iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005525

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348716

Gene Name

SWA1; ARALYDRAFT_904276

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_403777.1	scaffold_403777.1	scaffold_403777.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-23	82.2	176	211

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtc..laf.sdtllvsGsdDgtikvWDlrtg 33
           gH+d v+c  ++  +d +lv+Gs+D+t+k+WD+r +
   Q: 176  GHKDYVRCgdCSPvNDSMLVTGSYDHTVKLWDTRVD 211
           8*******77776999****************9866 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEEELRVRLN DHQVSKVFPV KPKSTAKPVS KSETPESRYW SSFKNHSIPD LVSSVSALAF 60
SPVHPHSLAV AHSATVSLFS SHSLSSSRRF SFRDVVSSVC FRSDGALFAA CDLSGVVQVF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCTCCCTA CTGTAGAAGA ATGGAGGAAG AGCTTCGTGT TCGGCTGAAT GACCATCAAG 60
TGTCAAAGGT TTTCCCTGTG AAACCAAAAT CAACGGCGAA ACCTGTTTCC AAATCGGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR018983--U3_snoRNA-assocProt_15_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09384--UTP15_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0009561--P:megagametogenesis
GO:0006364--P:rRNA processing

KEGG

aly:ARALYDRAFT_904276

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002117	Ailuropoda melanoleuca	33.13	6.00e-61	227.00
IUUC-Atr-003068	Amborella trichopoda	47.79	3.00e-111	394.00
IUUC-Apl-003926	Anas platyrhynchos	32.21	9.00e-66	243.00
IUUC-Aca-004271	Anolis carolinensis	33.60	2.00e-65	242.00
IUUC-Ath-006954	Arabidopsis thaliana	94.34	0.00e+00	938.00
IUUC-Ago-007973	Ashbya gossypii	31.15	7.00e-48	184.00
IUUC-Acl-008287	Aspergillus clavatus	25.96	2.00e-31	129.00
IUUC-Afl-008504	Aspergillus flavus	26.84	2.00e-39	156.00
IUUC-Afu-008983	Aspergillus fumigatus	32.89	1.00e-30	127.00
IUUC-Ani-009315	Aspergillus nidulans	26.99	5.00e-32	131.00
IUUC-Ang-009690	Aspergillus niger	27.17	3.00e-39	155.00
IUUC-Aor-010181	Aspergillus oryzae	26.84	2.00e-39	156.00
IUUC-Ate-010498	Aspergillus terreus	26.13	5.00e-40	158.00
IUUC-Ame-011814	Astyanax mexicanus	33.92	1.00e-63	236.00
IUUC-Bgr-012273	Blumeria graminis	25.88	1.00e-43	170.00
IUUC-Bta-013068	Bos taurus	33.20	2.00e-62	232.00
IUUC-Bci-013930	Botrytis cinerea	27.82	6.00e-46	177.00
IUUC-Bdi-014876	Brachypodium distachyon	43.83	1.00e-121	429.00
IUUC-Bol-015366	Brassica oleracea	82.40	0.00e+00	801.00
IUUC-Bra-017589	Brassica rapa	81.24	0.00e+00	783.00
IUUC-Cel-018159	Caenorhabditis elegans	25.45	6.00e-37	147.00
IUUC-Cja-019139	Callithrix jacchus	33.40	3.00e-62	231.00
IUUC-Cfa-020742	Canis familiaris	32.40	4.00e-59	221.00
IUUC-Cpo-021707	Cavia porcellus	33.60	1.00e-62	233.00
IUUC-Cre-022665	Chlamydomonas reinhardtii	34.96	9.00e-68	250.00
IUUC-Csa-023024	Chlorocebus sabaeus	33.33	6.00e-62	231.00
IUUC-Cho-024487	Choloepus hoffmanni	37.08	1.00e-41	163.00
IUUC-Cin-025294	Ciona intestinalis	30.94	4.00e-65	241.00
IUUC-Cgl-026388	Colletotrichum gloeosporioides	29.64	2.00e-28	119.00
IUUC-Cne-026945	Cryptococcus neoformans	29.84	2.00e-46	179.00
IUUC-Cme-027108	Cyanidioschyzon merolae	26.89	2.00e-40	159.00
IUUC-Dre-028316	Danio rerio	32.55	9.00e-61	227.00
IUUC-Dno-028985	Dasypus novemcinctus	32.20	1.00e-58	219.00
IUUC-Dor-030219	Dipodomys ordii	28.94	2.00e-30	125.00
IUUC-Dse-031495	Dothistroma septosporum	29.09	9.00e-24	104.00
IUUC-Dme-031769	Drosophila melanogaster	28.91	8.00e-49	187.00
IUUC-Ete-032630	Echinops telfairi	38.98	6.00e-46	177.00
IUUC-Eca-033816	Equus caballus	33.80	9.00e-63	233.00
IUUC-Eeu-034840	Erinaceus europaeus	39.35	2.00e-41	162.00
IUUC-Fca-035751	Felis catus	33.00	6.00e-62	231.00
IUUC-Fal-036733	Ficedula albicollis	32.86	3.00e-68	252.00
IUUC-Fox-037743	Fusarium oxysporum	28.09	6.00e-42	164.00
IUUC-Fso-038395	Fusarium solani	26.69	4.00e-39	155.00
IUUC-Gmo-038803	Gadus morhua	33.56	3.00e-64	238.00
IUUC-Ggr-040092	Gaeumannomyces graminis	36.73	4.00e-32	132.00
IUUC-Gga-040714	Gallus gallus	31.32	1.00e-67	249.00
IUUC-Gac-042640	Gasterosteus aculeatus	31.41	3.00e-65	241.00
IUUC-Gma-043711	Glycine max	56.50	2.00e-144	505.00
IUUC-Ggo-045616	Gorilla gorilla	32.32	6.00e-61	227.00
IUUC-Hsa-046720	Homo sapiens	33.68	2.00e-59	222.00
IUUC-Itr-048796	Ictidomys tridecemlineatus	32.80	3.00e-58	219.00
IUUC-Kpa-049291	Komagataella pastoris	30.62	8.00e-51	194.00
IUUC-Lch-049729	Latimeria chalumnae	34.34	3.00e-64	238.00
IUUC-Lpe-051141	Leersia perrieri	44.44	4.00e-120	424.00
IUUC-Loc-051756	Lepisosteus oculatus	32.73	5.00e-68	251.00
IUUC-Lma-053083	Leptosphaeria maculans	30.27	2.00e-34	139.00
IUUC-Laf-054067	Loxodonta africana	35.25	4.00e-63	234.00
IUUC-Mcc-055096	Macaca mulatta	33.33	6.00e-62	231.00
IUUC-Meu-056604	Macropus eugenii	34.78	9.00e-52	197.00
IUUC-Mor-057186	Magnaporthe oryzae	27.37	1.00e-38	154.00
IUUC-Mtr-058346	Medicago truncatula	58.19	1.00e-164	572.00
IUUC-Mla-059116	Melampsora laricipopulina	29.35	1.00e-55	209.00
IUUC-Mga-060038	Meleagris gallopavo	32.73	3.00e-55	208.00
IUUC-Mvi-060272	Microbotryum violaceum	28.33	1.00e-50	193.00
IUUC-Mmr-060877	Microcebus murinus	33.94	1.00e-63	236.00
IUUC-Mdo-062168	Monodelphis domestica	34.39	4.00e-61	228.00
IUUC-Mmu-063441	Mus musculus	33.93	1.00e-63	236.00
IUUC-Mac-065330	Musa acuminata	51.16	2.00e-109	388.00
IUUC-Mpu-065704	Mustela putorius furo	33.40	2.00e-62	233.00
IUUC-Mlu-067640	Myotis lucifugus	33.80	3.00e-63	235.00
IUUC-Nfi-068589	Neosartorya fischeri	32.89	5.00e-31	128.00
IUUC-Ncr-068769	Neurospora crassa	31.50	4.00e-33	135.00
IUUC-Nle-069105	Nomascus leucogenys	34.22	1.00e-59	223.00
IUUC-Opr-070203	Ochotona princeps	33.00	2.00e-63	236.00
IUUC-Ont-072054	Oreochromis niloticus	32.18	7.00e-66	244.00
IUUC-Oan-073624	Ornithorhynchus anatinus	34.00	3.00e-62	231.00
IUUC-Ocu-074326	Oryctolagus cuniculus	32.80	2.00e-59	223.00
IUUC-Obr-076038	Oryza brachyantha	44.34	2.00e-118	419.00
IUUC-Ogl-077463	Oryza glaberrima	44.86	1.00e-113	402.00
IUUC-Ogu-078631	Oryza glumaepatula	45.08	9.00e-120	423.00
IUUC-Oin-079242	Oryza indica	45.26	1.00e-114	405.00
IUUC-Olo-080652	Oryza longistaminata	42.94	9.00e-106	376.00
IUUC-Ome-081109	Oryza meridionalis	46.12	8.00e-107	381.00
IUUC-Oni-082187	Oryza nivara	45.26	1.00e-114	405.00
IUUC-Opu-083995	Oryza punctata	46.33	7.00e-109	387.00
IUUC-Oru-084962	Oryza rufipogon	46.62	2.00e-109	389.00
IUUC-Osa-086201	Oryza sativa	46.62	2.00e-109	389.00
IUUC-Ola-087115	Oryzias latipes	32.83	2.00e-63	236.00
IUUC-Olu-087842	Ostreococcus lucimarinus	29.98	2.00e-59	222.00
IUUC-Oga-088204	Otolemur garnettii	33.74	3.00e-63	235.00
IUUC-Oar-089297	Ovis aries	33.13	2.00e-59	223.00
IUUC-Ptr-090953	Pan troglodytes	33.33	4.00e-61	228.00
IUUC-Pan-092451	Papio anubis	32.32	9.00e-62	230.00
IUUC-Psi-092999	Pelodiscus sinensis	33.67	4.00e-70	258.00
IUUC-Pma-094304	Petromyzon marinus	35.41	4.00e-45	175.00
IUUC-Pno-095060	Phaeosphaeria nodorum	35.51	2.00e-35	143.00
IUUC-Ppa-095433	Physcomitrella patens	40.27	9.00e-106	376.00
IUUC-Pfo-096433	Poecilia formosa	31.57	2.00e-59	223.00
IUUC-Pab-098677	Pongo abelii	33.13	4.00e-61	228.00
IUUC-Pop-099990	Populus trichocarpa	65.32	2.00e-180	624.00
IUUC-Pca-100444	Procavia capensis	40.25	3.00e-46	179.00
IUUC-Ppe-101318	Prunus persica	62.84	0.00e+00	652.00
IUUC-Pva-102162	Pteropus vampyrus	29.60	3.00e-47	182.00
IUUC-Pgr-103329	Puccinia graminis	28.04	3.00e-55	208.00
IUUC-Ptt-103837	Puccinia triticina	27.64	3.00e-55	209.00
IUUC-Pte-104133	Pyrenophora teres	33.00	2.00e-38	153.00
IUUC-Pyt-104675	Pyrenophora triticirepentis	33.00	4.00e-38	152.00
IUUC-Rno-105004	Rattus norvegicus	33.53	1.00e-62	233.00
IUUC-Sce-106443	Saccharomyces cerevisiae	29.25	2.00e-48	186.00
IUUC-Sha-107199	Sarcophilus harrisii	34.34	2.00e-63	236.00
IUUC-Sja-107670	Schizosaccharomyces japonicus	31.17	5.00e-62	231.00
IUUC-Spo-108125	Schizosaccharomyces pombe	31.10	3.00e-62	231.00
IUUC-Ssl-108534	Sclerotinia sclerotiorum	27.82	4.00e-46	178.00
IUUC-Smo-109588	Selaginella moellendorffii	37.30	1.00e-100	359.00
IUUC-Sit-110043	Setaria italica	49.07	8.00e-106	376.00
IUUC-Stu-112396	Solanum tuberosum	59.93	0.00e+00	632.00
IUUC-Sar-113359	Sorex araneus	31.34	9.00e-36	143.00
IUUC-Sre-114995	Sporisorium reilianum	33.11	3.00e-56	212.00
IUUC-Ssc-115397	Sus scrofa	33.80	9.00e-63	233.00
IUUC-Tgu-116834	Taeniopygia guttata	31.84	3.00e-70	258.00
IUUC-Tru-118764	Takifugu rubripes	33.13	2.00e-70	258.00
IUUC-Tsy-119118	Tarsius syrichta	33.00	2.00e-61	229.00
IUUC-Tni-120053	Tetraodon nigroviridis	31.92	7.00e-69	254.00
IUUC-Tca-121842	Theobroma cacao	62.34	0.00e+00	634.00
IUUC-Tre-122172	Trichoderma reesei	27.80	1.00e-39	157.00
IUUC-Tvi-122288	Trichoderma virens	33.00	1.00e-30	126.00
IUUC-Tae-125722	Triticum aestivum	43.10	4.00e-109	387.00
IUUC-Tur-126846	Triticum urartu	41.69	1.00e-65	242.00
IUUC-Tme-127164	Tuber melanosporum	29.68	5.00e-54	204.00
IUUC-Tbe-127458	Tupaia belangeri	34.58	2.00e-61	229.00
IUUC-Ttr-128680	Tursiops truncatus	33.20	1.00e-58	219.00
IUUC-Uma-129508	Ustilago maydis	32.24	7.00e-56	211.00
IUUC-Vda-129696	Verticillium dahliae	33.22	5.00e-41	161.00
IUUC-Vpa-130820	Vicugna pacos	33.33	6.00e-62	231.00
IUUC-Vvi-131126	Vitis vinifera	60.15	2.00e-177	614.00
IUUC-Xtr-131826	Xenopus tropicalis	32.88	5.00e-73	268.00
IUUC-Xma-133373	Xiphophorus maculatus	31.76	4.00e-62	231.00
IUUC-Yli-134432	Yarrowia lipolytica	29.61	5.00e-42	164.00
IUUC-Zma-135241	Zea mays	48.76	1.00e-111	396.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence