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Tag Content
iUUCD ID IUUC-Aly-005805
Ensembl Protein ID scaffold_100381.1
UniProt Accession D7KDC5; D7KDC5_ARALL
Genbank Protein ID EFH68461.1
Protein Name Auxin-responsive protein
Genbank Nucleotide ID GL348713
Gene Name SHY2; ARALYDRAFT_887587
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_100381.1 scaffold_100381.1 scaffold_100381.1
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UDP/UFD/PB1 1.60e-17 64.1 94 179
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliq 82
    + vkvs++g+++++++dl+ + ++++Llka++ ++ ++k+s++ ++YeD+dGD++ l +D+++++++ ++rl+i+
   Q: 94 IYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVmFKfsvgeyferdGYKGSDFVPTYEDKDGDWM-LIGDVPWEMFIC------TCKRLRIM 178
    78*******************************6448899999999*******************.************......9******9 PP
   S: 83 k 83
    k
   Q: 179 K 179
    8 PP
   

Organism Arabidopsis lyrata
Functional Description
(View)

Functional Description



     Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
Protein Sequence
(Fasta)
MDEFVNLKET ELRLGLPGTD NVCEEKESII SCCNNNNKRA LSSDNEKENE SSSRKTETSP 60
PRKAQIVGWP PVRSYRKNNI QTKKNESEHE GQGIYVKVSM DGAPYLRKID LSCYKGYSEL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-005805|ULD,PB1|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCCCGCAAT TCTTGAAGAA ATGGATGAGT TTGTTAACCT CAAGGAAACG GAGCTGAGGC 60
TGGGATTACC AGGAACAGAC AATGTTTGTG AAGAAAAAGA GAGCATTATT TCTTGCTGTA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-005805|ULD,PB1|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0044212--F:transcription regulatory region DNA binding
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG aly:ARALYDRAFT_887587
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000969 Aegilops tauschii 44.88 8.00e-38 149.00
IUUC-Ath-007370 Arabidopsis thaliana 94.21 2.00e-104 371.00
IUUC-Bol-015408 Brassica oleracea 81.15 1.00e-86 310.00
IUUC-Bra-017254 Brassica rapa 82.63 3.00e-89 319.00
IUUC-Csa-023469 Chlorocebus sabaeus 40.00 1.20e+00 26.20
IUUC-Mtr-058557 Medicago truncatula 58.76 3.00e-59 220.00
IUUC-Mac-064820 Musa acuminata 56.70 7.00e-55 205.00
IUUC-Ncr-068890 Neurospora crassa 37.74 2.30e-01 29.30
IUUC-Oba-075141 Oryza barthii 50.75 3.00e-46 177.00
IUUC-Ogu-078093 Oryza glumaepatula 49.25 3.00e-45 173.00
IUUC-Oin-079780 Oryza indica 48.76 4.00e-44 169.00
IUUC-Oni-083078 Oryza nivara 48.76 4.00e-44 169.00
IUUC-Oru-084991 Oryza rufipogon 48.76 4.00e-44 169.00
IUUC-Osa-085321 Oryza sativa 48.76 4.00e-44 169.00
IUUC-Pab-098295 Pongo abelii 40.00 4.90e-01 26.90
IUUC-Pop-099628 Populus trichocarpa 61.81 3.00e-65 240.00
IUUC-Ppe-101322 Prunus persica 63.68 1.00e-68 251.00
IUUC-Sit-109772 Setaria italica 50.54 4.00e-44 171.00
IUUC-Sly-110939 Solanum lycopersicum 65.45 6.00e-64 236.00
Created Date 25-Jun-2017

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