iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-49	163.2	518	555
UBD/Beta-Prp	1.70e-77	260.6	476	629

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gHt +v++++f   d +++++s D+t+++W+++ + ++
   Q: 518  GHTRGVWSVRFspVDQIVLTSSSDCTLRIWSISNFSCI 555
           8**********9655999*************9888876 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
           +h++ ++cv+++p+++l+at+s+d+t kvw +++ +l   l gh+ +v++v+fsp ++i +t+s+D t+++w++s+++c+  +  +e ++l  +f   
   Q: 476  SHDKEVNCVAYAPNNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSISNFSCIKRFD-QECTILRAEFLDH 572
           68889999************************999999999**************999**********************9999.9999999999999 PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvr 162
           g++++s+ +d  +++w+++t++cl+  l++h++ v+ ++v+  + + + +G++D+++ 
   Q: 573  GKFIISAASDGLLKLWNIKTNTCLQ-SLDEHNDRVWALAVSARSnRFFYTGGADSKLI 629
           9***********************9.99999999999999999988899999998764 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MLAGISEKSY AAEARYTNFY AGGDIAWSPN GHHLYCLNGS AVNQVDVQTS QILNSYGLSS 60
PSADNKRPAE LDNIDVEEDT ITCFGLSQEH LVTAHRSGLL RLWQLDTGKL VKLWKAQHKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAGTTCCGT TCATGTTCTG ATCCGCGGCG CACGCGGTTT TTGTATTTAT AAACAACGAA 60
AATCATGCTG GCGGGTATCA GCGAGAAAAG GTAACATAAA CTTAATAATT ACCTGATGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0009267--P:cellular response to starvation
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0022008--P:neurogenesis

KEGG

dme:Dmel_CG1671

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	28.10	9.00e-79	287.00
IUUC-Aml-002376	Ailuropoda melanoleuca	32.76	4.00e-117	414.00
IUUC-Atr-002486	Amborella trichopoda	29.66	1.00e-92	333.00
IUUC-Apl-003519	Anas platyrhynchos	33.92	4.00e-104	371.00
IUUC-Aca-004363	Anolis carolinensis	30.99	2.00e-54	205.00
IUUC-Aly-006152	Arabidopsis lyrata	28.89	1.00e-87	317.00
IUUC-Ath-006966	Arabidopsis thaliana	29.01	2.00e-87	316.00
IUUC-Ago-007746	Ashbya gossypii	25.27	5.00e-66	245.00
IUUC-Acl-008009	Aspergillus clavatus	22.79	4.00e-56	212.00
IUUC-Afl-008681	Aspergillus flavus	22.14	2.00e-44	173.00
IUUC-Afu-008798	Aspergillus fumigatus	24.00	4.00e-49	189.00
IUUC-Ani-009278	Aspergillus nidulans	22.95	1.00e-57	217.00
IUUC-Ang-009640	Aspergillus niger	23.16	5.00e-58	218.00
IUUC-Aor-010160	Aspergillus oryzae	22.24	2.00e-43	170.00
IUUC-Ate-010320	Aspergillus terreus	22.74	5.00e-54	205.00
IUUC-Ame-010930	Astyanax mexicanus	30.19	2.00e-22	97.80
IUUC-Bgr-012054	Blumeria graminis	25.21	5.00e-59	222.00
IUUC-Bta-012611	Bos taurus	32.14	3.00e-111	395.00
IUUC-Bci-013797	Botrytis cinerea	24.47	8.00e-57	214.00
IUUC-Bdi-014384	Brachypodium distachyon	29.31	1.00e-94	340.00
IUUC-Bol-015097	Brassica oleracea	29.64	1.00e-85	310.00
IUUC-Bra-017798	Brassica rapa	30.13	2.00e-87	316.00
IUUC-Cel-018664	Caenorhabditis elegans	28.75	5.00e-96	344.00
IUUC-Cja-019092	Callithrix jacchus	31.73	1.00e-116	413.00
IUUC-Cfa-021040	Canis familiaris	31.77	2.00e-112	399.00
IUUC-Cpo-022529	Cavia porcellus	32.31	4.00e-111	394.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	46.67	2.00e-36	143.00
IUUC-Csa-024205	Chlorocebus sabaeus	31.98	3.00e-118	418.00
IUUC-Cin-025560	Ciona intestinalis	29.66	5.00e-107	381.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	26.17	9.00e-64	238.00
IUUC-Cne-027082	Cryptococcus neoformans	25.41	3.00e-64	239.00
IUUC-Cme-027159	Cyanidioschyzon merolae	22.63	6.00e-27	115.00
IUUC-Dre-028138	Danio rerio	31.46	3.00e-107	382.00
IUUC-Dno-029914	Dasypus novemcinctus	29.81	9.00e-76	277.00
IUUC-Dor-030685	Dipodomys ordii	31.54	3.00e-68	252.00
IUUC-Dse-031429	Dothistroma septosporum	25.06	5.00e-56	212.00
IUUC-Ete-033086	Echinops telfairi	37.62	1.00e-70	260.00
IUUC-Eca-034354	Equus caballus	32.84	9.00e-111	393.00
IUUC-Eeu-034832	Erinaceus europaeus	33.84	5.00e-73	268.00
IUUC-Fca-036136	Felis catus	31.75	8.00e-110	390.00
IUUC-Fal-036859	Ficedula albicollis	32.64	3.00e-113	402.00
IUUC-Fox-037863	Fusarium oxysporum	24.96	3.00e-57	216.00
IUUC-Fso-038389	Fusarium solani	24.79	1.00e-59	223.00
IUUC-Gmo-038711	Gadus morhua	29.45	5.00e-94	338.00
IUUC-Ggr-039820	Gaeumannomyces graminis	24.73	4.00e-56	212.00
IUUC-Gga-040263	Gallus gallus	32.52	3.00e-115	408.00
IUUC-Gac-041291	Gasterosteus aculeatus	33.05	4.00e-119	421.00
IUUC-Gma-044026	Glycine max	29.50	2.00e-95	343.00
IUUC-Ggo-044693	Gorilla gorilla	31.68	7.00e-116	410.00
IUUC-Hsa-046048	Homo sapiens	31.81	3.00e-116	412.00
IUUC-Hvu-047608	Hordeum vulgare	29.73	2.00e-95	342.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	32.60	4.00e-120	424.00
IUUC-Kpa-049209	Komagataella pastoris	27.30	3.00e-79	288.00
IUUC-Lch-050085	Latimeria chalumnae	31.15	3.00e-110	391.00
IUUC-Lpe-050945	Leersia perrieri	30.31	5.00e-91	328.00
IUUC-Loc-052679	Lepisosteus oculatus	33.09	4.00e-121	428.00
IUUC-Laf-053685	Loxodonta africana	32.10	7.00e-108	384.00
IUUC-Mcc-055861	Macaca mulatta	32.05	1.00e-115	409.00
IUUC-Meu-056820	Macropus eugenii	29.15	2.00e-75	276.00
IUUC-Mor-057234	Magnaporthe oryzae	23.67	8.00e-57	214.00
IUUC-Mpo-057456	Magnaporthe poae	24.19	1.00e-43	170.00
IUUC-Mtr-058122	Medicago truncatula	29.04	4.00e-92	332.00
IUUC-Mla-058980	Melampsora laricipopulina	28.50	5.00e-55	208.00
IUUC-Mga-060080	Meleagris gallopavo	32.56	6.00e-114	404.00
IUUC-Mvi-060338	Microbotryum violaceum	29.11	2.00e-87	316.00
IUUC-Mmr-060762	Microcebus murinus	31.57	1.00e-113	403.00
IUUC-Mdo-061975	Monodelphis domestica	32.80	5.00e-111	394.00
IUUC-Mmu-064038	Mus musculus	31.58	3.00e-110	392.00
IUUC-Mac-065189	Musa acuminata	33.06	4.00e-74	272.00
IUUC-Mpu-066526	Mustela putorius furo	32.80	2.00e-112	399.00
IUUC-Mlu-067716	Myotis lucifugus	32.47	2.00e-122	432.00
IUUC-Nfi-068474	Neosartorya fischeri	24.50	5.00e-50	192.00
IUUC-Ncr-068826	Neurospora crassa	25.11	2.00e-52	200.00
IUUC-Nle-069832	Nomascus leucogenys	32.10	6.00e-118	417.00
IUUC-Opr-071183	Ochotona princeps	32.99	9.00e-111	393.00
IUUC-Ont-072371	Oreochromis niloticus	33.17	1.00e-116	413.00
IUUC-Oan-073491	Ornithorhynchus anatinus	30.81	4.00e-98	351.00
IUUC-Oba-075963	Oryza barthii	30.25	2.00e-93	336.00
IUUC-Obr-076173	Oryza brachyantha	29.64	2.00e-92	332.00
IUUC-Ogl-077692	Oryza glaberrima	30.12	3.00e-92	332.00
IUUC-Ogu-078965	Oryza glumaepatula	30.25	2.00e-93	336.00
IUUC-Oin-079708	Oryza indica	30.38	3.00e-94	339.00
IUUC-Olo-080679	Oryza longistaminata	30.51	2.00e-93	336.00
IUUC-Oni-082960	Oryza nivara	30.38	3.00e-94	338.00
IUUC-Opu-083282	Oryza punctata	29.99	2.00e-89	323.00
IUUC-Oru-085224	Oryza rufipogon	30.25	1.00e-93	337.00
IUUC-Osa-085320	Oryza sativa	30.25	1.00e-93	337.00
IUUC-Ola-086370	Oryzias latipes	30.20	6.00e-44	171.00
IUUC-Olu-087814	Ostreococcus lucimarinus	26.54	3.00e-62	233.00
IUUC-Oga-088458	Otolemur garnettii	32.02	4.00e-120	424.00
IUUC-Oar-090032	Ovis aries	30.39	6.00e-80	291.00
IUUC-Ptr-090749	Pan troglodytes	31.93	6.00e-117	414.00
IUUC-Pan-091691	Papio anubis	30.94	9.00e-109	387.00
IUUC-Psi-093200	Pelodiscus sinensis	31.88	5.00e-114	404.00
IUUC-Pma-094165	Petromyzon marinus	33.53	4.00e-66	245.00
IUUC-Pno-095048	Phaeosphaeria nodorum	24.55	8.00e-51	194.00
IUUC-Ppa-095336	Physcomitrella patens	29.41	1.00e-88	320.00
IUUC-Pfo-096132	Poecilia formosa	33.74	2.00e-116	412.00
IUUC-Pab-097855	Pongo abelii	31.85	5.00e-118	417.00
IUUC-Pop-099858	Populus trichocarpa	30.07	2.00e-94	339.00
IUUC-Pca-100232	Procavia capensis	38.87	4.00e-40	159.00
IUUC-Ppe-101665	Prunus persica	30.50	2.00e-98	353.00
IUUC-Pva-102178	Pteropus vampyrus	32.39	3.00e-115	408.00
IUUC-Pgr-103288	Puccinia graminis	27.43	9.00e-64	238.00
IUUC-Ptt-103808	Puccinia triticina	27.20	2.00e-63	236.00
IUUC-Pte-104205	Pyrenophora teres	25.36	3.00e-64	239.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	25.00	2.00e-59	223.00
IUUC-Rno-105617	Rattus norvegicus	31.95	2.00e-112	399.00
IUUC-Sce-106281	Saccharomyces cerevisiae	24.77	2.00e-66	246.00
IUUC-Sha-107378	Sarcophilus harrisii	32.72	2.00e-110	392.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	29.88	1.00e-74	273.00
IUUC-Spo-108361	Schizosaccharomyces pombe	27.26	1.00e-69	256.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	25.33	9.00e-63	234.00
IUUC-Smo-109257	Selaginella moellendorffii	29.33	2.00e-95	342.00
IUUC-Sit-110258	Setaria italica	30.90	9.00e-94	337.00
IUUC-Sly-111521	Solanum lycopersicum	28.37	7.00e-95	341.00
IUUC-Stu-112718	Solanum tuberosum	39.69	8.00e-25	105.00
IUUC-Sar-113586	Sorex araneus	33.82	1.00e-12	67.00
IUUC-Sbi-114768	Sorghum bicolor	30.90	1.00e-97	350.00
IUUC-Sre-115159	Sporisorium reilianum	26.59	5.00e-56	212.00
IUUC-Ssc-116342	Sus scrofa	26.05	3.00e-59	222.00
IUUC-Tgu-117320	Taeniopygia guttata	32.56	6.00e-110	390.00
IUUC-Tru-118024	Takifugu rubripes	33.94	1.00e-123	436.00
IUUC-Tni-119971	Tetraodon nigroviridis	34.11	2.00e-119	422.00
IUUC-Tca-121248	Theobroma cacao	30.14	2.00e-97	349.00
IUUC-Tre-122079	Trichoderma reesei	26.22	1.00e-59	224.00
IUUC-Tvi-122554	Trichoderma virens	27.08	8.00e-62	231.00
IUUC-Tae-125845	Triticum aestivum	29.76	1.00e-95	343.00
IUUC-Tur-126436	Triticum urartu	28.16	3.00e-70	258.00
IUUC-Tme-126942	Tuber melanosporum	26.50	1.00e-60	227.00
IUUC-Tbe-128000	Tupaia belangeri	34.52	2.00e-20	93.60
IUUC-Ttr-128964	Tursiops truncatus	32.43	3.00e-118	418.00
IUUC-Uma-129473	Ustilago maydis	25.18	3.00e-56	213.00
IUUC-Vda-129749	Verticillium dahliae	25.88	4.00e-63	235.00
IUUC-Vvi-131511	Vitis vinifera	28.55	3.00e-89	322.00
IUUC-Xtr-132816	Xenopus tropicalis	28.62	2.00e-84	306.00
IUUC-Xma-133672	Xiphophorus maculatus	33.58	3.00e-119	422.00
IUUC-Yli-134602	Yarrowia lipolytica	27.12	2.00e-78	286.00
IUUC-Zma-135559	Zea mays	29.57	2.00e-92	332.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence