iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111267

Ensembl Protein ID

Solyc12g035360.1.1

UniProt Accession

K4DDZ8; K4DDZ8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g035360.1	Solyc12g035360.1.1	Solyc12g035360.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-19	68.2	112	145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH+++v +l+    + + ++sGs D+++++WDlr 
   Q: 112  GHKERVVSLCMspvN-DSFLSGSLDHSVRIWDLRV 145
           8**********9633.89**************985 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MALSELTDDI IGSMAVGATF SDFGGQINSL DFHRTEDLLI TASEDDSIRL FDIANGKLLK 60
TTYHKKHGAD RICFTHHPHS VICSSIHNLD VHGESLRYLS MYDNRCLRYF KGHKERVVSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACTGT CGGAGCTCAC CGATGACATT ATTGGGAGCA TGGCCGTTGG AGCCACTTTC 60
TCAGATTTTG TGAGTTTCTC CTTCGACACA TTTATATTCA ATTGAGAGTT TTGAGTTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0080182--P:histone H3-K4 trimethylation
GO:0048586--P:regulation of long-day photoperiodism, flowering
GO:0048510--P:regulation of timing of transition from vegetative to reproductive phase

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001012	Aegilops tauschii	74.32	6.00e-113	399.00
IUUC-Aml-001221	Ailuropoda melanoleuca	42.31	2.00e-68	251.00
IUUC-Atr-002592	Amborella trichopoda	76.98	5.00e-130	456.00
IUUC-Apl-003817	Anas platyrhynchos	42.48	1.00e-65	243.00
IUUC-Aca-005383	Anolis carolinensis	42.49	1.00e-67	248.00
IUUC-Aly-005437	Arabidopsis lyrata	76.43	6.00e-149	519.00
IUUC-Ath-006793	Arabidopsis thaliana	77.07	3.00e-149	520.00
IUUC-Ago-007804	Ashbya gossypii	33.55	1.00e-38	152.00
IUUC-Afl-008539	Aspergillus flavus	32.58	2.00e-42	165.00
IUUC-Ani-009474	Aspergillus nidulans	33.65	2.00e-40	159.00
IUUC-Ang-009858	Aspergillus niger	32.26	7.00e-41	160.00
IUUC-Aor-009955	Aspergillus oryzae	32.58	2.00e-42	165.00
IUUC-Ate-010364	Aspergillus terreus	33.43	2.00e-42	165.00
IUUC-Ame-010661	Astyanax mexicanus	42.16	8.00e-66	244.00
IUUC-Bgr-012008	Blumeria graminis	33.94	1.00e-43	169.00
IUUC-Bta-013022	Bos taurus	42.30	4.00e-65	241.00
IUUC-Bci-013966	Botrytis cinerea	34.05	5.00e-42	164.00
IUUC-Bdi-015066	Brachypodium distachyon	75.16	5.00e-147	512.00
IUUC-Bol-016019	Brassica oleracea	76.09	1.00e-150	524.00
IUUC-Bra-017871	Brassica rapa	77.39	4.00e-151	526.00
IUUC-Cel-018276	Caenorhabditis elegans	30.37	4.00e-44	171.00
IUUC-Cja-019309	Callithrix jacchus	42.31	2.00e-68	251.00
IUUC-Cfa-020345	Canis familiaris	42.31	2.00e-68	251.00
IUUC-Cpo-022227	Cavia porcellus	38.66	2.00e-56	211.00
IUUC-Csa-023267	Chlorocebus sabaeus	41.67	3.00e-69	254.00
IUUC-Cho-024409	Choloepus hoffmanni	39.26	8.00e-49	186.00
IUUC-Cin-025628	Ciona intestinalis	44.30	4.00e-71	260.00
IUUC-Csv-026164	Ciona savignyi	43.49	6.00e-72	263.00
IUUC-Cne-026890	Cryptococcus neoformans	34.31	5.00e-28	117.00
IUUC-Cme-027288	Cyanidioschyzon merolae	36.33	1.00e-51	196.00
IUUC-Dre-028001	Danio rerio	42.49	5.00e-69	253.00
IUUC-Dno-029704	Dasypus novemcinctus	43.27	7.00e-69	253.00
IUUC-Dor-031078	Dipodomys ordii	43.50	3.00e-46	177.00
IUUC-Dse-031152	Dothistroma septosporum	31.91	2.00e-39	155.00
IUUC-Dme-032085	Drosophila melanogaster	42.99	6.00e-72	263.00
IUUC-Ete-033158	Echinops telfairi	42.63	5.00e-69	253.00
IUUC-Eca-033879	Equus caballus	43.60	1.00e-57	216.00
IUUC-Fca-035896	Felis catus	42.31	2.00e-68	251.00
IUUC-Fal-036843	Ficedula albicollis	42.48	1.00e-65	243.00
IUUC-Fox-037858	Fusarium oxysporum	32.96	1.00e-41	163.00
IUUC-Fso-038386	Fusarium solani	32.93	2.00e-35	142.00
IUUC-Gmo-038506	Gadus morhua	43.00	2.00e-65	243.00
IUUC-Ggr-040090	Gaeumannomyces graminis	33.65	6.00e-41	160.00
IUUC-Gga-040192	Gallus gallus	42.49	8.00e-69	253.00
IUUC-Gac-041551	Gasterosteus aculeatus	40.63	3.00e-66	244.00
IUUC-Gma-044074	Glycine max	79.94	2.00e-156	543.00
IUUC-Ggo-044584	Gorilla gorilla	41.35	1.00e-69	255.00
IUUC-Hsa-045866	Homo sapiens	42.31	2.00e-68	251.00
IUUC-Hvu-047731	Hordeum vulgare	78.08	4.00e-122	429.00
IUUC-Itr-048338	Ictidomys tridecemlineatus	42.31	2.00e-68	251.00
IUUC-Kpa-049249	Komagataella pastoris	33.55	5.00e-44	170.00
IUUC-Lch-050431	Latimeria chalumnae	41.43	4.00e-66	244.00
IUUC-Lpe-050830	Leersia perrieri	75.72	3.00e-147	513.00
IUUC-Lma-053026	Leptosphaeria maculans	31.90	7.00e-41	160.00
IUUC-Mcc-055583	Macaca mulatta	42.31	2.00e-68	251.00
IUUC-Meu-056113	Macropus eugenii	35.14	5.00e-47	180.00
IUUC-Mor-057267	Magnaporthe oryzae	32.82	5.00e-37	147.00
IUUC-Mpo-057502	Magnaporthe poae	33.12	6.00e-41	160.00
IUUC-Mtr-058200	Medicago truncatula	73.00	3.00e-151	526.00
IUUC-Mla-058815	Melampsora laricipopulina	35.12	6.00e-54	204.00
IUUC-Mga-059407	Meleagris gallopavo	43.80	3.00e-61	227.00
IUUC-Mvi-060411	Microbotryum violaceum	34.65	3.00e-52	198.00
IUUC-Mmr-061470	Microcebus murinus	42.31	2.00e-68	251.00
IUUC-Mdo-062860	Monodelphis domestica	41.85	1.00e-67	249.00
IUUC-Mmu-063105	Mus musculus	42.31	2.00e-68	251.00
IUUC-Mac-065314	Musa acuminata	78.85	3.00e-156	543.00
IUUC-Mpu-066472	Mustela putorius furo	43.58	5.00e-61	226.00
IUUC-Mlu-067073	Myotis lucifugus	42.02	1.00e-66	245.00
IUUC-Nfi-068284	Neosartorya fischeri	32.26	4.00e-41	161.00
IUUC-Ncr-068702	Neurospora crassa	30.38	7.00e-31	127.00
IUUC-Nle-069451	Nomascus leucogenys	42.31	2.00e-68	251.00
IUUC-Opr-071112	Ochotona princeps	43.58	5.00e-61	226.00
IUUC-Ont-071988	Oreochromis niloticus	42.81	3.00e-66	245.00
IUUC-Oan-072947	Ornithorhynchus anatinus	43.80	3.00e-61	227.00
IUUC-Ocu-074969	Oryctolagus cuniculus	42.31	2.00e-68	251.00
IUUC-Oba-075394	Oryza barthii	65.11	2.00e-103	367.00
IUUC-Obr-076456	Oryza brachyantha	75.96	9.00e-147	511.00
IUUC-Ogl-076973	Oryza glaberrima	76.04	3.00e-147	513.00
IUUC-Ogu-078296	Oryza glumaepatula	65.47	8.00e-104	368.00
IUUC-Oin-079656	Oryza indica	76.36	1.00e-147	514.00
IUUC-Olo-080893	Oryza longistaminata	64.54	4.00e-118	416.00
IUUC-Ome-081559	Oryza meridionalis	71.25	1.00e-66	244.00
IUUC-Oni-083104	Oryza nivara	65.47	8.00e-104	368.00
IUUC-Opu-084098	Oryza punctata	61.86	4.00e-110	389.00
IUUC-Oru-084364	Oryza rufipogon	65.47	2.00e-104	370.00
IUUC-Osa-086296	Oryza sativa	76.36	1.00e-147	514.00
IUUC-Ola-087095	Oryzias latipes	42.49	9.00e-69	252.00
IUUC-Olu-087603	Ostreococcus lucimarinus	37.54	3.00e-54	204.00
IUUC-Oga-088766	Otolemur garnettii	42.31	2.00e-68	251.00
IUUC-Oar-089565	Ovis aries	41.99	2.00e-67	248.00
IUUC-Ptr-091219	Pan troglodytes	41.03	2.00e-69	254.00
IUUC-Pan-091733	Papio anubis	42.31	2.00e-68	251.00
IUUC-Psi-092972	Pelodiscus sinensis	42.02	4.00e-64	238.00
IUUC-Pma-094332	Petromyzon marinus	41.03	3.00e-72	264.00
IUUC-Pno-094960	Phaeosphaeria nodorum	32.31	4.00e-42	164.00
IUUC-Ppa-095292	Physcomitrella patens	66.35	1.00e-124	438.00
IUUC-Pfo-096775	Poecilia formosa	42.81	5.00e-66	244.00
IUUC-Pab-098340	Pongo abelii	41.35	2.00e-69	255.00
IUUC-Pop-099608	Populus trichocarpa	83.71	5.00e-163	566.00
IUUC-Pca-100635	Procavia capensis	42.41	2.00e-59	221.00
IUUC-Ppe-101452	Prunus persica	81.09	9.00e-158	548.00
IUUC-Pva-102798	Pteropus vampyrus	42.31	3.00e-68	251.00
IUUC-Pgr-103395	Puccinia graminis	35.96	1.00e-54	206.00
IUUC-Ptt-103747	Puccinia triticina	38.05	2.00e-55	209.00
IUUC-Pyt-104773	Pyrenophora triticirepentis	31.90	2.00e-42	166.00
IUUC-Rno-106127	Rattus norvegicus	41.53	7.00e-64	236.00
IUUC-Sce-106257	Saccharomyces cerevisiae	33.22	2.00e-39	155.00
IUUC-Sha-107529	Sarcophilus harrisii	40.32	7.00e-63	233.00
IUUC-Sja-107724	Schizosaccharomyces japonicus	34.13	2.00e-42	165.00
IUUC-Spo-108206	Schizosaccharomyces pombe	32.58	1.00e-41	162.00
IUUC-Smo-109591	Selaginella moellendorffii	64.63	1.00e-121	428.00
IUUC-Sit-109858	Setaria italica	76.60	3.00e-148	516.00
IUUC-Sar-113079	Sorex araneus	43.58	5.00e-61	226.00
IUUC-Sbi-114232	Sorghum bicolor	79.40	2.00e-112	397.00
IUUC-Sre-115157	Sporisorium reilianum	29.91	2.00e-39	155.00
IUUC-Ssc-116386	Sus scrofa	42.31	2.00e-68	251.00
IUUC-Tgu-116465	Taeniopygia guttata	42.75	5.00e-57	214.00
IUUC-Tru-117604	Takifugu rubripes	43.46	1.00e-67	249.00
IUUC-Tni-120237	Tetraodon nigroviridis	42.06	5.00e-67	248.00
IUUC-Tca-121853	Theobroma cacao	81.11	5.00e-164	569.00
IUUC-Tre-122205	Trichoderma reesei	32.04	2.00e-39	155.00
IUUC-Tvi-122471	Trichoderma virens	30.24	1.00e-29	122.00
IUUC-Tae-125200	Triticum aestivum	75.72	3.00e-146	509.00
IUUC-Tme-126883	Tuber melanosporum	37.67	6.00e-46	177.00
IUUC-Tbe-127310	Tupaia belangeri	39.84	7.00e-20	90.50
IUUC-Ttr-128307	Tursiops truncatus	43.58	5.00e-61	226.00
IUUC-Uma-129579	Ustilago maydis	31.32	1.00e-44	172.00
IUUC-Vda-129826	Verticillium dahliae	34.65	1.00e-40	159.00
IUUC-Vpa-130091	Vicugna pacos	43.58	5.00e-61	226.00
IUUC-Vvi-131587	Vitis vinifera	83.12	7.00e-161	558.00
IUUC-Xtr-132660	Xenopus tropicalis	42.16	6.00e-66	244.00
IUUC-Xma-133496	Xiphophorus maculatus	42.81	2.00e-69	254.00
IUUC-Zma-134685	Zea mays	75.80	3.00e-148	516.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence