.00
IUUC-Ome-081716	Oryza meridionalis	39.15	7.00e-63	233.00
IUUC-Oni-082508	Oryza nivara	37.05	2.00e-106	377.00
IUUC-Opu-083707	Oryza punctata	39.44	1.00e-62	232.00
IUUC-Oru-084453	Oryza rufipogon	40.00	8.00e-63	233.00
IUUC-Osa-085811	Oryza sativa	39.38	4.00e-119	420.00
IUUC-Ola-087361	Oryzias latipes	42.18	1.00e-141	495.00
IUUC-Oga-088015	Otolemur garnettii	39.63	8.00e-137	479.00
IUUC-Oar-090058	Ovis aries	47.90	1.00e-47	182.00
IUUC-Ptr-090631	Pan troglodytes	38.68	1.00e-53	201.00
IUUC-Pan-092306	Papio anubis	39.72	3.00e-134	470.00
IUUC-Pma-094622	Petromyzon marinus	39.84	3.00e-141	493.00
IUUC-Pno-094794	Phaeosphaeria nodorum	59.11	0.00e+00	781.00
IUUC-Ppa-095528	Physcomitrella patens	34.47	9.00e-69	252.00
IUUC-Pfo-096682	Poecilia formosa	40.49	6.00e-143	499.00
IUUC-Pab-097939	Pongo abelii	39.63	4.00e-120	423.00
IUUC-Pop-099043	Populus trichocarpa	40.96	2.00e-112	397.00
IUUC-Pca-100333	Procavia capensis	39.16	5.00e-130	456.00
IUUC-Ppe-102078	Prunus persica	39.19	2.00e-121	427.00
IUUC-Pgr-103525	Puccinia graminis	45.12	8.00e-162	562.00
IUUC-Ptt-103929	Puccinia triticina	44.43	1.00e-155	541.00
IUUC-Pte-104029	Pyrenophora teres	64.00	0.00e+00	879.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	63.93	0.00e+00	880.00
IUUC-Rno-105248	Rattus norvegicus	40.09	1.00e-135	475.00
IUUC-Sce-106381	Saccharomyces cerevisiae	50.29	0.00e+00	687.00
IUUC-Sha-106519	Sarcophilus harrisii	40.03	1.00e-138	484.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	45.85	5.00e-154	536.00
IUUC-Spo-108071	Schizosaccharomyces pombe	45.58	6.00e-157	545.00
IUUC-Smo-109604	Selaginella moellendorffii	37.20	5.00e-109	386.00
IUUC-Sit-110551	Setaria italica	38.10	2.00e-118	417.00
IUUC-Sly-110970	Solanum lycopersicum	39.45	4.00e-66	243.00
IUUC-Stu-112593	Solanum tuberosum	39.56	7.00e-126	442.00
IUUC-Sar-113123	Sorex araneus	42.37	8.00e-55	205.00
IUUC-Sbi-113945	Sorghum bicolor	38.10	2.00e-121	427.00
IUUC-Sre-115188	Sporisorium reilianum	42.88	4.00e-154	536.00
IUUC-Ssc-115352	Sus scrofa	40.16	3.00e-134	469.00
IUUC-Tru-117685	Takifugu rubripes	40.99	2.00e-143	501.00
IUUC-Tni-119982	Tetraodon nigroviridis	41.72	3.00e-138	483.00
IUUC-Tca-121664	Theobroma cacao	39.23	2.00e-123	434.00
IUUC-Tre-122229	Trichoderma reesei	60.09	0.00e+00	716.00
IUUC-Tvi-122576	Trichoderma virens	59.23	0.00e+00	729.00
IUUC-Tae-124110	Triticum aestivum	38.85	9.00e-112	395.00
IUUC-Tur-126781	Triticum urartu	35.93	7.00e-95	339.00
IUUC-Tme-127080	Tuber melanosporum	58.57	0.00e+00	772.00
IUUC-Ttr-128514	Tursiops truncatus	35.79	4.00e-74	270.00
IUUC-Uma-129556	Ustilago maydis	42.80	4.00e-153	533.00
IUUC-Vda-129715	Verticillium dahliae	60.91	0.00e+00	803.00
IUUC-Vvi-131211	Vitis vinifera	37.85	5.00e-115	406.00
IUUC-Xma-133883	Xiphophorus maculatus	39.88	2.00e-138	484.00
IUUC-Yli-134438	Yarrowia lipolytica	49.43	0.00e+00	637.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence