iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005998

Ensembl Protein ID

scaffold_701415.1

UniProt Accession

D7MDC3; D7MDC3_ARALL

Genbank Protein ID

EFH43708.1

Protein Name

AT4g28450/F20O9_130

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_913673

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_701415.1	scaffold_701415.1	scaffold_701415.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-27	94.0	107	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH++ v++l   +d + lvs++ D+t+++W++ + +l
   Q: 107  GHQGAVRGLTAsTDgNVLVSCGTDCTVRLWNVPRPTL 143
           8*******9888888****************977665 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKIKTLSRSV DEYTRERSQD LQRVFHNFDP SLRPMEKAVE YQRALTAAKL EKIFARPFVG 60
AMDGHRDGVS CMAKNPNYLK GIFSASMDGD IRLWDISSRR TVCQFPGHQG AVRGLTASTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTTTCGTA GTCGTAAGCA ATGAAGATTA AGACGTTATC AAGATCGGTT GATGAATACA 60
CTCGAGAAAG AAGTCAGGAT CTTCAGGTAA ATTTGTGCAT ATCCAATTCG TTCCCATATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR013979--TIF_beta_prop-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A
PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex

KEGG

aly:ARALYDRAFT_913673

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	45.80	2.00e-126	444.00
IUUC-Atr-002799	Amborella trichopoda	74.78	0.00e+00	725.00
IUUC-Apl-003675	Anas platyrhynchos	45.70	9.00e-122	429.00
IUUC-Aca-004792	Anolis carolinensis	47.79	9.00e-134	469.00
IUUC-Ath-007526	Arabidopsis thaliana	98.01	0.00e+00	933.00
IUUC-Ago-007774	Ashbya gossypii	45.04	2.00e-118	418.00
IUUC-Acl-008024	Aspergillus clavatus	43.64	1.00e-104	372.00
IUUC-Afu-008930	Aspergillus fumigatus	40.76	2.00e-98	352.00
IUUC-Ani-009370	Aspergillus nidulans	42.60	8.00e-103	366.00
IUUC-Ang-009827	Aspergillus niger	43.27	2.00e-103	368.00
IUUC-Aor-010060	Aspergillus oryzae	43.94	4.00e-97	347.00
IUUC-Ate-010434	Aspergillus terreus	45.92	2.00e-90	324.00
IUUC-Ame-011967	Astyanax mexicanus	45.31	1.00e-120	426.00
IUUC-Bgr-011989	Blumeria graminis	43.32	2.00e-101	361.00
IUUC-Bta-013291	Bos taurus	33.77	1.00e-79	289.00
IUUC-Bci-013868	Botrytis cinerea	42.99	6.00e-99	353.00
IUUC-Bdi-014343	Brachypodium distachyon	72.79	0.00e+00	702.00
IUUC-Bol-015740	Brassica oleracea	88.94	0.00e+00	813.00
IUUC-Bra-016689	Brassica rapa	88.72	0.00e+00	804.00
IUUC-Cel-018536	Caenorhabditis elegans	37.71	7.00e-91	327.00
IUUC-Cja-018779	Callithrix jacchus	46.24	7.00e-130	456.00
IUUC-Cfa-020105	Canis familiaris	46.68	3.00e-131	461.00
IUUC-Cpo-021538	Cavia porcellus	46.24	6.00e-126	443.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	67.48	7.00e-64	235.00
IUUC-Csa-023492	Chlorocebus sabaeus	46.46	3.00e-130	457.00
IUUC-Cho-024497	Choloepus hoffmanni	39.69	3.00e-72	265.00
IUUC-Cin-025524	Ciona intestinalis	49.67	2.00e-134	471.00
IUUC-Csv-026197	Ciona savignyi	48.55	1.00e-131	462.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	43.05	7.00e-96	343.00
IUUC-Cne-026840	Cryptococcus neoformans	34.33	3.00e-75	276.00
IUUC-Cme-027111	Cyanidioschyzon merolae	34.66	3.00e-74	271.00
IUUC-Dre-027471	Danio rerio	47.14	8.00e-127	446.00
IUUC-Dno-029790	Dasypus novemcinctus	46.93	8.00e-103	366.00
IUUC-Dor-030971	Dipodomys ordii	36.95	1.00e-91	329.00
IUUC-Dse-031563	Dothistroma septosporum	44.27	4.00e-104	370.00
IUUC-Dme-032161	Drosophila melanogaster	43.02	4.00e-115	407.00
IUUC-Ete-033127	Echinops telfairi	44.49	2.00e-120	425.00
IUUC-Eca-033531	Equus caballus	45.79	5.00e-122	430.00
IUUC-Eeu-034663	Erinaceus europaeus	42.29	3.00e-108	385.00
IUUC-Fca-036258	Felis catus	46.46	2.00e-130	458.00
IUUC-Fal-037456	Ficedula albicollis	46.46	1.00e-124	439.00
IUUC-Fox-038025	Fusarium oxysporum	42.86	1.00e-95	343.00
IUUC-Fso-038344	Fusarium solani	42.34	7.00e-94	337.00
IUUC-Gmo-039643	Gadus morhua	45.59	6.00e-125	439.00
IUUC-Ggr-039816	Gaeumannomyces graminis	42.09	5.00e-93	333.00
IUUC-Gga-040143	Gallus gallus	47.35	2.00e-128	451.00
IUUC-Gac-041665	Gasterosteus aculeatus	46.68	2.00e-130	457.00
IUUC-Gma-043073	Glycine max	77.43	0.00e+00	761.00
IUUC-Ggo-045058	Gorilla gorilla	46.46	4.00e-130	457.00
IUUC-Hsa-046843	Homo sapiens	46.46	2.00e-129	455.00
IUUC-Hvu-047654	Hordeum vulgare	68.06	5.00e-118	416.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	46.02	2.00e-129	454.00
IUUC-Kpa-049232	Komagataella pastoris	44.20	4.00e-122	430.00
IUUC-Lch-050542	Latimeria chalumnae	45.26	8.00e-133	466.00
IUUC-Lpe-051622	Leersia perrieri	74.78	0.00e+00	720.00
IUUC-Loc-052674	Lepisosteus oculatus	46.59	1.00e-134	472.00
IUUC-Lma-053108	Leptosphaeria maculans	43.05	6.00e-101	360.00
IUUC-Laf-053385	Loxodonta africana	46.02	2.00e-126	444.00
IUUC-Mcc-055151	Macaca mulatta	46.46	5.00e-130	456.00
IUUC-Meu-056230	Macropus eugenii	40.93	5.00e-53	201.00
IUUC-Mor-057013	Magnaporthe oryzae	41.36	5.00e-90	324.00
IUUC-Mpo-057530	Magnaporthe poae	42.79	1.00e-93	336.00
IUUC-Mtr-058187	Medicago truncatula	77.88	0.00e+00	751.00
IUUC-Mla-058964	Melampsora laricipopulina	36.10	2.00e-87	315.00
IUUC-Mga-059712	Meleagris gallopavo	46.53	5.00e-120	423.00
IUUC-Mvi-060370	Microbotryum violaceum	40.00	7.00e-71	260.00
IUUC-Mmr-061340	Microcebus murinus	44.25	3.00e-121	428.00
IUUC-Mdo-062978	Monodelphis domestica	46.68	1.00e-130	459.00
IUUC-Mmu-063439	Mus musculus	46.46	1.00e-130	458.00
IUUC-Mac-065129	Musa acuminata	76.33	0.00e+00	754.00
IUUC-Mpu-066548	Mustela putorius furo	41.65	6.00e-95	340.00
IUUC-Mlu-067660	Myotis lucifugus	45.80	4.00e-129	453.00
IUUC-Nfi-068455	Neosartorya fischeri	42.04	1.00e-101	362.00
IUUC-Ncr-068848	Neurospora crassa	39.82	4.00e-95	341.00
IUUC-Nle-069923	Nomascus leucogenys	46.46	2.00e-129	455.00
IUUC-Opr-070279	Ochotona princeps	38.27	2.00e-36	146.00
IUUC-Ont-072234	Oreochromis niloticus	45.98	5.00e-131	460.00
IUUC-Oan-073713	Ornithorhynchus anatinus	40.50	1.00e-45	175.00
IUUC-Ocu-073782	Oryctolagus cuniculus	46.46	1.00e-130	458.00
IUUC-Oba-075161	Oryza barthii	75.00	0.00e+00	724.00
IUUC-Obr-076868	Oryza brachyantha	74.56	0.00e+00	720.00
IUUC-Ogl-077062	Oryza glaberrima	75.00	0.00e+00	724.00
IUUC-Ogu-078308	Oryza glumaepatula	75.00	0.00e+00	723.00
IUUC-Oin-079378	Oryza indica	75.00	0.00e+00	723.00
IUUC-Olo-080638	Oryza longistaminata	72.12	0.00e+00	684.00
IUUC-Oni-082368	Oryza nivara	75.00	0.00e+00	723.00
IUUC-Opu-083628	Oryza punctata	75.00	0.00e+00	723.00
IUUC-Oru-085226	Oryza rufipogon	74.78	0.00e+00	722.00
IUUC-Osa-085368	Oryza sativa	72.62	4.00e-121	426.00
IUUC-Ola-086836	Oryzias latipes	46.24	3.00e-132	464.00
IUUC-Olu-087755	Ostreococcus lucimarinus	53.78	1.00e-146	511.00
IUUC-Oga-088170	Otolemur garnettii	46.24	5.00e-130	456.00
IUUC-Oar-089388	Ovis aries	46.68	1.00e-130	459.00
IUUC-Ptr-090494	Pan troglodytes	46.46	1.00e-129	456.00
IUUC-Pan-091697	Papio anubis	46.46	6.00e-130	457.00
IUUC-Psi-093916	Pelodiscus sinensis	44.69	1.00e-120	425.00
IUUC-Pno-095004	Phaeosphaeria nodorum	41.94	2.00e-95	342.00
IUUC-Ppa-095514	Physcomitrella patens	65.27	0.00e+00	656.00
IUUC-Pfo-097432	Poecilia formosa	48.05	1.00e-130	459.00
IUUC-Pab-098423	Pongo abelii	46.68	1.00e-130	459.00
IUUC-Pop-099649	Populus trichocarpa	82.52	0.00e+00	804.00
IUUC-Pca-100365	Procavia capensis	44.25	3.00e-119	421.00
IUUC-Ppe-101350	Prunus persica	79.06	0.00e+00	760.00
IUUC-Pva-102845	Pteropus vampyrus	46.90	2.00e-128	452.00
IUUC-Pgr-103469	Puccinia graminis	37.91	1.00e-64	240.00
IUUC-Ptt-103980	Puccinia triticina	37.72	2.00e-63	236.00
IUUC-Pte-104111	Pyrenophora teres	43.27	2.00e-97	348.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	43.71	3.00e-98	351.00
IUUC-Rno-105082	Rattus norvegicus	46.24	2.00e-130	458.00
IUUC-Sce-106340	Saccharomyces cerevisiae	44.97	9.00e-116	409.00
IUUC-Sha-106584	Sarcophilus harrisii	46.24	5.00e-130	456.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	44.10	2.00e-101	361.00
IUUC-Spo-108046	Schizosaccharomyces pombe	44.99	2.00e-107	382.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	43.22	2.00e-98	352.00
IUUC-Smo-109548	Selaginella moellendorffii	61.50	3.00e-179	620.00
IUUC-Sit-110242	Setaria italica	72.79	0.00e+00	701.00
IUUC-Sly-111762	Solanum lycopersicum	78.32	0.00e+00	748.00
IUUC-Stu-112156	Solanum tuberosum	78.32	0.00e+00	748.00
IUUC-Sbi-114104	Sorghum bicolor	71.90	0.00e+00	698.00
IUUC-Sre-114951	Sporisorium reilianum	40.32	2.00e-104	372.00
IUUC-Ssc-115510	Sus scrofa	46.46	5.00e-130	456.00
IUUC-Tgu-117234	Taeniopygia guttata	46.24	8.00e-117	412.00
IUUC-Tru-117986	Takifugu rubripes	44.74	5.00e-126	443.00
IUUC-Tsy-119252	Tarsius syrichta	46.21	4.00e-119	421.00
IUUC-Tni-119785	Tetraodon nigroviridis	46.70	1.00e-124	439.00
IUUC-Tca-121222	Theobroma cacao	81.86	0.00e+00	771.00
IUUC-Tre-122243	Trichoderma reesei	40.31	4.00e-96	344.00
IUUC-Tvi-122293	Trichoderma virens	40.93	8.00e-95	340.00
IUUC-Tae-125191	Triticum aestivum	71.24	0.00e+00	681.00
IUUC-Tur-126098	Triticum urartu	67.31	5.00e-178	616.00
IUUC-Tme-127200	Tuber melanosporum	46.80	5.00e-119	420.00
IUUC-Tbe-127568	Tupaia belangeri	42.49	5.00e-55	207.00
IUUC-Ttr-129185	Tursiops truncatus	41.37	2.00e-106	379.00
IUUC-Uma-129353	Ustilago maydis	41.15	3.00e-105	375.00
IUUC-Vda-129768	Verticillium dahliae	41.42	1.00e-89	322.00
IUUC-Vpa-130572	Vicugna pacos	46.46	8.00e-129	453.00
IUUC-Vvi-131555	Vitis vinifera	81.86	0.00e+00	783.00
IUUC-Xtr-132263	Xenopus tropicalis	47.17	5.00e-108	383.00
IUUC-Xma-133925	Xiphophorus maculatus	47.82	2.00e-130	458.00
IUUC-Yli-134384	Yarrowia lipolytica	43.22	8.00e-108	383.00
IUUC-Zma-135616	Zea mays	72.12	0.00e+00	696.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence