iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002607

Ensembl Protein ID

ERN18729

UniProt Accession

U5D8D0; U5D8D0_AMBTC

Genbank Protein ID

ERN18729.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392079

Gene Name

AMTR_s00199p00025780

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00199p00025780	ERN18729	ERN18729

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-20	71.5	35	70

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           +++++l+f  +  +lv++sdD +i+++D+  g+llk
   Q: 35   GKISSLDFhRTaSYLVTASDDESIRLYDIANGTLLK 70
           789******7778***************99999887 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MPGGQVERDE RISIELTDEV MQSMEVGMIF RDYNGKISSL DFHRTASYLV TASDDESIRL 60
YDIANGTLLK TINSKKYGVD LVCFTPHPTT VIYSSKNGWD ESLRLLSLHD NKYLRYFKGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAGGTT AATTGAGATC AACTTTAGGC CTTTATTTTC TTCTCTCTTT CTACACTTCG 60
ATTGTTTTCT GAGTTTTTTT TCTTTTTTCT TTTTGGGGTT TTAGGTGGGC AGGTAGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0009827--P:plant-type cell wall modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	68.90	3.00e-138	483.00
IUUC-Aml-001221	Ailuropoda melanoleuca	40.38	6.00e-68	249.00
IUUC-Apl-003817	Anas platyrhynchos	40.66	2.00e-65	242.00
IUUC-Aca-005383	Anolis carolinensis	40.71	3.00e-68	250.00
IUUC-Aly-005462	Arabidopsis lyrata	75.00	3.00e-146	509.00
IUUC-Ath-006609	Arabidopsis thaliana	74.69	5.00e-146	509.00
IUUC-Ago-007804	Ashbya gossypii	33.44	5.00e-39	153.00
IUUC-Acl-008217	Aspergillus clavatus	34.60	1.00e-44	172.00
IUUC-Afl-008539	Aspergillus flavus	32.64	4.00e-43	167.00
IUUC-Afu-009105	Aspergillus fumigatus	36.51	8.00e-47	179.00
IUUC-Ani-009474	Aspergillus nidulans	33.13	1.00e-42	166.00
IUUC-Ang-009858	Aspergillus niger	34.02	3.00e-44	171.00
IUUC-Aor-009955	Aspergillus oryzae	32.64	4.00e-43	167.00
IUUC-Ate-010364	Aspergillus terreus	36.45	2.00e-46	178.00
IUUC-Ame-010661	Astyanax mexicanus	40.66	2.00e-65	242.00
IUUC-Bgr-012008	Blumeria graminis	32.20	4.00e-39	154.00
IUUC-Bta-013022	Bos taurus	40.33	2.00e-64	238.00
IUUC-Bdi-014222	Brachypodium distachyon	71.34	5.00e-141	492.00
IUUC-Bol-015485	Brassica oleracea	71.56	2.00e-143	500.00
IUUC-Bra-016914	Brassica rapa	71.39	2.00e-142	496.00
IUUC-Cel-018276	Caenorhabditis elegans	28.48	8.00e-43	166.00
IUUC-Cja-019309	Callithrix jacchus	40.38	6.00e-68	249.00
IUUC-Cfa-020345	Canis familiaris	40.38	6.00e-68	249.00
IUUC-Cpo-022227	Cavia porcellus	35.78	2.00e-54	204.00
IUUC-Csa-023267	Chlorocebus sabaeus	39.10	3.00e-68	250.00
IUUC-Cin-025628	Ciona intestinalis	42.41	3.00e-71	260.00
IUUC-Csv-026164	Ciona savignyi	42.49	2.00e-72	265.00
IUUC-Cgl-026516	Colletotrichum gloeosporioides	30.37	2.00e-35	141.00
IUUC-Cme-027288	Cyanidioschyzon merolae	33.72	3.00e-50	191.00
IUUC-Dre-028001	Danio rerio	40.71	5.00e-69	253.00
IUUC-Dno-029056	Dasypus novemcinctus	40.38	6.00e-68	249.00
