iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-013423

Ensembl Protein ID

ENSBTAP00000015764.4

UniProt Accession

A5D9H4; A5D9H4_BOVIN

Genbank Protein ID

ABQ13033.1

Protein Name

Chromatin assembly factor 1 subunit B

Genbank Nucleotide ID

DAAA02003568

Gene Name

CHAF1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000011880.4	ENSBTAT00000015764.4	ENSBTAP00000015764.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-19	67.4	127	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+++++ +d +l++s+s D+t  +WD+++g 
   Q: 127  GHLEDVYDICWaTDgNLMASASVDNTAIMWDVSKGQ 162
           89**********999****************99886 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MKVITCEIAW HNKEPVYSLD FQYGAAGRIH RLASAGVDTA VRVWKVEKGP DGKAIVEFLS 60
NLARHTKAVN VVRFSPNGEI LASGGDDAVI LLWKVNDNKE PEQVAFQDED EAQLNKENWT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCCACCA CCCCCTGAGG AACTGTGTTT CGCTCCTTGA AGACCCCGGA GGATGAAAGT 60
CATCACTTGC GAAATCGCCT GGCACAACAA GGAGCCGGTG TACAGCCTGG ATTTCCAGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029129--CAF1_p60_C
IPR001632--Gprotein_B
IPR002469--Peptidase_S9B_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF15512--CAF-1_p60_C
PF00400--WD40

PRINTS

PR00319--GPROTEINB

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005829--C:cytosol
GO:0000790--C:nuclear chromatin
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0042393--F:histone binding
GO:0006335--P:DNA replication-dependent nucleosome assembly
GO:0006334--P:nucleosome assembly

KEGG

bta:511654

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	38.54	1.00e-79	290.00
IUUC-Aml-001755	Ailuropoda melanoleuca	82.84	0.00e+00	927.00
IUUC-Atr-002674	Amborella trichopoda	35.86	3.00e-86	312.00
IUUC-Apl-003701	Anas platyrhynchos	70.95	0.00e+00	798.00
IUUC-Aca-004692	Anolis carolinensis	71.43	0.00e+00	773.00
IUUC-Aly-006286	Arabidopsis lyrata	39.42	1.00e-84	306.00
IUUC-Ath-007683	Arabidopsis thaliana	39.90	2.00e-84	306.00
IUUC-Ago-007940	Ashbya gossypii	31.42	4.00e-63	235.00
IUUC-Acl-008070	Aspergillus clavatus	43.26	3.00e-43	170.00
IUUC-Afl-008414	Aspergillus flavus	41.59	1.00e-42	167.00
IUUC-Afu-009046	Aspergillus fumigatus	33.18	4.00e-28	119.00
IUUC-Ani-009399	Aspergillus nidulans	44.34	5.00e-43	169.00
IUUC-Ang-009650	Aspergillus niger	39.55	1.00e-40	161.00
IUUC-Aor-009937	Aspergillus oryzae	41.59	1.00e-42	167.00
IUUC-Ate-010505	Aspergillus terreus	31.78	8.00e-28	118.00
IUUC-Ame-011094	Astyanax mexicanus	64.76	0.00e+00	671.00
IUUC-Bgr-012005	Blumeria graminis	39.25	6.00e-38	152.00
IUUC-Bci-013847	Botrytis cinerea	39.34	6.00e-39	155.00
IUUC-Bdi-014860	Brachypodium distachyon	41.46	5.00e-80	291.00
IUUC-Bol-016603	Brassica oleracea	38.32	5.00e-80	291.00
IUUC-Bra-017175	Brassica rapa	34.68	6.00e-78	284.00
IUUC-Cel-018272	Caenorhabditis elegans	33.65	1.00e-53	204.00
IUUC-Cja-019558	Callithrix jacchus	84.91	0.00e+00	924.00
IUUC-Cfa-020900	Canis familiaris	83.88	0.00e+00	931.00
IUUC-Cpo-022054	Cavia porcellus	75.96	0.00e+00	811.00
IUUC-Csa-023850	Chlorocebus sabaeus	84.32	0.00e+00	936.00
IUUC-Cho-024510	Choloepus hoffmanni	84.78	2.00e-145	508.00
IUUC-Cin-025178	Ciona intestinalis	46.55	3.00e-108	385.00
IUUC-Csv-025885	Ciona savignyi	46.26	2.00e-35	140.00
IUUC-Cgl-026572	Colletotrichum gloeosporioides	42.77	4.00e-36	146.00
IUUC-Cne-027015	Cryptococcus neoformans	31.70	1.00e-36	148.00
IUUC-Cme-027136	Cyanidioschyzon merolae	31.13	2.00e-56	213.00
IUUC-Dre-027879	Danio rerio	64.30	0.00e+00	661.00
IUUC-Dno-029335	Dasypus novemcinctus	83.30	0.00e+00	948.00
IUUC-Dor-030520	Dipodomys ordii	64.98	0.00e+00	680.00
IUUC-Dse-031566	Dothistroma septosporum	40.85	2.00e-42	167.00
IUUC-Dme-031838	Drosophila melanogaster	46.40	6.00e-108	385.00
IUUC-Eca-033563	Equus caballus	86.41	0.00e+00	1016.00
IUUC-Fca-036052	Felis catus	80.84	0.00e+00	906.00
IUUC-Fal-037080	Ficedula albicollis	69.74	0.00e+00	781.00
IUUC-Fox-038022	Fusarium oxysporum	40.85	1.00e-40	161.00
IUUC-Fso-038115	Fusarium solani	41.31	1.00e-39	157.00
IUUC-Gmo-039461	Gadus morhua	71.25	1.00e-137	482.00
IUUC-Ggr-040100	Gaeumannomyces graminis	39.81	1.00e-40	161.00
IUUC-Gga-041133	Gallus gallus	71.96	0.00e+00	797.00
IUUC-Gac-041769	Gasterosteus aculeatus	65.10	0.00e+00	664.00
IUUC-Gma-043339	Glycine max	40.49	1.00e-92	333.00
IUUC-Ggo-044561	Gorilla gorilla	84.03	0.00e+00	929.00
IUUC-Hsa-046150	Homo sapiens	84.15	0.00e+00	934.00
IUUC-Hvu-047792	Hordeum vulgare	38.62	1.00e-50	192.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	87.14	0.00e+00	909.00
IUUC-Kpa-049397	Komagataella pastoris	38.18	7.00e-81	293.00
IUUC-Lch-050365	Latimeria chalumnae	53.14	4.00e-144	504.00
IUUC-Lpe-050875	Leersia perrieri	39.02	3.00e-80	292.00
IUUC-Loc-052770	Lepisosteus oculatus	68.03	0.00e+00	684.00
IUUC-Lma-053291	Leptosphaeria maculans	38.68	6.00e-41	162.00
IUUC-Laf-053505	Loxodonta africana	83.13	0.00e+00	970.00
IUUC-Mcc-054803	Macaca mulatta	84.32	0.00e+00	935.00
IUUC-Meu-056578	Macropus eugenii	68.13	0.00e+00	748.00
IUUC-Mor-057211	Magnaporthe oryzae	39.15	6.00e-39	155.00
IUUC-Mpo-057411	Magnaporthe poae	39.34	1.00e-39	158.00
IUUC-Mtr-058066	Medicago truncatula	41.22	2.00e-91	329.00
IUUC-Mga-059735	Meleagris gallopavo	72.15	0.00e+00	802.00
IUUC-Mvi-060288	Microbotryum violaceum	29.85	1.00e-30	128.00
IUUC-Mmr-061343	Microcebus murinus	84.70	0.00e+00	976.00
IUUC-Mdo-062065	Monodelphis domestica	76.71	0.00e+00	868.00
IUUC-Mmu-063501	Mus musculus	82.76	0.00e+00	866.00
IUUC-Mac-064864	Musa acuminata	38.07	1.00e-80	293.00
IUUC-Mpu-066549	Mustela putorius furo	82.40	0.00e+00	909.00
IUUC-Mlu-067121	Myotis lucifugus	76.35	0.00e+00	827.00
IUUC-Nfi-068462	Neosartorya fischeri	43.72	9.00e-44	171.00
IUUC-Ncr-068838	Neurospora crassa	38.32	3.00e-40	160.00
IUUC-Nle-069854	Nomascus leucogenys	84.32	0.00e+00	937.00
IUUC-Opr-070803	Ochotona princeps	75.92	0.00e+00	849.00
IUUC-Ont-071642	Oreochromis niloticus	64.33	0.00e+00	667.00
IUUC-Oan-073675	Ornithorhynchus anatinus	72.41	0.00e+00	821.00
IUUC-Ocu-073863	Oryctolagus cuniculus	90.89	0.00e+00	758.00
IUUC-Oba-075682	Oryza barthii	39.27	1.00e-76	280.00
IUUC-Obr-076039	Oryza brachyantha	40.24	3.00e-82	298.00
IUUC-Ogu-078021	Oryza glumaepatula	40.24	2.00e-81	296.00
IUUC-Oin-079908	Oryza indica	35.32	3.00e-61	229.00
IUUC-Olo-081063	Oryza longistaminata	40.24	1.00e-81	296.00
IUUC-Ome-081930	Oryza meridionalis	40.24	2.00e-81	296.00
IUUC-Oni-082547	Oryza nivara	40.24	2.00e-81	296.00
IUUC-Opu-084089	Oryza punctata	39.76	9.00e-79	288.00
IUUC-Oru-084844	Oryza rufipogon	40.24	2.00e-81	296.00
IUUC-Osa-085582	Oryza sativa	40.24	2.00e-81	296.00
IUUC-Ola-087187	Oryzias latipes	60.10	0.00e+00	669.00
IUUC-Olu-087792	Ostreococcus lucimarinus	38.70	8.00e-75	274.00
IUUC-Oga-088390	Otolemur garnettii	82.38	0.00e+00	949.00
IUUC-Oar-089740	Ovis aries	93.41	0.00e+00	990.00
IUUC-Ptr-091581	Pan troglodytes	84.32	0.00e+00	937.00
IUUC-Pan-092258	Papio anubis	77.15	0.00e+00	842.00
IUUC-Psi-093761	Pelodiscus sinensis	73.06	0.00e+00	834.00
IUUC-Ppa-095428	Physcomitrella patens	40.05	8.00e-91	327.00
IUUC-Pfo-097357	Poecilia formosa	74.94	0.00e+00	669.00
IUUC-Pab-098520	Pongo abelii	84.32	0.00e+00	936.00
IUUC-Pop-099331	Populus trichocarpa	38.59	7.00e-85	307.00
IUUC-Ppe-101548	Prunus persica	38.72	9.00e-85	307.00
IUUC-Pva-103243	Pteropus vampyrus	83.30	0.00e+00	860.00
IUUC-Pgr-103591	Puccinia graminis	33.33	1.00e-35	145.00
IUUC-Pte-104247	Pyrenophora teres	39.62	4.00e-41	163.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	39.62	4.00e-41	163.00
IUUC-Rno-105202	Rattus norvegicus	82.04	0.00e+00	879.00
IUUC-Sce-106250	Saccharomyces cerevisiae	34.72	9.00e-72	264.00
IUUC-Sha-107036	Sarcophilus harrisii	78.27	0.00e+00	891.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	33.80	4.00e-72	265.00
IUUC-Spo-108050	Schizosaccharomyces pombe	32.35	8.00e-70	257.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	37.45	2.00e-39	157.00
IUUC-Sit-109838	Setaria italica	41.55	6.00e-83	301.00
IUUC-Sly-110872	Solanum lycopersicum	37.99	3.00e-81	295.00
IUUC-Stu-111933	Solanum tuberosum	37.53	5.00e-78	285.00
IUUC-Sbi-114587	Sorghum bicolor	40.09	8.00e-84	304.00
IUUC-Ssc-115462	Sus scrofa	87.46	0.00e+00	990.00
IUUC-Tgu-117186	Taeniopygia guttata	69.58	0.00e+00	769.00
IUUC-Tru-118310	Takifugu rubripes	64.38	0.00e+00	681.00
IUUC-Tsy-118927	Tarsius syrichta	77.00	0.00e+00	698.00
IUUC-Tni-120832	Tetraodon nigroviridis	58.56	0.00e+00	659.00
IUUC-Tca-121584	Theobroma cacao	38.65	3.00e-86	312.00
IUUC-Tre-122140	Trichoderma reesei	40.19	6.00e-40	159.00
IUUC-Tvi-122663	Trichoderma virens	41.59	3.00e-40	160.00
IUUC-Tae-124063	Triticum aestivum	38.54	2.00e-79	290.00
IUUC-Tur-126239	Triticum urartu	38.54	5.00e-80	291.00
IUUC-Tme-127108	Tuber melanosporum	40.00	3.00e-80	292.00
IUUC-Ttr-129010	Tursiops truncatus	87.98	0.00e+00	981.00
IUUC-Vda-129825	Verticillium dahliae	42.92	3.00e-41	163.00
IUUC-Vpa-130374	Vicugna pacos	82.35	4.00e-104	372.00
IUUC-Vvi-131136	Vitis vinifera	38.59	4.00e-82	298.00
IUUC-Xtr-132141	Xenopus tropicalis	71.73	0.00e+00	717.00
IUUC-Xma-133980	Xiphophorus maculatus	74.70	0.00e+00	666.00
IUUC-Yli-134457	Yarrowia lipolytica	38.39	8.00e-37	148.00
IUUC-Zma-135321	Zea mays	41.12	7.00e-84	304.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence