iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018567

Ensembl Protein ID

C09G9.2a

UniProt Accession

Q17872; Q17872_CAEEL

Genbank Protein ID

CAA90972.2

Protein Name

Nuclear Pore complex Protein

Genbank Nucleotide ID

BX284604

Gene Name

npp-23; C09G9.2; CELE_C09G9.2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00007493	C09G9.2a	C09G9.2a

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DWD	29.71	6.00e-08	56.20	IUUC-Hsa-045956

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MAVVTITTDT EDSEIPQRTE VGSSTPLVDE IMQHADVKLS KILFTGETSS QIISLGKGRG 60
RCISLWERDD GIDPFKVLAT KNSEIDPNDA CTMTDNRVCI GYADGSLAVF STDKDDLALM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAATTATTA AAATGGCCGT CGTAACAATC ACTACGGATA CAGAAGATTC GGAAATTCCC 60
CAAAGAACCG AAGTTGGAAG TTCCACTCCG CTCGTCGATG AAATTATGCA GCATGCCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1

SMART

SM00320--WD40

Gene Ontology

GO:0031080--C:nuclear pore outer ring

KEGG

cel:CELE_C09G9.2

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	29.20	4.00e-10	57.80
IUUC-Apl-003533	Anas platyrhynchos	29.93	3.00e-10	57.80
IUUC-Aca-004965	Anolis carolinensis	24.01	8.00e-12	63.20
IUUC-Ame-011694	Astyanax mexicanus	26.42	7.00e-10	56.60
IUUC-Cfa-021112	Canis familiaris	30.43	5.00e-10	57.40
IUUC-Csa-023460	Chlorocebus sabaeus	29.20	4.00e-10	57.80
IUUC-Cho-024279	Choloepus hoffmanni	29.20	3.00e-10	57.80
IUUC-Cin-025360	Ciona intestinalis	24.04	3.00e-08	51.20
IUUC-Csv-026301	Ciona savignyi	25.00	2.00e-10	58.50
IUUC-Cne-027032	Cryptococcus neoformans	28.76	1.00e-05	42.70
IUUC-Dre-028097	Danio rerio	22.67	2.00e-10	58.90
IUUC-Dno-029131	Dasypus novemcinctus	27.12	8.00e-10	56.60
IUUC-Dme-031834	Drosophila melanogaster	25.84	5.00e-13	67.40
IUUC-Ete-032448	Echinops telfairi	24.52	7.00e-10	57.00
IUUC-Eca-034409	Equus caballus	30.43	4.00e-10	57.80
IUUC-Fca-036177	Felis catus	29.20	5.00e-10	57.40
IUUC-Fal-037657	Ficedula albicollis	29.93	2.00e-09	55.10
IUUC-Gmo-038946	Gadus morhua	27.19	2.00e-10	58.90
IUUC-Gac-042442	Gasterosteus aculeatus	22.18	6.00e-12	63.90
IUUC-Ggo-045223	Gorilla gorilla	30.43	4.00e-10	57.80
IUUC-Hsa-045956	Homo sapiens	29.71	1.00e-09	56.20
IUUC-Itr-048116	Ictidomys tridecemlineatus	29.05	2.00e-10	58.90
IUUC-Lch-050035	Latimeria chalumnae	26.95	1.00e-09	56.20
IUUC-Laf-053404	Loxodonta africana	30.30	1.00e-09	56.20
IUUC-Mcc-055813	Macaca mulatta	29.20	4.00e-10	57.80
IUUC-Mga-060193	Meleagris gallopavo	24.78	4.00e-10	57.80
IUUC-Mmr-060818	Microcebus murinus	28.09	3.00e-10	58.20
IUUC-Mdo-062822	Monodelphis domestica	28.47	1.00e-09	55.80
IUUC-Mmu-064182	Mus musculus	24.90	1.00e-09	56.20
IUUC-Mpu-066865	Mustela putorius furo	29.20	6.00e-10	57.00
IUUC-Mlu-067329	Myotis lucifugus	29.20	5.00e-10	57.40
IUUC-Ncr-068709	Neurospora crassa	26.88	3.00e-06	44.30
IUUC-Nle-069093	Nomascus leucogenys	30.43	4.00e-10	57.80
IUUC-Opr-070481	Ochotona princeps	30.22	5.00e-10	57.80
IUUC-Ont-072445	Oreochromis niloticus	23.84	4.00e-11	60.80
IUUC-Oan-073029	Ornithorhynchus anatinus	29.20	3.00e-10	58.20
IUUC-Ocu-074275	Oryctolagus cuniculus	30.43	4.00e-10	57.80
IUUC-Oga-088952	Otolemur garnettii	27.12	3.00e-10	58.20
IUUC-Oar-089300	Ovis aries	29.41	1.00e-09	56.20
IUUC-Ptr-091389	Pan troglodytes	28.47	1.00e-09	56.60
IUUC-Pan-092008	Papio anubis	31.88	8.00e-12	63.50
IUUC-Psi-093326	Pelodiscus sinensis	24.88	6.00e-10	57.00
IUUC-Pfo-096331	Poecilia formosa	24.65	7.00e-11	60.10
IUUC-Pab-098306	Pongo abelii	29.71	2.00e-09	55.80
IUUC-Pop-100064	Populus trichocarpa	25.62	1.00e-06	47.00
IUUC-Pva-102578	Pteropus vampyrus	31.88	6.00e-10	57.40
IUUC-Sha-107640	Sarcophilus harrisii	29.05	9.00e-11	59.70
IUUC-Sly-111495	Solanum lycopersicum	30.86	2.00e-08	52.40
IUUC-Sar-113681	Sorex araneus	33.64	2.00e-09	55.80
IUUC-Ssc-116129	Sus scrofa	28.68	1.00e-09	56.20
IUUC-Tsy-119331	Tarsius syrichta	30.43	4.00e-10	57.80
IUUC-Tvi-122387	Trichoderma virens	26.59	8.00e-09	53.10
IUUC-Ttr-128461	Tursiops truncatus	30.43	8.00e-10	57.00
IUUC-Vpa-130162	Vicugna pacos	30.43	5.00e-10	57.80
IUUC-Xtr-132446	Xenopus tropicalis	26.54	9.00e-11	59.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence