iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098907

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000353

Gene Name

POPTRDRAFT_258693; POPTR_0017s10820g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s10820	POPTR_0017s10820.1	POPTR_0017s10820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-17	63.3	113	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH+d+v +l+    + + + s+s D++i++WDlr 
   Q: 113  GHKDKVVSLCMspiN-DSFMSSSLDHSIRIWDLRV 146
           8**********8775.789*************985 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MMSLTELDDD TVRSMSIGAV FSDFGGKINS VDFHRKDDLL VTASEDDSVR LYDIASAKLL 60
KTTYHKKHGT DRICFTHHPS SVICSSVYHL DSTGESLRYL SLYDNRCLRY FKGHKDKVVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGTATATT GTTTTTTAAT TTTTTCGTAG AAAATATCAA TCGTTCTTCC TTGTCCAAAC 60
TCCATCGAAA CCAGATAGAC AGACTCCATC AATATCAGTG GCTATGATGT CGCTTACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0080182--P:histone H3-K4 trimethylation

KEGG

pop:POPTR_0017s10820g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001221	Ailuropoda melanoleuca	41.35	3.00e-67	248.00
IUUC-Apl-003817	Anas platyrhynchos	41.58	1.00e-64	240.00
IUUC-Aca-005383	Anolis carolinensis	41.35	5.00e-67	247.00
IUUC-Aly-005437	Arabidopsis lyrata	83.12	1.00e-159	555.00
IUUC-Ath-006793	Arabidopsis thaliana	83.44	4.00e-160	556.00
IUUC-Ame-010661	Astyanax mexicanus	40.92	3.00e-64	239.00
IUUC-Bta-013022	Bos taurus	41.58	5.00e-64	238.00
IUUC-Bol-016019	Brassica oleracea	79.06	4.00e-162	563.00
IUUC-Bra-017871	Brassica rapa	83.76	1.00e-161	561.00
IUUC-Cja-019309	Callithrix jacchus	41.35	3.00e-67	248.00
IUUC-Cfa-020345	Canis familiaris	41.35	3.00e-67	248.00
IUUC-Csa-023267	Chlorocebus sabaeus	40.71	1.00e-68	252.00
IUUC-Cho-024409	Choloepus hoffmanni	39.26	2.00e-49	188.00
IUUC-Dno-029056	Dasypus novemcinctus	41.35	3.00e-67	248.00
IUUC-Dor-031078	Dipodomys ordii	43.00	1.00e-45	175.00
IUUC-Ete-033158	Echinops telfairi	41.03	1.00e-66	245.00
IUUC-Eca-033879	Equus caballus	43.15	5.00e-57	214.00
IUUC-Eeu-035229	Erinaceus europaeus	34.98	9.00e-47	179.00
IUUC-Fca-035896	Felis catus	41.35	3.00e-67	248.00
IUUC-Fal-036843	Ficedula albicollis	41.58	2.00e-64	239.00
IUUC-Gga-040192	Gallus gallus	41.35	1.00e-67	248.00
IUUC-Ggo-045204	Gorilla gorilla	41.58	2.00e-64	239.00
IUUC-Hsa-045866	Homo sapiens	41.35	3.00e-67	248.00
IUUC-Itr-048338	Ictidomys tridecemlineatus	41.35	3.00e-67	248.00
IUUC-Lch-050431	Latimeria chalumnae	39.94	1.00e-64	240.00
IUUC-Laf-054265	Loxodonta africana	43.87	2.00e-49	188.00
IUUC-Mcc-055583	Macaca mulatta	41.35	3.00e-67	248.00
IUUC-Meu-056113	Macropus eugenii	34.29	4.00e-46	177.00
IUUC-Mga-059407	Meleagris gallopavo	42.80	4.00e-60	223.00
IUUC-Mmr-061470	Microcebus murinus	41.35	3.00e-67	248.00
IUUC-Mdo-062860	Monodelphis domestica	41.35	8.00e-67	246.00
IUUC-Mmu-063105	Mus musculus	41.35	3.00e-67	248.00
IUUC-Mpu-066472	Mustela putorius furo	42.80	5.00e-60	223.00
IUUC-Mlu-067073	Myotis lucifugus	41.37	4.00e-66	244.00
IUUC-Ncr-068702	Neurospora crassa	30.50	8.00e-33	134.00
IUUC-Nle-069451	Nomascus leucogenys	41.35	3.00e-67	248.00
IUUC-Opr-071112	Ochotona princeps	42.80	5.00e-60	223.00
IUUC-Ont-071988	Oreochromis niloticus	42.24	3.00e-65	242.00
IUUC-Oan-072947	Ornithorhynchus anatinus	42.41	8.00e-60	223.00
IUUC-Ocu-074969	Oryctolagus cuniculus	41.35	3.00e-67	248.00
IUUC-Ola-087095	Oryzias latipes	41.67	2.00e-67	248.00
IUUC-Oga-088766	Otolemur garnettii	41.35	3.00e-67	248.00
IUUC-Oar-089565	Ovis aries	40.38	8.00e-65	239.00
IUUC-Pan-091733	Papio anubis	41.35	3.00e-67	248.00
IUUC-Psi-092972	Pelodiscus sinensis	41.12	4.00e-63	235.00
IUUC-Pma-094332	Petromyzon marinus	40.71	4.00e-71	260.00
IUUC-Pfo-096775	Poecilia formosa	42.24	4.00e-65	241.00
IUUC-Pab-098340	Pongo abelii	40.38	1.00e-68	252.00
IUUC-Pca-100635	Procavia capensis	42.02	2.00e-58	218.00
IUUC-Pva-102798	Pteropus vampyrus	41.35	4.00e-67	247.00
IUUC-Rno-106127	Rattus norvegicus	40.58	3.00e-63	234.00
IUUC-Sja-107724	Schizosaccharomyces japonicus	34.03	5.00e-42	164.00
IUUC-Sar-113079	Sorex araneus	42.80	5.00e-60	223.00
IUUC-Ssc-116386	Sus scrofa	41.35	3.00e-67	248.00
IUUC-Tgu-116465	Taeniopygia guttata	42.97	8.00e-56	211.00
IUUC-Tru-117604	Takifugu rubripes	42.62	2.00e-66	246.00
IUUC-Tni-120237	Tetraodon nigroviridis	42.57	9.00e-66	244.00
IUUC-Tme-126883	Tuber melanosporum	33.33	7.00e-46	177.00
IUUC-Ttr-128307	Tursiops truncatus	42.80	5.00e-60	223.00
IUUC-Vpa-130091	Vicugna pacos	42.80	5.00e-60	223.00
IUUC-Xtr-132660	Xenopus tropicalis	41.58	7.00e-65	241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence