iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-130014

Ensembl Protein ID

EGY13481

UniProt Accession

G2WRI0; G2WRI0_VERDV

Genbank Protein ID

EGY13481.1

Protein Name

DNA excision repair protein ERCC-8

Genbank Nucleotide ID

DS572695

Gene Name

VDAG_00163

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_00163	EGY13481	EGY13481

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-30	100.9	278	311

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H dsv++l++ +d ++lvs++ D  i+vWD  tg
   Q: 278  HDDSVNGLCWtDDgKYLVSAGLDRRIRVWDAATG 311
           9*********9889****************7776 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MQDRLYARST GDLTPQALAR STTTELLRSF THAPQHRFDG ETDEQGISRT ASIWAHRAGV 60
NALALDKFDG RHLLSGGADG ALRLWDLDHC GNPHERHTFR PIADVPRSAR DSTDGHKHGI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGACC GCCTATATGC CCGTTCAACC GGTGACCTGA CCCCTCAGGC CCTGGCTCGG 60
AGCACCACGA CAGAGCTTCT GCGCAGCTTC ACTCACGCGC CACAACATCG CTTCGATGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

vda:VDAG_00163

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002201	Ailuropoda melanoleuca	36.71	2.00e-55	207.00
IUUC-Atr-002784	Amborella trichopoda	30.39	6.00e-27	113.00
IUUC-Apl-003202	Anas platyrhynchos	37.66	3.00e-55	207.00
IUUC-Aca-004708	Anolis carolinensis	36.36	4.00e-55	206.00
IUUC-Aly-006144	Arabidopsis lyrata	31.51	8.00e-34	136.00
IUUC-Ath-006673	Arabidopsis thaliana	33.51	4.00e-28	117.00
IUUC-Acl-008195	Aspergillus clavatus	35.05	2.00e-65	241.00
IUUC-Afl-008406	Aspergillus flavus	33.18	1.00e-52	198.00
IUUC-Afu-008759	Aspergillus fumigatus	36.89	9.00e-65	239.00
IUUC-Ani-009380	Aspergillus nidulans	35.44	1.00e-63	234.00
IUUC-Ang-009820	Aspergillus niger	36.55	2.00e-53	201.00
IUUC-Aor-010092	Aspergillus oryzae	32.87	3.00e-65	240.00
IUUC-Ate-010491	Aspergillus terreus	35.14	4.00e-63	233.00
IUUC-Bta-012825	Bos taurus	36.05	9.00e-56	208.00
IUUC-Bci-013856	Botrytis cinerea	47.46	2.00e-125	440.00
IUUC-Bdi-014899	Brachypodium distachyon	27.12	4.00e-33	134.00
IUUC-Bol-015337	Brassica oleracea	30.53	1.00e-32	132.00
IUUC-Bra-018089	Brassica rapa	33.51	1.00e-26	112.00
IUUC-Cja-018725	Callithrix jacchus	35.76	2.00e-55	207.00
IUUC-Cfa-021162	Canis familiaris	32.91	1.00e-56	211.00
IUUC-Cpo-022190	Cavia porcellus	33.08	1.00e-57	215.00
IUUC-Cre-022960	Chlamydomonas reinhardtii	35.79	4.00e-25	107.00
IUUC-Csa-023610	Chlorocebus sabaeus	36.05	6.00e-57	213.00
IUUC-Cho-024689	Choloepus hoffmanni	35.42	3.00e-55	206.00
IUUC-Cin-025324	Ciona intestinalis	31.41	5.00e-42	163.00
IUUC-Csv-026059	Ciona savignyi	28.53	3.00e-37	147.00
IUUC-Cgl-026384	Colletotrichum gloeosporioides	65.55	6.00e-163	565.00
IUUC-Cme-027182	Cyanidioschyzon merolae	26.32	1.00e-11	62.80
IUUC-Dre-028696	Danio rerio	37.17	4.00e-60	223.00
IUUC-Dno-029102	Dasypus novemcinctus	36.05	2.00e-56	210.00
IUUC-Dor-030361	Dipodomys ordii	31.91	1.00e-34	139.00
IUUC-Dse-031167	Dothistroma septosporum	39.71	6.00e-85	305.00
IUUC-Ete-032856	Echinops telfairi	34.73	1.00e-23	102.00
IUUC-Eca-033611	Equus caballus	36.09	2.00e-51	194.00
IUUC-Eeu-034583	Erinaceus europaeus	31.61	2.00e-23	101.00
IUUC-Fca-036481	Felis catus	32.41	6.00e-55	206.00
IUUC-Fal-037327	Ficedula albicollis	39.46	2.00e-53	201.00
IUUC-Fox-037684	Fusarium oxysporum	57.29	2.00e-150	523.00
IUUC-Fso-038306	Fusarium solani	61.86	3.00e-172	596.00
IUUC-Gmo-039043	Gadus morhua	38.17	7.00e-58	215.00
IUUC-Ggr-039783	Gaeumannomyces graminis	48.37	1.00e-114	404.00
IUUC-Gga-041085	Gallus gallus	37.97	4.00e-57	213.00
IUUC-Gac-042328	Gasterosteus aculeatus	37.13	2.00e-54	204.00
IUUC-Gma-043004	Glycine max	28.41	3.00e-28	117.00
IUUC-Ggo-045627	Gorilla gorilla	32.39	1.00e-46	178.00
IUUC-Hsa-046028	Homo sapiens	36.05	6.00e-57	213.00
IUUC-Hvu-047678	Hordeum vulgare	27.44	4.00e-12	63.50
IUUC-Itr-048648	Ictidomys tridecemlineatus	32.49	4.00e-57	213.00
IUUC-Kpa-049386	Komagataella pastoris	29.55	2.00e-42	164.00
IUUC-Lch-050590	Latimeria chalumnae	34.50	3.00e-48	183.00
IUUC-Lpe-051725	Leersia perrieri	25.40	3.00e-15	74.30
IUUC-Loc-051788	Lepisosteus oculatus	39.38	1.00e-58	218.00
IUUC-Lma-053082	Leptosphaeria maculans	40.50	2.00e-86	311.00
IUUC-Laf-053809	Loxodonta africana	32.15	1.00e-55	208.00
IUUC-Mcc-054998	Macaca mulatta	35.28	5.00e-52	196.00
IUUC-Meu-055929	Macropus eugenii	37.95	2.00e-49	187.00
IUUC-Mor-057003	Magnaporthe oryzae	49.33	4.00e-122	429.00
IUUC-Mtr-057921	Medicago truncatula	27.55	1.00e-26	112.00
IUUC-Mga-059449	Meleagris gallopavo	30.10	5.00e-31	126.00
IUUC-Mmr-061609	Microcebus murinus	30.96	3.00e-50	190.00
IUUC-Mdo-062564	Monodelphis domestica	37.30	2.00e-55	207.00
IUUC-Mmu-063904	Mus musculus	37.50	8.00e-56	209.00
IUUC-Mac-064716	Musa acuminata	28.71	5.00e-30	123.00
IUUC-Mpu-066617	Mustela putorius furo	32.66	2.00e-55	207.00
IUUC-Mlu-067054	Myotis lucifugus	36.08	2.00e-55	207.00
IUUC-Nfi-068467	Neosartorya fischeri	34.67	3.00e-51	193.00
IUUC-Nle-069731	Nomascus leucogenys	36.05	6.00e-57	213.00
IUUC-Opr-070297	Ochotona princeps	27.75	5.00e-15	73.60
IUUC-Ont-072558	Oreochromis niloticus	37.93	1.00e-52	198.00
IUUC-Ocu-074415	Oryctolagus cuniculus	32.74	3.00e-57	213.00
IUUC-Oba-075759	Oryza barthii	31.44	2.00e-26	112.00
IUUC-Obr-076387	Oryza brachyantha	31.44	3.00e-27	114.00
IUUC-Ogu-078186	Oryza glumaepatula	26.05	1.00e-27	115.00
IUUC-Oin-080183	Oryza indica	25.39	8.00e-16	76.30
IUUC-Ome-081471	Oryza meridionalis	30.65	9.00e-24	102.00
IUUC-Oni-082449	Oryza nivara	30.65	1.00e-23	102.00
IUUC-Opu-083210	Oryza punctata	26.24	4.00e-27	114.00
IUUC-Oru-085159	Oryza rufipogon	31.44	1.00e-26	112.00
IUUC-Osa-085926	Oryza sativa	28.67	5.00e-17	79.00
IUUC-Ola-087084	Oryzias latipes	38.12	5.00e-59	219.00
IUUC-Olu-087853	Ostreococcus lucimarinus	29.86	4.00e-27	113.00
IUUC-Oga-089008	Otolemur garnettii	36.08	2.00e-55	207.00
IUUC-Oar-089259	Ovis aries	36.05	1.00e-55	208.00
IUUC-Ptr-091112	Pan troglodytes	36.05	5.00e-57	213.00
IUUC-Psi-093050	Pelodiscus sinensis	39.50	5.00e-58	216.00
IUUC-Pma-094259	Petromyzon marinus	32.81	1.00e-36	145.00
IUUC-Pno-094798	Phaeosphaeria nodorum	39.13	2.00e-81	294.00
IUUC-Ppa-095477	Physcomitrella patens	28.61	2.00e-33	134.00
IUUC-Pfo-096855	Poecilia formosa	36.02	2.00e-57	214.00
IUUC-Pab-098096	Pongo abelii	36.05	7.00e-57	212.00
IUUC-Pop-098800	Populus trichocarpa	28.73	5.00e-36	143.00
IUUC-Pca-100187	Procavia capensis	38.69	1.00e-31	128.00
IUUC-Ppe-101759	Prunus persica	32.47	5.00e-28	116.00
IUUC-Pva-102438	Pteropus vampyrus	39.74	1.00e-28	119.00
IUUC-Pte-104197	Pyrenophora teres	41.47	3.00e-73	267.00
IUUC-Pyt-104421	Pyrenophora triticirepentis	38.93	3.00e-75	273.00
IUUC-Rno-106087	Rattus norvegicus	35.62	9.00e-54	202.00
IUUC-Sce-106276	Saccharomyces cerevisiae	24.65	2.00e-17	81.60
IUUC-Sha-106831	Sarcophilus harrisii	36.05	3.00e-52	197.00
IUUC-Sja-107681	Schizosaccharomyces japonicus	31.38	2.00e-48	184.00
IUUC-Spo-108294	Schizosaccharomyces pombe	38.10	6.00e-53	199.00
IUUC-Ssl-108613	Sclerotinia sclerotiorum	45.70	7.00e-120	422.00
IUUC-Smo-109008	Selaginella moellendorffii	30.00	2.00e-36	144.00
IUUC-Sit-110300	Setaria italica	27.75	8.00e-27	112.00
IUUC-Sly-111441	Solanum lycopersicum	30.21	5.00e-31	126.00
IUUC-Stu-111995	Solanum tuberosum	29.95	1.00e-30	125.00
IUUC-Sar-113196	Sorex araneus	31.70	3.00e-28	117.00
IUUC-Sbi-113790	Sorghum bicolor	28.53	3.00e-29	120.00
IUUC-Ssc-115609	Sus scrofa	35.74	2.00e-55	207.00
IUUC-Tgu-116927	Taeniopygia guttata	38.92	9.00e-58	215.00
IUUC-Tru-118164	Takifugu rubripes	37.30	5.00e-58	216.00
IUUC-Tsy-119151	Tarsius syrichta	32.29	2.00e-48	184.00
IUUC-Tni-120896	Tetraodon nigroviridis	36.68	3.00e-51	194.00
IUUC-Tca-121592	Theobroma cacao	28.04	9.00e-34	135.00
IUUC-Tre-122023	Trichoderma reesei	60.04	3.00e-161	559.00
IUUC-Tvi-122507	Trichoderma virens	60.99	4.00e-165	572.00
IUUC-Tae-125730	Triticum aestivum	27.62	3.00e-27	114.00
IUUC-Tbe-127422	Tupaia belangeri	32.12	5.00e-22	96.70
IUUC-Ttr-129097	Tursiops truncatus	35.76	2.00e-55	207.00
IUUC-Vpa-130782	Vicugna pacos	36.05	5.00e-56	209.00
IUUC-Vvi-131494	Vitis vinifera	26.76	4.00e-34	137.00
IUUC-Xtr-132165	Xenopus tropicalis	33.79	1.00e-54	204.00
IUUC-Xma-133205	Xiphophorus maculatus	36.41	8.00e-61	225.00
IUUC-Yli-134614	Yarrowia lipolytica	29.19	1.00e-52	198.00
IUUC-Zma-135861	Zea mays	28.57	2.00e-29	121.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence