iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ztr-136277

Ensembl Protein ID

Mycgr3P73948

UniProt Accession

F9XFP2; F9XFP2_ZYMTI

Genbank Protein ID

EGP85663.1

Protein Name

Ribosome biogenesis protein YTM1

Genbank Nucleotide ID

CM001202

Gene Name

YTM1; MYCGRDRAFT_73948

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Mycgr3G73948	Mycgr3T73948	Mycgr3P73948

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-27	92.1	366	400

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+++++++   s+   ++++sdD t+++WD+r+
   Q: 366  GHTNWIRSISRdpSSsYQFITASDDSTCRIWDIRS 400
           8********889744588**************987 PP

Organism

Zymoseptoria tritici

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MAAQTGARAM QVRIHLKSKD GEIELPEQTG PILVSTELKR YQLSTLVNRL LETERPVPLE 60
FLINGQFLRT SLDEFLTQNG ISAEATLNVE YVKALVPPLH VASYEHDDWI SSVDVLSSTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCAATACG AGACTTGGAA ACATACAATC CACATGGCGG CACAGACTGG AGCAAGGGCC 60
ATGCAGGTCC GGATACACCT CAAATCAAAG GATGGCGAGA TTGAGCTTCC CGAGCAGACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR012972--NLE
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR028599--WDR12/Ytm1

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000790--C:nuclear chromatin
GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0051276--P:chromosome organization
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ztr:MYCGRDRAFT_73948

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000532	Aegilops tauschii	30.92	7.00e-44	169.00
IUUC-Aml-001997	Ailuropoda melanoleuca	28.27	1.00e-32	132.00
IUUC-Atr-002544	Amborella trichopoda	24.95	3.00e-30	124.00
IUUC-Apl-003981	Anas platyrhynchos	27.67	4.00e-32	130.00
IUUC-Aca-004370	Anolis carolinensis	27.08	9.00e-37	145.00
IUUC-Aly-006455	Arabidopsis lyrata	28.17	1.00e-41	162.00
IUUC-Ath-006669	Arabidopsis thaliana	29.54	9.00e-39	152.00
IUUC-Ago-007864	Ashbya gossypii	39.31	8.00e-85	305.00
IUUC-Acl-008177	Aspergillus clavatus	54.55	4.00e-129	452.00
IUUC-Afl-008617	Aspergillus flavus	54.31	4.00e-126	442.00
IUUC-Afu-008752	Aspergillus fumigatus	53.66	3.00e-127	446.00
IUUC-Ani-009136	Aspergillus nidulans	53.59	6.00e-135	472.00
IUUC-Ang-009701	Aspergillus niger	53.81	2.00e-123	434.00
IUUC-Aor-009884	Aspergillus oryzae	54.53	1.00e-126	444.00
IUUC-Ate-010472	Aspergillus terreus	47.22	4.00e-68	249.00
IUUC-Ame-011432	Astyanax mexicanus	27.55	2.00e-35	141.00
IUUC-Bgr-012218	Blumeria graminis	45.27	8.00e-107	378.00
IUUC-Bta-012829	Bos taurus	27.80	3.00e-33	134.00
IUUC-Bci-013953	Botrytis cinerea	46.88	1.00e-118	417.00
IUUC-Bdi-014351	Brachypodium distachyon	30.43	1.00e-36	145.00
IUUC-Bol-016514	Brassica oleracea	29.25	7.00e-39	152.00
IUUC-Bra-016988	Brassica rapa	29.02	1.00e-38	151.00
IUUC-Cel-018569	Caenorhabditis elegans	23.26	4.00e-18	84.00
IUUC-Cja-019468	Callithrix jacchus	28.27	2.00e-32	131.00
IUUC-Cfa-020471	Canis familiaris	27.34	1.00e-31	129.00
IUUC-Cpo-022260	Cavia porcellus	27.10	6.00e-30	123.00
IUUC-Cre-022614	Chlamydomonas reinhardtii	31.85	5.00e-43	166.00
IUUC-Csa-023989	Chlorocebus sabaeus	27.80	7.00e-31	126.00
IUUC-Cho-024426	Choloepus hoffmanni	26.76	3.00e-22	97.40
IUUC-Cin-025789	Ciona intestinalis	23.06	1.00e-22	99.00
IUUC-Cgl-026562	Colletotrichum gloeosporioides	40.53	4.00e-24	102.00
IUUC-Cne-027063	Cryptococcus neoformans	24.95	1.00e-20	92.80
IUUC-Dre-027907	Danio rerio	27.79	2.00e-36	145.00
IUUC-Dno-029225	Dasypus novemcinctus	27.34	3.00e-31	127.00
IUUC-Dor-031082	Dipodomys ordii	28.29	1.00e-13	68.90
IUUC-Dse-031308	Dothistroma septosporum	64.89	3.00e-170	589.00
IUUC-Dme-032189	Drosophila melanogaster	24.07	1.00e-30	125.00
IUUC-Ete-032247	Echinops telfairi	26.10	5.00e-27	113.00
IUUC-Eca-034285	Equus caballus	28.27	6.00e-33	133.00
IUUC-Eeu-035322	Erinaceus europaeus	23.22	1.00e-23	102.00
IUUC-Fca-036114	Felis catus	27.80	3.00e-32	130.00
IUUC-Fal-036891	Ficedula albicollis	26.87	6.00e-26	109.00
IUUC-Fox-037965	Fusarium oxysporum	42.55	9.00e-99	352.00
IUUC-Fso-038244	Fusarium solani	44.11	2.00e-99	354.00
IUUC-Gmo-039040	Gadus morhua	26.41	3.00e-35	140.00
IUUC-Ggr-040093	Gaeumannomyces graminis	40.67	1.00e-79	288.00
IUUC-Gga-040610	Gallus gallus	27.73	1.00e-33	135.00
IUUC-Gac-042117	Gasterosteus aculeatus	27.05	3.00e-36	144.00
IUUC-Gma-043425	Glycine max	30.51	1.00e-43	168.00
IUUC-Ggo-045179	Gorilla gorilla	28.04	2.00e-32	131.00
IUUC-Hsa-046114	Homo sapiens	28.04	1.00e-31	128.00
IUUC-Hvu-047331	Hordeum vulgare	29.72	7.00e-35	139.00
IUUC-Itr-048275	Ictidomys tridecemlineatus	27.34	5.00e-32	129.00
IUUC-Kpa-049304	Komagataella pastoris	39.48	7.00e-92	328.00
IUUC-Lch-050655	Latimeria chalumnae	26.36	3.00e-23	100.00
IUUC-Lpe-051675	Leersia perrieri	29.68	1.00e-41	162.00
IUUC-Loc-052868	Lepisosteus oculatus	26.21	7.00e-36	142.00
IUUC-Lma-053258	Leptosphaeria maculans	44.71	2.00e-112	398.00
IUUC-Laf-053993	Loxodonta africana	27.80	3.00e-33	134.00
IUUC-Mcc-055128	Macaca mulatta	22.10	3.00e-14	70.50
IUUC-Meu-056501	Macropus eugenii	26.93	2.00e-28	117.00
IUUC-Mor-057114	Magnaporthe oryzae	43.31	5.00e-99	352.00
IUUC-Mpo-057463	Magnaporthe poae	45.95	1.00e-38	150.00
IUUC-Mtr-058367	Medicago truncatula	27.08	4.00e-35	140.00
IUUC-Mla-059107	Melampsora laricipopulina	27.99	3.00e-40	157.00
IUUC-Mga-059745	Meleagris gallopavo	27.50	5.00e-34	136.00
IUUC-Mvi-060362	Microbotryum violaceum	27.03	1.00e-34	139.00
IUUC-Mdo-062257	Monodelphis domestica	26.78	1.00e-33	135.00
IUUC-Mmu-063546	Mus musculus	28.04	2.00e-33	134.00
IUUC-Mac-065540	Musa acuminata	29.91	4.00e-40	156.00
IUUC-Mpu-066284	Mustela putorius furo	28.04	3.00e-33	134.00
IUUC-Mlu-067241	Myotis lucifugus	27.80	6.00e-33	133.00
IUUC-Nfi-068260	Neosartorya fischeri	54.74	1.00e-128	451.00
IUUC-Ncr-068719	Neurospora crassa	44.75	2.00e-97	347.00
IUUC-Nle-068981	Nomascus leucogenys	27.80	1.00e-31	128.00
IUUC-Opr-071218	Ochotona princeps	26.50	7.00e-30	122.00
IUUC-Ont-071646	Oreochromis niloticus	26.05	2.00e-31	127.00
IUUC-Oan-073453	Ornithorhynchus anatinus	25.99	4.00e-37	146.00
IUUC-Ocu-074008	Oryctolagus cuniculus	28.27	6.00e-34	136.00
IUUC-Oba-075712	Oryza barthii	26.84	3.00e-30	124.00
IUUC-Obr-076721	Oryza brachyantha	30.11	3.00e-41	160.00
IUUC-Ogl-077229	Oryza glaberrima	30.02	6.00e-43	166.00
IUUC-Ogu-078977	Oryza glumaepatula	26.84	3.00e-30	124.00
IUUC-Oin-079683	Oryza indica	30.02	1.00e-43	168.00
IUUC-Olo-080291	Oryza longistaminata	29.84	3.00e-26	110.00
IUUC-Ome-081834	Oryza meridionalis	29.81	4.00e-42	164.00
IUUC-Oni-082507	Oryza nivara	29.37	6.00e-39	153.00
IUUC-Opu-083396	Oryza punctata	29.59	1.00e-40	159.00
IUUC-Oru-085220	Oryza rufipogon	29.37	4.00e-39	153.00
IUUC-Osa-085767	Oryza sativa	30.02	1.00e-43	168.00
IUUC-Ola-087420	Oryzias latipes	27.51	2.00e-37	147.00
IUUC-Olu-087740	Ostreococcus lucimarinus	26.88	3.00e-26	110.00
IUUC-Oga-088264	Otolemur garnettii	26.03	4.00e-31	127.00
IUUC-Oar-089335	Ovis aries	27.57	4.00e-33	133.00
IUUC-Ptr-091320	Pan troglodytes	28.04	1.00e-31	128.00
IUUC-Pan-092833	Papio anubis	27.80	1.00e-30	125.00
IUUC-Psi-093504	Pelodiscus sinensis	27.32	2.00e-30	125.00
IUUC-Pma-094189	Petromyzon marinus	26.25	2.00e-32	131.00
IUUC-Pno-094929	Phaeosphaeria nodorum	45.59	1.00e-107	381.00
IUUC-Ppa-095429	Physcomitrella patens	30.73	8.00e-49	186.00
IUUC-Pfo-096337	Poecilia formosa	27.32	3.00e-35	140.00
IUUC-Pab-097571	Pongo abelii	27.11	2.00e-31	128.00
IUUC-Pop-099977	Populus trichocarpa	28.51	1.00e-38	151.00
IUUC-Pca-100394	Procavia capensis	25.70	2.00e-26	110.00
IUUC-Ppe-101848	Prunus persica	28.79	3.00e-42	164.00
IUUC-Pva-102921	Pteropus vampyrus	28.78	3.00e-14	70.90
IUUC-Pgr-103637	Puccinia graminis	27.76	3.00e-41	160.00
IUUC-Ptt-103781	Puccinia triticina	27.77	3.00e-42	164.00
IUUC-Pte-104135	Pyrenophora teres	46.92	1.00e-105	376.00
IUUC-Pyt-104609	Pyrenophora triticirepentis	44.54	8.00e-108	382.00
IUUC-Rno-105114	Rattus norvegicus	26.68	1.00e-32	132.00
IUUC-Sce-106401	Saccharomyces cerevisiae	36.84	6.00e-85	306.00
IUUC-Sha-107122	Sarcophilus harrisii	26.86	2.00e-29	121.00
IUUC-Sja-107766	Schizosaccharomyces japonicus	31.44	5.00e-68	249.00
IUUC-Spo-108134	Schizosaccharomyces pombe	34.68	2.00e-75	274.00
IUUC-Ssl-108398	Sclerotinia sclerotiorum	46.24	6.00e-121	425.00
IUUC-Smo-108720	Selaginella moellendorffii	27.23	4.00e-37	146.00
IUUC-Sit-110354	Setaria italica	29.30	8.00e-40	155.00
IUUC-Sly-111023	Solanum lycopersicum	26.88	1.00e-36	145.00
IUUC-Stu-112169	Solanum tuberosum	28.81	7.00e-41	159.00
IUUC-Sbi-114193	Sorghum bicolor	29.57	1.00e-40	158.00
IUUC-Sre-115002	Sporisorium reilianum	30.61	9.00e-23	99.80
IUUC-Ssc-116066	Sus scrofa	27.80	1.00e-32	132.00
IUUC-Tgu-117048	Taeniopygia guttata	27.67	1.00e-31	128.00
IUUC-Tni-119820	Tetraodon nigroviridis	26.21	9.00e-31	125.00
IUUC-Tca-121605	Theobroma cacao	28.76	4.00e-41	160.00
IUUC-Tre-121947	Trichoderma reesei	44.97	2.00e-104	370.00
IUUC-Tvi-122481	Trichoderma virens	45.18	2.00e-105	374.00
IUUC-Tae-123504	Triticum aestivum	30.92	9.00e-44	169.00
IUUC-Tur-126586	Triticum urartu	30.57	4.00e-40	156.00
IUUC-Tme-126900	Tuber melanosporum	40.97	3.00e-91	327.00
IUUC-Ttr-129041	Tursiops truncatus	24.47	1.00e-21	95.50
IUUC-Uma-129628	Ustilago maydis	25.67	1.00e-20	92.80
IUUC-Vpa-130260	Vicugna pacos	27.57	4.00e-33	133.00
IUUC-Vvi-131009	Vitis vinifera	29.70	4.00e-43	166.00
IUUC-Xtr-132083	Xenopus tropicalis	27.79	6.00e-36	142.00
IUUC-Xma-133094	Xiphophorus maculatus	26.33	7.00e-35	139.00
IUUC-Yli-134531	Yarrowia lipolytica	32.77	4.00e-62	230.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence