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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108293
UUCD1 version UUC-ScP-00148
Ensembl Protein ID SPBC16A3.05c.1:pep
UniProt Accession P41838; RAE1_SCHPO
Genbank Protein ID AAA86311.1; CAA16856.1
Protein Name Poly(A)+ RNA export protein
Genbank Nucleotide ID U14951; CU329671
Gene Name rae1; SPBC16A3.05c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPBC16A3.05c SPBC16A3.05c.1 SPBC16A3.05c.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.30e-28 93.3 114 152
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.....sdtllvsGsdDgtikvWDlrtgvl 35
           H d v+c++f     ++++l++Gs+D+t+k WDlr+ ++
   Q: 114  HDDAVRCVRFveamgTSPILATGSWDKTLKYWDLRQSTP 152
           99************7559****************98766 PP
   
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Required for mitotic cell growth as well as for spore germination. Functions in cell cycle progression through trafficking of proteins required for mitosis. Has a role in the mRNA export process.
 Required for mitotic cell growth as well as for spore germination. Functions in cell cycle progression through trafficking of proteins required for mitosis. Has a role in the mRNA export process.
Protein Sequence
(Fasta)
MSLFGQATTS TVSNATGDLK KDVEVAQPPE DSISDLAFSP QAEYLAASSW DSKVRIYEVQ 60
ATGQSIGKAL YEHQGPVLSV NWSRDGTKVA SGSVDKSAKV FDIQTGQNQQ VAAHDDAVRC 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108293|E3,WD_repeat|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAGTAATTTA CCAACTACCA CAACTATTAG AATGTCACTT TTTGGACAGG CTACAACATC 60
TACAGTATCT AATGCAACCG GTGACTTAAA AAAGGATGTG GAGGTTTGTT AATTTTACAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108293|E3,WD_repeat|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0005635--C:nuclear envelope
GO:0005643--C:nuclear pore
GO:0016973--P:poly(A)+ mRNA export from nucleus
GO:0006606--P:protein import into nucleus
GO:0000054--P:ribosomal subunit export from nucleus
KEGG spo:SPBC16A3.05c
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000081 Aegilops tauschii 47.83 3.00e-81 293.00
IUUC-Aml-002179 Ailuropoda melanoleuca 48.39 7.00e-87 311.00
IUUC-Atr-002609 Amborella trichopoda 48.63 7.00e-89 318.00
IUUC-Apl-003637 Anas platyrhynchos 48.97 1.00e-88 317.00
IUUC-Aca-005042 Anolis carolinensis 49.27 9.00e-89 318.00
IUUC-Aly-006015 Arabidopsis lyrata 45.79 1.00e-88 317.00
IUUC-Ath-007659 Arabidopsis thaliana 46.07 3.00e-88 316.00
IUUC-Ago-008004 Ashbya gossypii 52.63 8.00e-110 387.00
IUUC-Acl-008030 Aspergillus clavatus 60.53 2.00e-123 433.00
IUUC-Afl-008636 Aspergillus flavus 59.94 7.00e-124 434.00
IUUC-Afu-009121 Aspergillus fumigatus 58.10 2.00e-124 436.00
IUUC-Ani-009238 Aspergillus nidulans 58.19 1.00e-122 430.00
IUUC-Ang-009801 Aspergillus niger 60.73 3.00e-130 456.00
IUUC-Aor-009974 Aspergillus oryzae 59.94 7.00e-124 434.00
IUUC-Ate-010406 Aspergillus terreus 57.82 2.00e-122 429.00
IUUC-Ame-011368 Astyanax mexicanus 46.63 7.00e-86 308.00
IUUC-Bgr-012233 Blumeria graminis 57.83 2.00e-120 422.00
IUUC-Bta-012856 Bos taurus 48.39 7.00e-87 311.00
IUUC-Bci-013964 Botrytis cinerea 56.80 2.00e-115 406.00
IUUC-Bdi-014049 Brachypodium distachyon 47.31 8.00e-89 318.00
IUUC-Bol-015367 Brassica oleracea 46.05 3.00e-86 309.00
IUUC-Bra-016903 Brassica rapa 46.05 3.00e-86 309.00
IUUC-Cel-018563 Caenorhabditis elegans 37.61 7.00e-63 232.00
IUUC-Cja-019700 Callithrix jacchus 48.09 9.00e-87 311.00
IUUC-Cfa-020337 Canis familiaris 48.09 7.00e-87 311.00
IUUC-Cpo-021858 Cavia porcellus 47.80 2.00e-86 310.00
IUUC-Cre-022748 Chlamydomonas reinhardtii 44.41 4.00e-83 299.00
IUUC-Csa-023322 Chlorocebus sabaeus 48.09 7.00e-87 311.00
IUUC-Cin-025393 Ciona intestinalis 42.70 1.00e-82 297.00
IUUC-Csv-026093 Ciona savignyi 42.11 1.00e-82 298.00
IUUC-Cgl-026503 Colletotrichum gloeosporioides 48.86 4.00e-92 328.00
IUUC-Cne-026774 Cryptococcus neoformans 47.09 2.00e-85 307.00
IUUC-Cme-027243 Cyanidioschyzon merolae 36.58 3.00e-62 230.00
IUUC-Dre-028159 Danio rerio 47.80 4.00e-87 312.00
IUUC-Dno-028852 Dasypus novemcinctus 48.09 7.00e-87 311.00
IUUC-Dor-030445 Dipodomys ordii 40.47 1.00e-60 224.00
IUUC-Dse-031161 Dothistroma septosporum 54.97 4.00e-110 389.00
IUUC-Dme-032009 Drosophila melanogaster 46.11 2.00e-82 296.00
IUUC-Eca-033306 Equus caballus 47.80 2.00e-86 310.00
IUUC-Fca-035579 Felis catus 48.09 7.00e-87 311.00
IUUC-Fal-037582 Ficedula albicollis 49.56 2.00e-89 320.00
IUUC-Fox-037772 Fusarium oxysporum 57.52 8.00e-116 407.00
IUUC-Fso-038368 Fusarium solani 57.83 3.00e-120 422.00
IUUC-Gmo-038500 Gadus morhua 47.51 9.00e-86 308.00
IUUC-Ggr-040019 Gaeumannomyces graminis 59.60 9.00e-126 441.00
IUUC-Gga-040684 Gallus gallus 49.56 4.00e-89 319.00
IUUC-Gac-042592 Gasterosteus aculeatus 46.92 2.00e-85 307.00
IUUC-Gma-043683 Glycine max 47.75 7.00e-92 328.00
IUUC-Ggo-044965 Gorilla gorilla 48.09 1.00e-86 310.00
IUUC-Hsa-046779 Homo sapiens 48.40 6.00e-81 292.00
IUUC-Hvu-047380 Hordeum vulgare 46.65 6.00e-79 285.00
IUUC-Itr-048819 Ictidomys tridecemlineatus 48.39 3.00e-87 313.00
IUUC-Kpa-049284 Komagataella pastoris 55.49 1.00e-116 410.00
IUUC-Lch-050559 Latimeria chalumnae 42.74 4.00e-75 272.00
IUUC-Lpe-051050 Leersia perrieri 48.04 5.00e-86 308.00
IUUC-Loc-052874 Lepisosteus oculatus 47.51 3.00e-88 316.00
IUUC-Lma-053085 Leptosphaeria maculans 54.44 3.00e-109 386.00
IUUC-Laf-053980 Loxodonta africana 48.09 8.00e-87 311.00
IUUC-Mcc-055408 Macaca mulatta 48.09 1.00e-86 311.00
IUUC-Meu-056551 Macropus eugenii 44.71 1.00e-75 274.00
IUUC-Mor-057248 Magnaporthe oryzae 59.26 2.00e-126 443.00
IUUC-Mpo-057390 Magnaporthe poae 59.54 2.00e-125 439.00
IUUC-Mtr-057675 Medicago truncatula 46.91 9.00e-90 321.00
IUUC-Mla-059155 Melampsora laricipopulina 49.25 6.00e-106 375.00
IUUC-Mga-060140 Meleagris gallopavo 48.85 7.00e-79 285.00
IUUC-Mvi-060311 Microbotryum violaceum 51.27 1.00e-102 363.00
IUUC-Mmr-061533 Microcebus murinus 48.09 1.00e-86 311.00
IUUC-Mdo-062593 Monodelphis domestica 48.68 4.00e-87 312.00
IUUC-Mmu-063362 Mus musculus 47.80 2.00e-86 310.00
IUUC-Mac-064968 Musa acuminata 45.07 2.00e-79 286.00
IUUC-Mpu-065722 Mustela putorius furo 48.09 1.00e-86 311.00
IUUC-Mlu-068124 Myotis lucifugus 48.09 8.00e-87 311.00
IUUC-Nfi-068595 Neosartorya fischeri 57.82 1.00e-123 434.00
IUUC-Ncr-068790 Neurospora crassa 60.11 2.00e-124 436.00
IUUC-Nle-069395 Nomascus leucogenys 39.59 8.00e-61 225.00
IUUC-Opr-070320 Ochotona princeps 42.52 9.00e-73 265.00
IUUC-Ont-071303 Oreochromis niloticus 47.51 1.00e-86 310.00
IUUC-Oan-073724 Ornithorhynchus anatinus 48.97 8.00e-88 315.00
IUUC-Ocu-074961 Oryctolagus cuniculus 47.76 2.00e-80 290.00
IUUC-Oba-075250 Oryza barthii 45.92 2.00e-86 310.00
IUUC-Obr-076326 Oryza brachyantha 48.34 1.00e-86 310.00
IUUC-Ogl-077767 Oryza glaberrima 48.04 5.00e-86 308.00
IUUC-Ogu-078760 Oryza glumaepatula 45.92 2.00e-86 310.00
IUUC-Oin-080219 Oryza indica 48.04 5.00e-86 308.00
IUUC-Olo-081007 Oryza longistaminata 48.04 5.00e-86 308.00
IUUC-Ome-081848 Oryza meridionalis 43.18 1.00e-82 298.00
IUUC-Oni-082576 Oryza nivara 45.92 2.00e-86 310.00
IUUC-Opu-083511 Oryza punctata 44.17 5.00e-81 292.00
IUUC-Oru-084270 Oryza rufipogon 45.92 2.00e-86 310.00
IUUC-Osa-085707 Oryza sativa 45.92 2.00e-86 310.00
IUUC-Ola-087292 Oryzias latipes 48.09 6.00e-88 315.00
IUUC-Olu-087689 Ostreococcus lucimarinus 49.86 1.00e-100 357.00
IUUC-Oga-088821 Otolemur garnettii 48.09 7.00e-87 311.00
IUUC-Oar-090253 Ovis aries 48.09 7.00e-87 311.00
IUUC-Ptr-091097 Pan troglodytes 47.51 9.00e-86 308.00
IUUC-Pan-091835 Papio anubis 48.09 9.00e-87 311.00
IUUC-Psi-093000 Pelodiscus sinensis 49.56 3.00e-89 319.00
IUUC-Pma-094273 Petromyzon marinus 47.54 1.00e-88 317.00
IUUC-Pno-094920 Phaeosphaeria nodorum 53.65 6.00e-105 371.00
IUUC-Ppa-095202 Physcomitrella patens 49.06 2.00e-71 259.00
IUUC-Pfo-096388 Poecilia formosa 45.68 1.00e-87 314.00
IUUC-Pab-097533 Pongo abelii 48.09 9.00e-87 311.00
IUUC-Pop-099348 Populus trichocarpa 46.91 3.00e-82 296.00
IUUC-Ppe-101817 Prunus persica 48.50 2.00e-90 323.00
IUUC-Pva-102233 Pteropus vampyrus 48.09 2.00e-87 313.00
IUUC-Pgr-103342 Puccinia graminis 52.99 2.00e-108 383.00
IUUC-Ptt-103836 Puccinia triticina 53.01 3.00e-109 386.00
IUUC-Pte-104387 Pyrenophora teres 53.33 6.00e-110 388.00
IUUC-Pyt-104737 Pyrenophora triticirepentis 53.48 1.00e-112 397.00
IUUC-Rno-105548 Rattus norvegicus 47.51 3.00e-86 309.00
IUUC-Sce-106379 Saccharomyces cerevisiae 51.09 3.00e-105 372.00
IUUC-Sha-107617 Sarcophilus harrisii 48.57 2.00e-61 226.00
IUUC-Sja-107668 Schizosaccharomyces japonicus 79.50 8.00e-160 554.00
IUUC-Smo-109611 Selaginella moellendorffii 47.43 1.00e-93 334.00
IUUC-Sit-110436 Setaria italica 47.01 4.00e-89 319.00
IUUC-Sly-111037 Solanum lycopersicum 48.60 2.00e-93 333.00
IUUC-Stu-112371 Solanum tuberosum 38.24 2.00e-57 213.00
IUUC-Sbi-114361 Sorghum bicolor 45.30 5.00e-87 311.00
IUUC-Sre-114922 Sporisorium reilianum 39.58 4.00e-69 253.00
IUUC-Ssc-116305 Sus scrofa 48.09 8.00e-87 311.00
IUUC-Tgu-116751 Taeniopygia guttata 49.56 1.00e-89 320.00
IUUC-Tru-117798 Takifugu rubripes 46.33 3.00e-85 306.00
IUUC-Tsy-119523 Tarsius syrichta 49.10 7.00e-74 268.00
IUUC-Tni-120477 Tetraodon nigroviridis 46.36 7.00e-85 305.00
IUUC-Tca-121802 Theobroma cacao 46.07 3.00e-88 316.00
IUUC-Tre-121994 Trichoderma reesei 57.67 7.00e-114 401.00
IUUC-Tvi-122631 Trichoderma virens 57.14 2.00e-111 393.00
IUUC-Tae-125687 Triticum aestivum 46.33 5.00e-91 325.00
IUUC-Tur-126390 Triticum urartu 46.41 4.00e-89 319.00
IUUC-Tme-127152 Tuber melanosporum 63.96 5.00e-126 441.00
IUUC-Tbe-127319 Tupaia belangeri 39.27 2.00e-43 167.00
IUUC-Ttr-129207 Tursiops truncatus 47.94 1.00e-85 307.00
IUUC-Uma-129342 Ustilago maydis 39.31 4.00e-63 233.00
IUUC-Vda-129865 Verticillium dahliae 55.56 2.00e-117 413.00
IUUC-Vpa-130076 Vicugna pacos 42.76 3.00e-63 233.00
IUUC-Vvi-131104 Vitis vinifera 47.84 1.00e-89 320.00
IUUC-Xtr-132917 Xenopus tropicalis 39.14 2.00e-60 223.00
IUUC-Xma-133615 Xiphophorus maculatus 47.21 7.00e-87 311.00
IUUC-Yli-134431 Yarrowia lipolytica 55.08 7.00e-119 418.00
IUUC-Zma-135142 Zea mays 45.03 2.00e-86 310.00
Created Date 25-Jun-2017

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