iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114681

Ensembl Protein ID

Sb03g031520.1

UniProt Accession

C5XGU1; C5XGU1_SORBI

Genbank Protein ID

EES01286.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G261100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g031520	Sb03g031520.1	Sb03g031520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-44	148.1	163	201
UBD/Beta-Prp	6.00e-55	187.3	15	288

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWDlrtgvl 35
           gH+++v+c++f  ++  +++vsGs+D ++kvW+l+ ++l
   Q: 163  GHNGWVSCVRFspNTyqPTIVSGSWDRSVKVWNLTNCKL 201
           8***********6334677***************98876 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl..............lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcv 87
             h +v+t+++  +++++l++++srd+++ vwd++++                lr+l gh+ +v++v +s+dg++ ++gs D+ +++w+l tg+++
   Q: 15   RGHNGVVTAIATpIDNSDLIVSSSRDKSLLVWDLRNPVQaagdgtttadygvpLRRLTGHSHFVQDVVLSSDGQFALSGSWDGDLRLWNLTTGETT 110
           55889*******************************9999******************************************************** PP
   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee......tlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrtl 175
             + ghe++vls++fs+++  +vs+s+drti++w++  g+c ++        +gh+g+v+cv+++p++    +vsGs Dr v++W+l + kl  tl
   Q: 111  CRFVGHEKDVLSVAFSADNRQIVSASRDRTIKLWNTL-GECKYTiggdlgGAEGHNGWVSCVRFSPNTyqPTIVSGSWDRSVKVWNLTNCKLRCTL 205
           **********************************665.5566666****99***************998789****************99****** PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlq 261
           +g h ++v+ ++++++g  ++sg++d    lwdl +g+ +++l +  d + s+ fs  + + ++++  +si+iWdl+s+ +++ l+
   Q: 206  QG-HGGYVNAVAVSPDGSLCASGGKDHVTLLWDLTEGKRLYALDAG-DIIHSLCFS-PNRYWLCAATQESIKIWDLESKHVVQDLK 288
           *9.**************************************99875.688999999.7788889999************9998775 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAGAQETLVL AGVMRGHNGV VTAIATPIDN SDLIVSSSRD KSLLVWDLRN PVQAAGDGTT 60
TADYGVPLRR LTGHSHFVQD VVLSSDGQFA LSGSWDGDLR LWNLTTGETT CRFVGHEKDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGTGTTCCT TCCCTTCTCA CTCAGCGCCG CCGCGGCTCT ACCCTAACCC TCCCCACCAC 60
CATGGCCGGC GCACAGGAGA CCCTGGTGCT CGCCGGCGTG ATGCGCGGCC ACAACGGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005886--C:plasma membrane
GO:0050832--P:defense response to fungus
GO:0060267--P:positive regulation of respiratory burst

KEGG

sbi:SORBI_03g031520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001935	Ailuropoda melanoleuca	63.08	2.00e-116	411.00
IUUC-Apl-003918	Anas platyrhynchos	64.60	2.00e-106	377.00
IUUC-Aca-004869	Anolis carolinensis	63.08	2.00e-116	411.00
IUUC-Ago-007720	Ashbya gossypii	46.53	3.00e-83	301.00
IUUC-Acl-008156	Aspergillus clavatus	59.26	4.00e-108	383.00
IUUC-Afl-008684	Aspergillus flavus	59.57	6.00e-109	385.00
IUUC-Afu-008867	Aspergillus fumigatus	59.57	4.00e-109	386.00
IUUC-Ani-009221	Aspergillus nidulans	59.57	6.00e-109	385.00
IUUC-Ang-009843	Aspergillus niger	59.88	4.00e-109	386.00
IUUC-Aor-010193	Aspergillus oryzae	59.57	6.00e-109	385.00
IUUC-Ate-010420	Aspergillus terreus	59.60	4.00e-100	356.00
IUUC-Ame-011199	Astyanax mexicanus	63.69	3.00e-116	410.00
IUUC-Bgr-012064	Blumeria graminis	58.64	1.00e-107	382.00
IUUC-Bta-013357	Bos taurus	63.08	2.00e-116	411.00
IUUC-Bci-013862	Botrytis cinerea	59.26	2.00e-107	380.00
IUUC-Bdi-015057	Brachypodium distachyon	84.94	8.00e-160	555.00
IUUC-Cel-018335	Caenorhabditis elegans	58.54	1.00e-94	338.00
IUUC-Cja-019914	Callithrix jacchus	63.08	2.00e-116	411.00
IUUC-Cfa-020755	Canis familiaris	63.08	2.00e-116	411.00
IUUC-Cpo-022377	Cavia porcellus	63.08	1.00e-116	411.00
IUUC-Csa-023025	Chlorocebus sabaeus	63.38	2.00e-116	410.00
IUUC-Cin-025647	Ciona intestinalis	60.37	1.00e-107	381.00
IUUC-Csv-026027	Ciona savignyi	60.67	1.00e-107	381.00
IUUC-Cgl-026718	Colletotrichum gloeosporioides	60.40	1.00e-99	355.00
IUUC-Cne-026930	Cryptococcus neoformans	60.12	1.00e-111	395.00
IUUC-Cme-027251	Cyanidioschyzon merolae	54.32	6.00e-101	359.00
IUUC-Dre-028669	Danio rerio	62.15	2.00e-114	404.00
IUUC-Dno-029470	Dasypus novemcinctus	54.77	3.00e-89	321.00
IUUC-Dor-031098	Dipodomys ordii	57.23	1.00e-87	315.00
IUUC-Dse-031255	Dothistroma septosporum	58.95	2.00e-106	377.00
IUUC-Dme-032118	Drosophila melanogaster	60.49	2.00e-111	394.00
IUUC-Eca-033296	Equus caballus	67.74	1.00e-57	214.00
IUUC-Eeu-034771	Erinaceus europaeus	60.31	2.00e-109	387.00
IUUC-Fca-036315	Felis catus	63.08	2.00e-116	411.00
IUUC-Fal-036990	Ficedula albicollis	63.91	2.00e-61	228.00
IUUC-Fox-037702	Fusarium oxysporum	58.77	1.00e-107	381.00
IUUC-Fso-038384	Fusarium solani	59.69	2.00e-108	384.00
IUUC-Gmo-039630	Gadus morhua	64.00	5.00e-114	402.00
IUUC-Ggr-039985	Gaeumannomyces graminis	58.95	2.00e-107	380.00
IUUC-Gga-040540	Gallus gallus	63.08	2.00e-116	411.00
IUUC-Gac-041316	Gasterosteus aculeatus	61.63	1.00e-114	405.00
IUUC-Ggo-045253	Gorilla gorilla	63.08	2.00e-116	411.00
IUUC-Hsa-046809	Homo sapiens	63.08	2.00e-116	411.00
IUUC-Hvu-047641	Hordeum vulgare	86.45	4.00e-163	566.00
IUUC-Itr-048025	Ictidomys tridecemlineatus	63.08	2.00e-116	411.00
IUUC-Kpa-049214	Komagataella pastoris	49.85	6.00e-84	303.00
IUUC-Lch-049634	Latimeria chalumnae	63.38	2.00e-115	407.00
IUUC-Loc-052163	Lepisosteus oculatus	62.73	2.00e-116	410.00
IUUC-Lma-053113	Leptosphaeria maculans	59.15	4.00e-107	380.00
IUUC-Laf-054422	Loxodonta africana	63.08	2.00e-116	411.00
IUUC-Mcc-055348	Macaca mulatta	63.08	3.00e-116	410.00
IUUC-Meu-056543	Macropus eugenii	62.42	9.00e-117	412.00
IUUC-Mor-057107	Magnaporthe oryzae	59.57	1.00e-108	384.00
IUUC-Mpo-057487	Magnaporthe poae	58.95	2.00e-107	381.00
IUUC-Mla-058909	Melampsora laricipopulina	62.08	7.00e-117	412.00
IUUC-Mga-059387	Meleagris gallopavo	63.08	2.00e-116	411.00
IUUC-Mvi-060392	Microbotryum violaceum	58.72	2.00e-108	384.00
IUUC-Mmr-061141	Microcebus murinus	66.96	1.00e-83	301.00
IUUC-Mdo-062932	Monodelphis domestica	63.08	2.00e-116	411.00
IUUC-Mmu-064132	Mus musculus	63.08	2.00e-116	411.00
IUUC-Mac-064447	Musa acuminata	73.15	6.00e-131	459.00
IUUC-Mpu-066721	Mustela putorius furo	62.15	2.00e-112	397.00
IUUC-Mlu-068221	Myotis lucifugus	62.46	1.00e-106	378.00
IUUC-Nfi-068344	Neosartorya fischeri	59.57	3.00e-109	387.00
IUUC-Ncr-068722	Neurospora crassa	59.88	8.00e-109	385.00
IUUC-Nle-069865	Nomascus leucogenys	63.38	3.00e-116	410.00
IUUC-Opr-071100	Ochotona princeps	53.03	3.00e-89	320.00
IUUC-Ont-072287	Oreochromis niloticus	63.38	2.00e-116	410.00
IUUC-Oan-072788	Ornithorhynchus anatinus	63.08	2.00e-116	411.00
IUUC-Ocu-073844	Oryctolagus cuniculus	61.61	4.00e-111	393.00
IUUC-Ola-086400	Oryzias latipes	63.08	6.00e-116	409.00
IUUC-Oga-088811	Otolemur garnettii	63.08	2.00e-116	411.00
IUUC-Oar-089962	Ovis aries	63.08	2.00e-116	411.00
IUUC-Ptr-091340	Pan troglodytes	63.08	2.00e-116	411.00
IUUC-Pan-091946	Papio anubis	63.69	3.00e-116	410.00
IUUC-Pma-094535	Petromyzon marinus	63.69	3.00e-116	410.00
IUUC-Pno-095100	Phaeosphaeria nodorum	59.82	2.00e-72	264.00
IUUC-Ppa-095752	Physcomitrella patens	70.68	6.00e-131	459.00
IUUC-Pfo-097311	Poecilia formosa	62.42	3.00e-116	410.00
IUUC-Pab-097863	Pongo abelii	63.08	2.00e-116	411.00
IUUC-Pca-100594	Procavia capensis	62.46	5.00e-115	406.00
IUUC-Pva-102746	Pteropus vampyrus	50.00	2.00e-83	301.00
IUUC-Pgr-103375	Puccinia graminis	45.09	3.00e-75	273.00
IUUC-Ptt-103839	Puccinia triticina	60.92	6.00e-113	399.00
IUUC-Pte-104026	Pyrenophora teres	59.15	4.00e-107	380.00
IUUC-Pyt-104584	Pyrenophora triticirepentis	59.15	6.00e-107	379.00
IUUC-Rno-104964	Rattus norvegicus	63.08	2.00e-116	411.00
IUUC-Sce-106224	Saccharomyces cerevisiae	45.15	4.00e-80	290.00
IUUC-Sha-107409	Sarcophilus harrisii	63.08	2.00e-116	411.00
IUUC-Ssl-108479	Sclerotinia sclerotiorum	59.26	2.00e-107	380.00
IUUC-Sit-110060	Setaria italica	88.86	6.00e-176	608.00
IUUC-Sar-113173	Sorex araneus	63.08	2.00e-116	411.00
IUUC-Sre-115107	Sporisorium reilianum	58.66	2.00e-110	390.00
IUUC-Ssc-116218	Sus scrofa	61.23	4.00e-113	400.00
IUUC-Tru-118202	Takifugu rubripes	63.08	4.00e-116	409.00
IUUC-Tni-120260	Tetraodon nigroviridis	63.38	5.00e-117	413.00
IUUC-Tre-121961	Trichoderma reesei	59.69	8.00e-109	385.00
IUUC-Tvi-122447	Trichoderma virens	59.69	9.00e-109	385.00
IUUC-Tae-125589	Triticum aestivum	86.14	1.00e-162	565.00
IUUC-Tme-127105	Tuber melanosporum	55.59	3.00e-99	353.00
IUUC-Tbe-128021	Tupaia belangeri	51.22	7.00e-50	189.00
IUUC-Ttr-128637	Tursiops truncatus	55.08	3.00e-95	340.00
IUUC-Uma-129634	Ustilago maydis	59.26	2.00e-110	390.00
IUUC-Vda-129923	Verticillium dahliae	59.69	3.00e-108	383.00
IUUC-Vpa-130410	Vicugna pacos	71.76	5.00e-68	249.00
IUUC-Xtr-132105	Xenopus tropicalis	64.31	5.00e-118	416.00
IUUC-Xma-133875	Xiphophorus maculatus	63.38	2.00e-116	410.00
IUUC-Yli-134624	Yarrowia lipolytica	54.57	3.00e-98	350.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence