iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022837

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496116

Gene Name

CHLREDRAFT_205525

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_205525	EDP05939	EDP05939

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-51	169.0	355	391
E3 activity/RING/U-box	3.20e-32	110.0	58	130
UBD/Beta-Prp	3.40e-82	275.5	154	373

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           gH d v+ la  d+++ sGs+D ti+vWDl t  ++k
   Q: 355  GHDDNVRVLAVGDRHMYSGSWDRTIRVWDLATLECVK 391
           8*********9569*****************999986 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
            p+ f CpIs+elM+dPv++++G+tydr++Iekwl++g++tcPvt+ +l++ +l+Pn++lr  iq+w  ++++
   Q: 58   APSSFYCPISMELMHDPVMVATGHTYDRQCIEKWLNQGNRTCPVTGMRLRHLELTPNYALRTAIQEWATTHGV 130
           699******************************************************************9986 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg 106
           +gh++ v+  v +   ++ l+++s+d+ti+vwd+++  + + +++h+ +v ++++ +    l +gs D+tikvwdl t + ++tl+gh+d v++l++    
   Q: 154  QGHEEIVWA-VEV--CGRRLFSASADKTIRVWDIESRRCEQVMEDHTRPVLSLSIANG--KLFSGSYDYTIKVWDLATLQKIQTLSGHTDAVRALAVAG-- 247
           333333333.444..5555566666666666666666665555666666666666655..356666666666666666666666666666666666555.. PP
   S: 107  dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklw 207
            +l sGs d+t+rvwd +t qcl  +l+gh+g v+++v     n ++sGs+Drtv++Wd +t ++  tltg h ++v+ l  +s+   + sgs+d+t+k+w
   Q: 248  GRLFSGSYDSTVRVWDENTLQCLD-VLKGHNGPVRTLVHCR--NQMFSGSYDRTVKVWDCNTLECKATLTG-HGGAVRALVASSD--KVFSGSDDTTIKVW 342
           566666666666666666666665.6666666665555444..5555666666666666666666666655.6666666655553..45666666666666 PP
   S: 208  dlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlg 283
           d +t +c++tl gh+dnv+++++                                              d+++++g
   Q: 343  DAKTLKCMKTLLGHDDNVRVLAVG---------------------------------------------DRHMYSG 373
           666666666666666666655555.............................................4444444 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MKQFLRGLRG AADAREAGGG QDGAQEVVGG PSEPSRAAPT PSTSSAPAAA EDPGKPQAPS 60
SFYCPISMEL MHDPVMVATG HTYDRQCIEK WLNQGNRTCP VTGMRLRHLE LTPNYALRTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACAAGGCG CCGTATTGCA TAGTGCACTA CTGGTTGCAG GTAGATTCAG AGCAGTTCCT 60
CAGGAAGTCT TCAACGTTCG CCAGCGCGAA ACGTTCCTCT TGTTCGTAGC GGGACTGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013321--Arc_rbn_hlx_hlx
IPR020472--G-protein_beta_WD-40_rep
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

cre:CHLREDRAFT_205525

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000439	Aegilops tauschii	51.19	5.00e-23	100.00
IUUC-Aml-002406	Ailuropoda melanoleuca	37.54	3.00e-53	201.00
IUUC-Apl-003176	Anas platyrhynchos	36.50	6.00e-57	213.00
IUUC-Aca-004529	Anolis carolinensis	35.24	2.00e-53	202.00
IUUC-Ago-007794	Ashbya gossypii	33.45	1.00e-37	149.00
IUUC-Acl-008250	Aspergillus clavatus	36.56	6.00e-40	157.00
IUUC-Afl-008413	Aspergillus flavus	35.46	1.00e-39	157.00
IUUC-Ang-009529	Aspergillus niger	35.56	7.00e-40	157.00
IUUC-Ame-010898	Astyanax mexicanus	35.56	2.00e-53	201.00
IUUC-Bta-012391	Bos taurus	37.42	2.00e-53	201.00
IUUC-Cel-018392	Caenorhabditis elegans	37.08	4.00e-41	160.00
IUUC-Cja-018902	Callithrix jacchus	37.54	2.00e-53	201.00
IUUC-Cfa-020237	Canis familiaris	37.54	2.00e-53	202.00
IUUC-Cpo-022234	Cavia porcellus	37.42	3.00e-53	201.00
IUUC-Csa-023532	Chlorocebus sabaeus	37.54	2.00e-53	201.00
IUUC-Cho-025026	Choloepus hoffmanni	39.75	2.00e-47	181.00
IUUC-Cin-025279	Ciona intestinalis	42.05	3.00e-50	191.00
IUUC-Csv-026312	Ciona savignyi	37.46	3.00e-50	191.00
IUUC-Cgl-026707	Colletotrichum gloeosporioides	37.94	1.00e-43	170.00
IUUC-Cne-026975	Cryptococcus neoformans	33.05	3.00e-37	148.00
IUUC-Cme-027168	Cyanidioschyzon merolae	28.53	3.00e-24	105.00
IUUC-Dre-028303	Danio rerio	35.85	2.00e-53	202.00
IUUC-Dno-029576	Dasypus novemcinctus	34.88	3.00e-48	185.00
IUUC-Dor-030196	Dipodomys ordii	37.21	9.00e-53	199.00
IUUC-Dse-031358	Dothistroma septosporum	36.88	5.00e-42	164.00
IUUC-Dme-031702	Drosophila melanogaster	37.18	4.00e-49	188.00
IUUC-Ete-032791	Echinops telfairi	37.54	3.00e-53	201.00
IUUC-Eca-033424	Equus caballus	37.42	2.00e-53	201.00
IUUC-Eeu-034996	Erinaceus europaeus	37.00	7.00e-53	200.00
IUUC-Fca-036422	Felis catus	37.54	2.00e-53	202.00
IUUC-Fal-037478	Ficedula albicollis	36.20	1.00e-56	212.00
IUUC-Fox-037701	Fusarium oxysporum	37.59	7.00e-43	167.00
IUUC-Gmo-038779	Gadus morhua	41.84	4.00e-47	181.00
IUUC-Ggr-040085	Gaeumannomyces graminis	36.52	1.00e-40	160.00
IUUC-Gga-040170	Gallus gallus	36.50	4.00e-57	214.00
IUUC-Gac-042233	Gasterosteus aculeatus	35.98	3.00e-49	188.00
IUUC-Ggo-044422	Gorilla gorilla	37.54	2.00e-53	202.00
IUUC-Hsa-045898	Homo sapiens	37.54	2.00e-53	202.00
IUUC-Hvu-047824	Hordeum vulgare	37.85	7.00e-29	119.00
IUUC-Itr-048241	Ictidomys tridecemlineatus	37.42	4.00e-53	200.00
IUUC-Kpa-049097	Komagataella pastoris	32.08	1.00e-35	143.00
IUUC-Lch-050414	Latimeria chalumnae	37.09	4.00e-53	201.00
IUUC-Loc-052348	Lepisosteus oculatus	37.29	2.00e-53	201.00
IUUC-Lma-053123	Leptosphaeria maculans	35.46	7.00e-40	157.00
IUUC-Laf-054054	Loxodonta africana	37.54	2.00e-53	202.00
IUUC-Mcc-055056	Macaca mulatta	37.54	2.00e-53	201.00
IUUC-Meu-056313	Macropus eugenii	32.38	2.00e-42	164.00
IUUC-Mor-057133	Magnaporthe oryzae	35.82	1.00e-39	157.00
IUUC-Mpo-057542	Magnaporthe poae	36.52	8.00e-41	160.00
IUUC-Mga-060171	Meleagris gallopavo	36.50	5.00e-57	213.00
IUUC-Mmr-061292	Microcebus murinus	37.54	2.00e-53	202.00
IUUC-Mdo-062304	Monodelphis domestica	37.42	3.00e-53	201.00
IUUC-Mmu-063610	Mus musculus	37.54	1.00e-53	202.00
IUUC-Mpu-065931	Mustela putorius furo	37.54	2.00e-53	202.00
IUUC-Mlu-066976	Myotis lucifugus	37.54	2.00e-53	202.00
IUUC-Nfi-068570	Neosartorya fischeri	36.17	1.00e-40	160.00
IUUC-Ncr-068778	Neurospora crassa	36.52	3.00e-42	165.00
IUUC-Nle-070174	Nomascus leucogenys	37.54	2.00e-53	201.00
IUUC-Opr-070927	Ochotona princeps	40.70	6.00e-47	180.00
IUUC-Ont-071997	Oreochromis niloticus	36.75	2.00e-52	198.00
IUUC-Oan-072936	Ornithorhynchus anatinus	37.42	2.00e-53	202.00
IUUC-Ocu-074742	Oryctolagus cuniculus	37.54	2.00e-53	202.00
IUUC-Obr-076806	Oryza brachyantha	29.62	5.00e-32	131.00
IUUC-Oin-079809	Oryza indica	29.77	9.00e-33	134.00
IUUC-Ola-087098	Oryzias latipes	37.42	3.00e-53	201.00
IUUC-Olu-087837	Ostreococcus lucimarinus	53.80	1.00e-81	294.00
IUUC-Oga-088884	Otolemur garnettii	37.54	5.00e-53	199.00
IUUC-Oar-090220	Ovis aries	36.93	1.00e-51	196.00
IUUC-Ptr-090492	Pan troglodytes	37.54	2.00e-53	202.00
IUUC-Pan-091770	Papio anubis	37.54	2.00e-53	201.00
IUUC-Psi-093207	Pelodiscus sinensis	37.42	2.00e-53	201.00
IUUC-Pma-094749	Petromyzon marinus	37.27	3.00e-57	214.00
IUUC-Pno-095026	Phaeosphaeria nodorum	36.17	3.00e-40	158.00
IUUC-Pfo-096493	Poecilia formosa	37.42	3.00e-53	201.00
IUUC-Pab-098141	Pongo abelii	37.42	2.00e-53	201.00
IUUC-Pca-100375	Procavia capensis	37.33	2.00e-45	175.00
IUUC-Pva-102988	Pteropus vampyrus	37.54	2.00e-53	202.00
IUUC-Pgr-103331	Puccinia graminis	32.68	6.00e-33	133.00
IUUC-Ptt-103853	Puccinia triticina	31.01	2.00e-35	141.00
IUUC-Pte-104253	Pyrenophora teres	36.17	6.00e-41	161.00
IUUC-Pyt-104635	Pyrenophora triticirepentis	36.88	7.00e-42	164.00
IUUC-Rno-105706	Rattus norvegicus	37.54	2.00e-53	201.00
IUUC-Sce-106343	Saccharomyces cerevisiae	32.32	4.00e-37	147.00
IUUC-Sha-107653	Sarcophilus harrisii	37.54	2.00e-53	201.00
IUUC-Sja-107945	Schizosaccharomyces japonicus	31.11	4.00e-44	170.00
IUUC-Spo-108115	Schizosaccharomyces pombe	38.71	7.00e-50	189.00
IUUC-Sar-113600	Sorex araneus	33.89	3.00e-40	158.00
IUUC-Sre-114901	Sporisorium reilianum	34.38	7.00e-38	151.00
IUUC-Ssc-115990	Sus scrofa	41.05	5.00e-47	180.00
IUUC-Tgu-117510	Taeniopygia guttata	37.54	2.00e-53	202.00
IUUC-Tru-117819	Takifugu rubripes	37.42	3.00e-53	201.00
IUUC-Tsy-118828	Tarsius syrichta	37.54	2.00e-53	201.00
IUUC-Tni-120468	Tetraodon nigroviridis	37.09	7.00e-53	199.00
IUUC-Tur-126080	Triticum urartu	27.76	4.00e-26	111.00
IUUC-Tbe-127925	Tupaia belangeri	37.42	2.00e-53	201.00
IUUC-Ttr-128899	Tursiops truncatus	37.42	2.00e-53	202.00
IUUC-Uma-129449	Ustilago maydis	34.82	2.00e-38	152.00
IUUC-Vda-129936	Verticillium dahliae	37.59	4.00e-41	161.00
IUUC-Vpa-130082	Vicugna pacos	38.06	4.00e-48	184.00
IUUC-Xtr-132213	Xenopus tropicalis	37.54	1.00e-53	202.00
IUUC-Xma-133646	Xiphophorus maculatus	38.65	7.00e-54	203.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence