iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107703

Ensembl Protein ID

EEB08413

UniProt Accession

B6K4K6; B6K4K6_SCHJY

Genbank Protein ID

EEB08413.1

Protein Name

U3 snoRNP-associated protein Sof1

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_03569

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_03569	EEB08413	EEB08413

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-34	112.9	272	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H + vt+++f ++   +v+Gs+D++i+++++r+g+
   Q: 272  HVSAVTSVDFsPTgQEFVTGSYDKSIRIYNVREGH 306
           99*********77799***************9986 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MKIKTITRGT SLTRLNDQDP VKRNLDPSLH PFERGREYVR ALNATKMDRM FAAPFLGQLG 60
QGHQDGVYAL ARDTRVLNRC ASGSGDGVLK LWNMGERSEC WSVKAHDGII RGLAFTLTGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCACTGTC CCTCCCAATC CGCTATAGCA CACTGCAAGC CGCCATGTGT CTAAACTCAC 60
CACCAAAAAC TCAATTAGAG CTAGAATTTC GACGTGTCCA AAGCCAGCAT GAAAATTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR007287--Sof1
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0072686--C:mitotic spindle
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	42.73	6.00e-109	385.00
IUUC-Atr-002799	Amborella trichopoda	46.00	9.00e-113	398.00
IUUC-Apl-003675	Anas platyrhynchos	45.58	8.00e-113	398.00
IUUC-Aca-004792	Anolis carolinensis	43.69	6.00e-113	398.00
IUUC-Aly-005998	Arabidopsis lyrata	44.10	8.00e-109	385.00
IUUC-Ath-007526	Arabidopsis thaliana	43.88	4.00e-107	379.00
IUUC-Ago-007774	Ashbya gossypii	51.52	6.00e-144	501.00
IUUC-Acl-008024	Aspergillus clavatus	53.36	1.00e-143	500.00
IUUC-Afu-008930	Aspergillus fumigatus	51.84	1.00e-140	490.00
IUUC-Ani-009370	Aspergillus nidulans	52.99	2.00e-143	500.00
IUUC-Ang-009827	Aspergillus niger	54.36	2.00e-144	503.00
IUUC-Aor-010060	Aspergillus oryzae	52.03	2.00e-135	473.00
IUUC-Ate-010434	Aspergillus terreus	52.35	3.00e-116	409.00
IUUC-Ame-011967	Astyanax mexicanus	45.37	1.00e-115	407.00
IUUC-Bgr-011989	Blumeria graminis	50.11	1.00e-136	477.00
IUUC-Bta-013291	Bos taurus	33.04	7.00e-72	262.00
IUUC-Bci-013868	Botrytis cinerea	50.34	1.00e-136	477.00
IUUC-Bdi-014343	Brachypodium distachyon	44.32	2.00e-105	374.00
IUUC-Bol-015740	Brassica oleracea	42.54	4.00e-102	362.00
IUUC-Bra-016689	Brassica rapa	42.32	5.00e-102	362.00
IUUC-Cel-018536	Caenorhabditis elegans	37.72	1.00e-80	291.00
IUUC-Cja-018779	Callithrix jacchus	43.18	7.00e-113	398.00
IUUC-Cfa-020105	Canis familiaris	43.85	7.00e-113	398.00
IUUC-Cpo-021538	Cavia porcellus	44.07	1.00e-110	390.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	55.00	3.00e-47	178.00
IUUC-Csa-023492	Chlorocebus sabaeus	43.85	6.00e-114	402.00
IUUC-Cho-024497	Choloepus hoffmanni	39.74	4.00e-66	243.00
IUUC-Cin-025524	Ciona intestinalis	43.97	1.00e-106	378.00
IUUC-Csv-026197	Ciona savignyi	42.83	2.00e-108	383.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	48.88	2.00e-126	443.00
IUUC-Cne-026840	Cryptococcus neoformans	41.50	7.00e-67	247.00
IUUC-Cme-027111	Cyanidioschyzon merolae	35.60	2.00e-75	274.00
IUUC-Dre-027471	Danio rerio	44.24	5.00e-112	395.00
IUUC-Dno-029790	Dasypus novemcinctus	46.33	1.00e-94	337.00
IUUC-Dor-030971	Dipodomys ordii	34.23	1.00e-76	278.00
IUUC-Dse-031563	Dothistroma septosporum	52.13	6.00e-136	475.00
IUUC-Dme-032161	Drosophila melanogaster	41.89	9.00e-107	378.00
IUUC-Ete-033127	Echinops telfairi	41.65	8.00e-102	362.00
IUUC-Eca-033531	Equus caballus	44.47	1.00e-111	394.00
IUUC-Eeu-034663	Erinaceus europaeus	39.20	4.00e-90	323.00
IUUC-Fca-036258	Felis catus	43.85	8.00e-113	398.00
IUUC-Fal-037456	Ficedula albicollis	44.97	2.00e-112	397.00
IUUC-Fox-038025	Fusarium oxysporum	51.46	5.00e-134	468.00
IUUC-Fso-038344	Fusarium solani	50.56	4.00e-122	429.00
IUUC-Gmo-039643	Gadus morhua	42.51	8.00e-110	388.00
IUUC-Ggr-039816	Gaeumannomyces graminis	50.36	1.00e-124	437.00
IUUC-Gga-040143	Gallus gallus	44.27	2.00e-112	397.00
IUUC-Gac-041665	Gasterosteus aculeatus	43.42	2.00e-112	396.00
IUUC-Gma-043073	Glycine max	45.21	2.00e-108	384.00
IUUC-Ggo-045058	Gorilla gorilla	43.62	3.00e-113	400.00
IUUC-Hsa-046843	Homo sapiens	43.40	1.00e-112	398.00
IUUC-Hvu-047654	Hordeum vulgare	44.75	2.00e-67	246.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	43.85	3.00e-113	399.00
IUUC-Kpa-049232	Komagataella pastoris	53.74	2.00e-149	520.00
IUUC-Lch-050542	Latimeria chalumnae	45.05	3.00e-116	409.00
IUUC-Lpe-051622	Leersia perrieri	45.21	6.00e-109	385.00
IUUC-Loc-052674	Lepisosteus oculatus	44.27	8.00e-113	398.00
IUUC-Lma-053108	Leptosphaeria maculans	50.90	1.00e-137	481.00
IUUC-Laf-053385	Loxodonta africana	45.19	2.00e-112	396.00
IUUC-Mcc-055151	Macaca mulatta	43.62	2.00e-113	400.00
IUUC-Meu-056230	Macropus eugenii	40.00	2.00e-47	180.00
IUUC-Mor-057013	Magnaporthe oryzae	49.53	3.00e-122	429.00
IUUC-Mpo-057530	Magnaporthe poae	50.12	1.00e-124	437.00
IUUC-Mtr-058187	Medicago truncatula	44.99	2.00e-107	380.00
IUUC-Mla-058964	Melampsora laricipopulina	36.74	9.00e-91	325.00
IUUC-Mga-059712	Meleagris gallopavo	45.13	6.00e-112	395.00
IUUC-Mvi-060370	Microbotryum violaceum	39.23	8.00e-66	242.00
IUUC-Mmr-061340	Microcebus murinus	42.89	5.00e-107	379.00
IUUC-Mdo-062978	Monodelphis domestica	44.07	8.00e-116	408.00
IUUC-Mmu-063439	Mus musculus	44.97	2.00e-115	406.00
IUUC-Mac-065129	Musa acuminata	44.99	2.00e-114	404.00
IUUC-Mpu-066548	Mustela putorius furo	42.36	3.00e-85	306.00
IUUC-Mlu-067660	Myotis lucifugus	43.62	2.00e-113	400.00
IUUC-Nfi-068455	Neosartorya fischeri	53.85	3.00e-144	502.00
IUUC-Ncr-068848	Neurospora crassa	49.89	2.00e-126	443.00
IUUC-Nle-069923	Nomascus leucogenys	43.62	5.00e-113	399.00
IUUC-Opr-070279	Ochotona princeps	37.36	5.00e-32	129.00
IUUC-Ont-072234	Oreochromis niloticus	44.07	4.00e-116	409.00
IUUC-Oan-073713	Ornithorhynchus anatinus	39.06	1.00e-38	150.00
IUUC-Ocu-073782	Oryctolagus cuniculus	44.30	1.00e-114	404.00
IUUC-Oba-075161	Oryza barthii	44.99	1.00e-109	387.00
IUUC-Obr-076868	Oryza brachyantha	44.99	3.00e-109	386.00
IUUC-Ogl-077062	Oryza glaberrima	44.99	1.00e-109	387.00
IUUC-Ogu-078308	Oryza glumaepatula	44.99	2.00e-109	387.00
IUUC-Oin-079378	Oryza indica	44.99	2.00e-109	387.00
IUUC-Olo-080638	Oryza longistaminata	42.98	6.00e-100	355.00
IUUC-Oni-082368	Oryza nivara	44.99	2.00e-109	387.00
IUUC-Opu-083628	Oryza punctata	44.99	2.00e-109	387.00
IUUC-Oru-085226	Oryza rufipogon	44.77	5.00e-109	385.00
IUUC-Osa-085368	Oryza sativa	40.46	2.00e-51	193.00
IUUC-Ola-086836	Oryzias latipes	44.74	1.00e-118	417.00
IUUC-Olu-087755	Ostreococcus lucimarinus	42.47	1.00e-104	370.00
IUUC-Oga-088170	Otolemur garnettii	43.85	1.00e-113	400.00
IUUC-Oar-089388	Ovis aries	43.62	6.00e-113	399.00
IUUC-Ptr-090494	Pan troglodytes	43.62	1.00e-112	398.00
IUUC-Pan-091697	Papio anubis	43.85	9.00e-114	401.00
IUUC-Psi-093916	Pelodiscus sinensis	43.05	4.00e-110	389.00
IUUC-Pno-095004	Phaeosphaeria nodorum	49.10	6.00e-130	455.00
IUUC-Ppa-095514	Physcomitrella patens	46.89	9.00e-119	418.00
IUUC-Pfo-097432	Poecilia formosa	43.36	2.00e-109	387.00
IUUC-Pab-098423	Pongo abelii	43.85	1.00e-113	400.00
IUUC-Pop-099649	Populus trichocarpa	45.43	3.00e-116	409.00
IUUC-Pca-100365	Procavia capensis	43.62	1.00e-106	378.00
IUUC-Ppe-101350	Prunus persica	43.90	1.00e-112	397.00
IUUC-Pva-102845	Pteropus vampyrus	44.27	2.00e-113	401.00
IUUC-Pgr-103469	Puccinia graminis	31.95	2.00e-72	264.00
IUUC-Ptt-103980	Puccinia triticina	34.52	1.00e-62	232.00
IUUC-Pte-104111	Pyrenophora teres	51.12	6.00e-130	455.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	51.12	7.00e-129	451.00
IUUC-Rno-105082	Rattus norvegicus	44.74	8.00e-115	404.00
IUUC-Sce-106340	Saccharomyces cerevisiae	53.19	2.00e-146	510.00
IUUC-Sha-106584	Sarcophilus harrisii	44.07	5.00e-116	409.00
IUUC-Spo-108046	Schizosaccharomyces pombe	78.44	0.00e+00	718.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	51.14	1.00e-137	480.00
IUUC-Smo-109548	Selaginella moellendorffii	47.44	9.00e-122	428.00
IUUC-Sit-110242	Setaria italica	44.32	7.00e-108	382.00
IUUC-Sly-111762	Solanum lycopersicum	44.54	1.00e-106	377.00
IUUC-Stu-112156	Solanum tuberosum	45.21	3.00e-108	383.00
IUUC-Sbi-114104	Sorghum bicolor	43.88	4.00e-107	379.00
IUUC-Sre-114951	Sporisorium reilianum	41.52	3.00e-110	389.00
IUUC-Ssc-115510	Sus scrofa	43.40	1.00e-111	394.00
IUUC-Tgu-117234	Taeniopygia guttata	46.34	4.00e-113	399.00
IUUC-Tru-117986	Takifugu rubripes	43.93	1.00e-112	397.00
IUUC-Tsy-119252	Tarsius syrichta	42.42	7.00e-102	362.00
IUUC-Tni-119785	Tetraodon nigroviridis	44.34	5.00e-107	379.00
IUUC-Tca-121222	Theobroma cacao	45.21	1.00e-111	394.00
IUUC-Tre-122243	Trichoderma reesei	52.58	6.00e-135	471.00
IUUC-Tvi-122293	Trichoderma virens	51.69	2.00e-133	467.00
IUUC-Tae-125191	Triticum aestivum	43.43	5.00e-102	362.00
IUUC-Tur-126098	Triticum urartu	41.99	1.00e-92	331.00
IUUC-Tme-127200	Tuber melanosporum	58.56	2.00e-157	546.00
IUUC-Tbe-127568	Tupaia belangeri	41.15	6.00e-53	199.00
IUUC-Ttr-129185	Tursiops truncatus	38.26	2.00e-91	328.00
IUUC-Uma-129353	Ustilago maydis	41.72	7.00e-111	392.00
IUUC-Vda-129768	Verticillium dahliae	52.23	9.00e-134	468.00
IUUC-Vpa-130572	Vicugna pacos	43.40	2.00e-111	394.00
IUUC-Vvi-131555	Vitis vinifera	44.99	1.00e-111	394.00
IUUC-Xtr-132263	Xenopus tropicalis	44.51	2.00e-97	347.00
IUUC-Xma-133925	Xiphophorus maculatus	43.82	5.00e-110	389.00
IUUC-Yli-134384	Yarrowia lipolytica	53.06	1.00e-137	481.00
IUUC-Zma-135616	Zea mays	43.88	2.00e-105	374.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence