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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-006954
UUCD1 version UUC-ArT-00333
Ensembl Protein ID AT2G47990.1
UniProt Accession O82266; Q8GXN5; SWA1_ARATH
Genbank Protein ID AAC63653.1; AAM15129.1; AEC10921.1; BAC42762.1
Protein Name Protein SLOW WALKER 1; Protein EMBRYO SAC DEVELOPMENT ARREST 13; Protein EMBRYO SAC DEVELOPMENT ARREST 19
Genbank Nucleotide ID AC005309; AC006072; CP002685; AK118137
Gene Name SWA1; EDA13; EDA19; At2g47990; F17A22; T9J23.30
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G47990 AT2G47990.1 AT2G47990.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.20e-21 75.9 176 208
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtc..laf.sdtllvsGsdDgtikvWDl 30
           gH+d v+c  ++  +d +lv+Gs+D+t+kvWD 
   Q: 176  GHKDYVRCgdCSPvNDSMLVTGSYDHTVKVWDA 208
           8*******77776999****************5 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Essential protein required for nuclear division and organization during embryo sac development in female gametophyte, probably by promoting rRNA biogenesis essential for the progression of the mitotic division cycles during gametogenesis (PubMed:15634699, PubMed:15980260). Involved in nucleolar processing of pre-18S ribosomal RNA (PubMed:15980260).
 Essential protein required for nuclear division and organization during embryo sac development in female gametophyte, probably by promoting rRNA biogenesis essential for the progression of the mitotic division cycles during gametogenesis (PubMed:15634699, PubMed:15980260). Involved in nucleolar processing of pre-18S ribosomal RNA (PubMed:15980260).
Protein Sequence
(Fasta)
MEEELRVRLN DHQVSKVFPV KPKSTAKPVS ESETPESRYW SSFKNHSTPN LVSSVAALAF 60
SPVHPHSLAV AHSATVSLFS SQSLSSSRRF SFRDVVSSVC FRSDGALFAA CDLSGVVQVF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006954|E3,WD_repeat|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
CCTAAACCAG CCTCCTTCTC TCTCTCTGTT AGCTGCGTTC TTCTTCAAGC TAGCTCTCTG 60
CTTGTACTCT AGAATAATGG AGGAAGAGCT TCGTGTTCGG CTGAATGACC ATCAAGTGTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006954|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018983--U3_snoRNA-assocProt_15_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF09384--UTP15_C
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus
GO:0007049--P:cell cycle
GO:0051301--P:cell division
GO:0009553--P:embryo sac development
GO:0009561--P:megagametogenesis
GO:0006364--P:rRNA processing
KEGG ath:AT2G47990
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002117 Ailuropoda melanoleuca 32.94 2.00e-62 233.00
IUUC-Atr-003068 Amborella trichopoda 48.07 2.00e-109 389.00
IUUC-Apl-003926 Anas platyrhynchos 33.26 3.00e-66 245.00
IUUC-Aca-004271 Anolis carolinensis 33.20 9.00e-67 246.00
IUUC-Aly-005525 Arabidopsis lyrata 94.34 0.00e+00 937.00
IUUC-Ago-007973 Ashbya gossypii 30.43 3.00e-46 179.00
IUUC-Acl-008287 Aspergillus clavatus 25.36 2.00e-30 126.00
IUUC-Afl-008504 Aspergillus flavus 26.38 3.00e-39 155.00
IUUC-Afu-008983 Aspergillus fumigatus 32.46 4.00e-30 125.00
IUUC-Ani-009315 Aspergillus nidulans 26.67 2.00e-32 133.00
IUUC-Ang-009690 Aspergillus niger 26.57 2.00e-38 152.00
IUUC-Aor-010181 Aspergillus oryzae 26.38 3.00e-39 155.00
IUUC-Ate-010498 Aspergillus terreus 25.85 3.00e-39 156.00
IUUC-Ame-011814 Astyanax mexicanus 34.27 9.00e-64 237.00
IUUC-Bgr-012273 Blumeria graminis 25.00 2.00e-41 162.00
IUUC-Bta-013068 Bos taurus 33.33 3.00e-64 238.00
IUUC-Bci-013930 Botrytis cinerea 26.94 9.00e-45 174.00
IUUC-Bdi-014876 Brachypodium distachyon 43.05 5.00e-120 424.00
IUUC-Bol-015366 Brassica oleracea 83.15 0.00e+00 806.00
IUUC-Bra-017589 Brassica rapa 81.99 0.00e+00 789.00
IUUC-Cel-018159 Caenorhabditis elegans 26.40 1.00e-36 147.00
IUUC-Cja-019139 Callithrix jacchus 33.40 2.00e-64 238.00
IUUC-Cfa-020742 Canis familiaris 32.21 8.00e-61 227.00
IUUC-Cpo-021707 Cavia porcellus 33.40 6.00e-65 241.00
IUUC-Cre-022665 Chlamydomonas reinhardtii 35.09 4.00e-68 251.00
IUUC-Csa-023024 Chlorocebus sabaeus 33.33 5.00e-65 241.00
IUUC-Cho-024487 Choloepus hoffmanni 37.24 4.00e-41 161.00
IUUC-Cin-025294 Ciona intestinalis 30.62 7.00e-65 240.00
IUUC-Cgl-026388 Colletotrichum gloeosporioides 29.35 6.00e-28 118.00
IUUC-Cne-026945 Cryptococcus neoformans 28.29 2.00e-44 173.00
IUUC-Cme-027108 Cyanidioschyzon merolae 27.13 5.00e-41 161.00
IUUC-Dre-028316 Danio rerio 31.90 2.00e-60 226.00
IUUC-Dno-028985 Dasypus novemcinctus 32.02 8.00e-61 227.00
IUUC-Dor-030219 Dipodomys ordii 29.12 1.00e-31 130.00
IUUC-Dse-031495 Dothistroma septosporum 29.06 4.00e-22 99.00
IUUC-Dme-031769 Drosophila melanogaster 27.98 6.00e-47 181.00
IUUC-Ete-032630 Echinops telfairi 38.59 3.00e-46 178.00
IUUC-Eca-033816 Equus caballus 33.79 2.00e-65 242.00
IUUC-Eeu-034840 Erinaceus europaeus 40.28 5.00e-42 164.00
IUUC-Fca-035751 Felis catus 32.81 1.00e-63 236.00
IUUC-Fal-036733 Ficedula albicollis 32.80 5.00e-68 251.00
IUUC-Fox-037743 Fusarium oxysporum 27.68 2.00e-41 163.00
IUUC-Fso-038395 Fusarium solani 26.94 8.00e-39 154.00
IUUC-Gmo-038803 Gadus morhua 32.64 1.00e-61 230.00
IUUC-Ggr-040092 Gaeumannomyces graminis 37.17 7.00e-31 127.00
IUUC-Gga-040714 Gallus gallus 32.04 4.00e-69 254.00
IUUC-Gac-042640 Gasterosteus aculeatus 31.43 3.00e-65 241.00
IUUC-Gma-044192 Glycine max 55.11 4.00e-160 557.00
IUUC-Ggo-045616 Gorilla gorilla 32.53 9.00e-64 236.00
IUUC-Hsa-046720 Homo sapiens 33.47 8.00e-62 230.00
IUUC-Itr-048796 Ictidomys tridecemlineatus 32.61 2.00e-60 225.00
IUUC-Kpa-049291 Komagataella pastoris 30.75 1.00e-49 190.00
IUUC-Lch-049729 Latimeria chalumnae 33.47 8.00e-66 243.00
IUUC-Lpe-051141 Leersia perrieri 43.84 7.00e-119 420.00
IUUC-Loc-051756 Lepisosteus oculatus 33.07 8.00e-70 257.00
IUUC-Lma-053083 Leptosphaeria maculans 29.59 2.00e-33 136.00
IUUC-Laf-054067 Loxodonta africana 34.79 2.00e-64 239.00
IUUC-Mcc-055096 Macaca mulatta 33.33 5.00e-65 241.00
IUUC-Meu-056604 Macropus eugenii 35.57 5.00e-53 201.00
IUUC-Mor-057186 Magnaporthe oryzae 27.31 9.00e-38 150.00
IUUC-Mtr-058346 Medicago truncatula 58.57 1.00e-162 565.00
IUUC-Mla-059116 Melampsora laricipopulina 29.10 1.00e-55 210.00
IUUC-Mga-060038 Meleagris gallopavo 33.94 6.00e-57 213.00
IUUC-Mvi-060272 Microbotryum violaceum 28.12 3.00e-49 189.00
IUUC-Mmr-060877 Microcebus murinus 33.53 1.00e-64 240.00
IUUC-Mdo-062168 Monodelphis domestica 34.32 2.00e-62 232.00
IUUC-Mmu-063441 Mus musculus 33.73 1.00e-65 243.00
IUUC-Mac-065330 Musa acuminata 51.52 3.00e-109 387.00
IUUC-Mpu-065704 Mustela putorius furo 33.20 4.00e-64 238.00
IUUC-Mlu-067640 Myotis lucifugus 33.20 6.00e-64 237.00
IUUC-Nfi-068589 Neosartorya fischeri 32.46 2.00e-30 126.00
IUUC-Ncr-068769 Neurospora crassa 32.42 1.00e-34 140.00
IUUC-Nle-069105 Nomascus leucogenys 34.21 2.00e-62 232.00
IUUC-Opr-070203 Ochotona princeps 33.00 2.00e-65 242.00
IUUC-Ont-072054 Oreochromis niloticus 32.14 6.00e-68 251.00
IUUC-Oan-073624 Ornithorhynchus anatinus 33.26 6.00e-61 227.00
IUUC-Ocu-074326 Oryctolagus cuniculus 33.00 4.00e-62 231.00
IUUC-Obr-076038 Oryza brachyantha 48.77 1.00e-118 419.00
IUUC-Ogl-077463 Oryza glaberrima 44.66 4.00e-113 401.00
IUUC-Ogu-078631 Oryza glumaepatula 44.88 3.00e-119 421.00
IUUC-Oin-079242 Oryza indica 45.06 4.00e-114 404.00
IUUC-Olo-080652 Oryza longistaminata 43.28 2.00e-105 375.00
IUUC-Ome-081109 Oryza meridionalis 46.09 2.00e-106 380.00
IUUC-Oni-082187 Oryza nivara 45.06 4.00e-114 404.00
IUUC-Opu-083995 Oryza punctata 46.52 2.00e-108 385.00
IUUC-Oru-084962 Oryza rufipogon 46.17 2.00e-108 385.00
IUUC-Osa-086201 Oryza sativa 46.17 2.00e-108 385.00
IUUC-Ola-087115 Oryzias latipes 33.12 2.00e-65 242.00
IUUC-Olu-087842 Ostreococcus lucimarinus 32.34 8.00e-58 217.00
IUUC-Oga-088204 Otolemur garnettii 33.53 1.00e-64 240.00
IUUC-Oar-089297 Ovis aries 32.94 2.00e-61 229.00
IUUC-Ptr-090953 Pan troglodytes 33.33 7.00e-64 237.00
IUUC-Pan-092451 Papio anubis 32.53 6.00e-65 241.00
IUUC-Psi-092999 Pelodiscus sinensis 33.59 1.00e-70 260.00
IUUC-Pma-094304 Petromyzon marinus 35.40 3.00e-47 182.00
IUUC-Pno-095060 Phaeosphaeria nodorum 35.05 1.00e-34 140.00
IUUC-Ppa-095433 Physcomitrella patens 39.62 5.00e-105 374.00
IUUC-Pfo-096433 Poecilia formosa 32.16 6.00e-61 227.00
IUUC-Pab-098677 Pongo abelii 33.13 6.00e-64 237.00
IUUC-Pop-099990 Populus trichocarpa 64.59 2.00e-177 614.00
IUUC-Pca-100444 Procavia capensis 39.83 1.00e-46 180.00
IUUC-Ppe-101318 Prunus persica 63.03 0.00e+00 651.00
IUUC-Pva-102162 Pteropus vampyrus 29.09 3.00e-48 185.00
IUUC-Pgr-103329 Puccinia graminis 27.10 2.00e-53 202.00
IUUC-Ptt-103837 Puccinia triticina 28.01 4.00e-53 202.00
IUUC-Pte-104133 Pyrenophora teres 32.46 2.00e-37 149.00
IUUC-Pyt-104675 Pyrenophora triticirepentis 32.46 4.00e-37 149.00
IUUC-Rno-105004 Rattus norvegicus 33.53 2.00e-64 239.00
IUUC-Sce-106443 Saccharomyces cerevisiae 27.78 7.00e-46 177.00
IUUC-Sha-107199 Sarcophilus harrisii 34.06 2.00e-65 242.00
IUUC-Sja-107670 Schizosaccharomyces japonicus 31.19 9.00e-62 230.00
IUUC-Spo-108125 Schizosaccharomyces pombe 29.88 2.00e-61 229.00
IUUC-Ssl-108534 Sclerotinia sclerotiorum 26.94 9.00e-45 174.00
IUUC-Smo-109588 Selaginella moellendorffii 37.98 2.00e-100 358.00
IUUC-Sit-110043 Setaria italica 47.56 4.00e-104 371.00
IUUC-Stu-112396 Solanum tuberosum 60.19 0.00e+00 631.00
IUUC-Sar-113359 Sorex araneus 31.55 1.00e-35 143.00
IUUC-Sre-114995 Sporisorium reilianum 33.48 6.00e-57 214.00
IUUC-Ssc-115397 Sus scrofa 33.60 1.00e-64 239.00
IUUC-Tgu-116834 Taeniopygia guttata 31.38 4.00e-70 258.00
IUUC-Tru-118764 Takifugu rubripes 31.94 4.00e-69 254.00
IUUC-Tsy-119118 Tarsius syrichta 32.61 3.00e-63 235.00
IUUC-Tni-120053 Tetraodon nigroviridis 31.54 2.00e-68 253.00
IUUC-Tca-121842 Theobroma cacao 62.48 0.00e+00 637.00
IUUC-Tre-122172 Trichoderma reesei 34.29 6.00e-39 154.00
IUUC-Tvi-122288 Trichoderma virens 33.00 2.00e-30 126.00
IUUC-Tae-125722 Triticum aestivum 42.27 6.00e-107 380.00
IUUC-Tur-126846 Triticum urartu 40.73 3.00e-64 237.00
IUUC-Tme-127164 Tuber melanosporum 28.83 1.00e-52 200.00
IUUC-Tbe-127458 Tupaia belangeri 34.30 1.00e-62 233.00
IUUC-Ttr-128680 Tursiops truncatus 33.33 3.00e-60 225.00
IUUC-Uma-129508 Ustilago maydis 32.39 4.00e-55 208.00
IUUC-Vda-129696 Verticillium dahliae 31.89 7.00e-38 151.00
IUUC-Vpa-130820 Vicugna pacos 33.66 2.00e-64 239.00
IUUC-Vvi-131126 Vitis vinifera 60.61 6.00e-178 616.00
IUUC-Xtr-131826 Xenopus tropicalis 33.27 5.00e-71 261.00
IUUC-Xma-133373 Xiphophorus maculatus 32.28 2.00e-63 235.00
IUUC-Yli-134432 Yarrowia lipolytica 28.71 8.00e-40 157.00
IUUC-Zma-135241 Zea mays 48.31 4.00e-110 390.00
Created Date 25-Jun-2017

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