IUUC-Dor-031078	Dipodomys ordii	36.14	4.00e-40	155.00
IUUC-Dse-031152	Dothistroma septosporum	30.79	3.00e-38	151.00
IUUC-Dme-032085	Drosophila melanogaster	41.67	8.00e-73	265.00
IUUC-Ete-033158	Echinops telfairi	39.42	4.00e-67	246.00
IUUC-Eca-033879	Equus caballus	40.96	1.00e-55	209.00
IUUC-Eeu-035229	Erinaceus europaeus	34.43	4.00e-49	187.00
IUUC-Fca-035896	Felis catus	40.38	6.00e-68	249.00
IUUC-Fal-036843	Ficedula albicollis	40.66	2.00e-65	242.00
IUUC-Fox-037858	Fusarium oxysporum	33.02	2.00e-41	162.00
IUUC-Gmo-038506	Gadus morhua	40.20	8.00e-64	236.00
IUUC-Ggr-040090	Gaeumannomyces graminis	31.33	2.00e-39	155.00
IUUC-Gga-040192	Gallus gallus	40.71	9.00e-69	252.00
IUUC-Gac-042494	Gasterosteus aculeatus	40.39	7.00e-63	233.00
IUUC-Gma-042835	Glycine max	79.64	2.00e-160	556.00
IUUC-Ggo-044584	Gorilla gorilla	38.78	4.00e-68	250.00
IUUC-Hsa-045866	Homo sapiens	40.38	6.00e-68	249.00
IUUC-Hvu-047690	Hordeum vulgare	68.29	7.00e-138	481.00
IUUC-Itr-048338	Ictidomys tridecemlineatus	40.38	6.00e-68	249.00
IUUC-Kpa-049249	Komagataella pastoris	35.39	4.00e-48	184.00
IUUC-Lch-050431	Latimeria chalumnae	40.39	3.00e-65	241.00
IUUC-Lpe-050812	Leersia perrieri	69.59	1.00e-131	461.00
IUUC-Lma-053026	Leptosphaeria maculans	31.58	3.00e-42	164.00
IUUC-Laf-054265	Loxodonta africana	36.43	9.00e-50	189.00
IUUC-Mcc-055583	Macaca mulatta	40.38	6.00e-68	249.00
IUUC-Meu-056113	Macropus eugenii	32.69	1.00e-45	175.00
IUUC-Mor-057267	Magnaporthe oryzae	32.28	2.00e-35	142.00
IUUC-Mpo-057502	Magnaporthe poae	31.65	9.00e-40	156.00
IUUC-Mtr-058607	Medicago truncatula	76.29	1.00e-153	534.00
IUUC-Mla-058815	Melampsora laricipopulina	35.96	8.00e-54	202.00
IUUC-Mga-059407	Meleagris gallopavo	41.41	1.00e-59	221.00
IUUC-Mvi-060411	Microbotryum violaceum	34.50	4.00e-53	201.00
IUUC-Mmr-061470	Microcebus murinus	40.38	6.00e-68	249.00
IUUC-Mdo-062860	Monodelphis domestica	40.38	8.00e-68	249.00
IUUC-Mmu-063105	Mus musculus	40.38	6.00e-68	249.00
IUUC-Mac-064497	Musa acuminata	80.12	6.00e-154	535.00
IUUC-Mpu-066472	Mustela putorius furo	41.02	7.00e-59	219.00
IUUC-Mlu-067073	Myotis lucifugus	40.20	6.00e-66	243.00
IUUC-Nfi-068284	Neosartorya fischeri	36.19	2.00e-46	178.00
IUUC-Ncr-068702	Neurospora crassa	31.01	9.00e-33	133.00
IUUC-Nle-069451	Nomascus leucogenys	40.38	6.00e-68	249.00
IUUC-Opr-071112	Ochotona princeps	41.02	7.00e-59	219.00
IUUC-Ont-071988	Oreochromis niloticus	40.98	4.00e-66	244.00
IUUC-Oan-072947	Ornithorhynchus anatinus	41.02	5.00e-59	219.00
IUUC-Ocu-074969	Oryctolagus cuniculus	40.38	6.00e-68	249.00
IUUC-Oba-075229	Oryza barthii	69.23	2.00e-132	464.00
IUUC-Obr-076490	Oryza brachyantha	70.66	1.00e-132	464.00
IUUC-Ogl-077381	Oryza glaberrima	69.81	2.00e-130	457.00
IUUC-Ogu-078068	Oryza glumaepatula	70.03	6.00e-132	462.00
IUUC-Oin-079415	Oryza indica	69.54	2.00e-132	464.00
IUUC-Olo-080773	Oryza longistaminata	60.57	3.00e-108	383.00
IUUC-Ome-081277	Oryza meridionalis	58.04	1.00e-98	351.00
IUUC-Oni-082990	Oryza nivara	69.54	6.00e-133	466.00
IUUC-Opu-083374	Oryza punctata	70.03	1.00e-132	464.00
IUUC-Oru-084354	Oryza rufipogon	69.54	9.00e-133	465.00
IUUC-Osa-086154	Oryza sativa	70.03	8.00e-132	461.00
IUUC-Ola-087095	Oryzias latipes	41.03	2.00e-69	254.00
IUUC-Olu-087603	Ostreococcus lucimarinus	37.72	7.00e-56	209.00
IUUC-Oga-088766	Otolemur garnettii	40.38	6.00e-68	249.00
IUUC-Oar-089565	Ovis aries	39.74	3.00e-65	240.00
IUUC-Ptr-091219	Pan troglodytes	38.78	6.00e-68	249.00
IUUC-Pan-091733	Papio anubis	40.38	6.00e-68	249.00
IUUC-Psi-092972	Pelodiscus sinensis	40.20	6.00e-64	237.00
IUUC-Pma-094332	Petromyzon marinus	39.74	3.00e-71	260.00
IUUC-Pno-094960	Phaeosphaeria nodorum	31.89	2.00e-42	165.00
IUUC-Ppa-095546	Physcomitrella patens	58.64	7.00e-118	415.00
IUUC-Pfo-096775	Poecilia formosa	40.98	5.00e-66	244.00
IUUC-Pab-098340	Pongo abelii	38.78	2.00e-68	251.00
IUUC-Pop-099278	Populus trichocarpa	79.61	4.00e-147	512.00
IUUC-Pca-100635	Procavia capensis	40.23	1.00e-56	211.00
IUUC-Ppe-101860	Prunus persica	80.89	2.00e-157	546.00
IUUC-Pva-102798	Pteropus vampyrus	40.38	6.00e-68	249.00
IUUC-Pgr-103395	Puccinia graminis	36.80	2.00e-56	211.00
IUUC-Ptt-103747	Puccinia triticina	36.78	7.00e-53	200.00
IUUC-Pyt-104773	Pyrenophora triticirepentis	31.48	5.00e-42	163.00
IUUC-Rno-106127	Rattus norvegicus	39.62	2.00e-63	234.00
IUUC-Sce-106257	Saccharomyces cerevisiae	31.15	4.00e-36	144.00
IUUC-Sha-107529	Sarcophilus harrisii	37.82	3.00e-61	227.00
IUUC-Sja-107724	Schizosaccharomyces japonicus	29.13	3.00e-35	140.00
IUUC-Sit-110657	Setaria italica	72.96	1.00e-139	488.00
IUUC-Sly-110867	Solanum lycopersicum	76.45	9.00e-154	535.00
IUUC-Sar-113079	Sorex araneus	41.02	7.00e-59	219.00
IUUC-Sbi-114094	Sorghum bicolor	72.96	2.00e-140	490.00
IUUC-Sre-115157	Sporisorium reilianum	28.81	2.00e-37	148.00
IUUC-Ssc-116386	Sus scrofa	40.38	6.00e-68	249.00
IUUC-Tgu-116465	Taeniopygia guttata	41.20	6.00e-55	207.00
IUUC-Tru-117604	Takifugu rubripes	41.31	9.00e-67	246.00
IUUC-Tsy-119314	Tarsius syrichta	30.12	2.00e-32	130.00
IUUC-Tni-120237	Tetraodon nigroviridis	40.98	9.00e-66	243.00
IUUC-Tca-121499	Theobroma cacao	74.26	2.00e-157	548.00
IUUC-Tae-124779	Triticum aestivum	68.90	3.00e-138	483.00
IUUC-Tur-126512	Triticum urartu	69.23	2.00e-119	421.00
IUUC-Ttr-128307	Tursiops truncatus	41.02	7.00e-59	219.00
IUUC-Uma-129579	Ustilago maydis	30.38	7.00e-41	160.00
IUUC-Vda-129826	Verticillium dahliae	30.39	5.00e-38	150.00
IUUC-Vpa-130091	Vicugna pacos	41.02	7.00e-59	219.00
IUUC-Vvi-131040	Vitis vinifera	81.17	5.00e-163	566.00
IUUC-Xtr-132660	Xenopus tropicalis	40.00	2.00e-65	242.00
IUUC-Xma-133496	Xiphophorus maculatus	41.03	1.00e-69	254.00
IUUC-Yli-134509	Yarrowia lipolytica	32.22	3.00e-48	184.00
IUUC-Zma-135700	Zea mays	71.70	5.00e-138	482.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence