iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G04160	GLYMA18G04160.2	GLYMA18G04160.2
GLYMA18G04160	GLYMA18G04160.4	GLYMA18G04160.4
GLYMA18G04160	GLYMA18G04160.5	GLYMA18G04160.5
GLYMA18G04160	GLYMA18G04160.6	GLYMA18G04160.6

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.30e-08	34.9	213	254

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle     d +++lpC H+fha+C+  w       +++ +CP+C+
   Q: 213  CSVCLEQVnvGDVLRSLPCLHQFHANCIDPW------LRQQGTCPVCK 254
           9*****887777799****************......**********7 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSFVFRGTRA DIENGFPGFI PERRALRVHA TRPSNSNSLT FLVTVLLLFM ILNSHQMSPN 60
FLLWLVLGVF LMATMLRMYA TCQQLQAQAQ AHAAAASGIL GHTELRLHMP PSIALASRGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTCTCGTT ATTTTATCGC TGTAATTTGT AGTAGCAGAG GAATGGACGT ATATGCTTGA 60
GGATTACCGC ACACCACACA CAGACTTGAC CTCTTTTTTG TTTAACAAAA ATCTAAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

gmx:100777936

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000396	Aegilops tauschii	56.01	7.00e-60	224.00
IUUC-Atr-002651	Amborella trichopoda	67.90	9.00e-78	283.00
IUUC-Aly-006305	Arabidopsis lyrata	78.18	3.00e-97	348.00
IUUC-Ath-007026	Arabidopsis thaliana	76.81	4.00e-95	340.00
IUUC-Bdi-015038	Brachypodium distachyon	66.55	6.00e-74	270.00
IUUC-Bol-015365	Brassica oleracea	77.27	2.00e-87	315.00
IUUC-Bra-017904	Brassica rapa	79.17	9.00e-89	319.00
IUUC-Fso-038141	Fusarium solani	44.74	2.00e-15	77.40
IUUC-Hvu-047764	Hordeum vulgare	67.74	1.00e-68	252.00
IUUC-Lpe-051371	Leersia perrieri	70.00	4.00e-76	277.00
IUUC-Mtr-058078	Medicago truncatula	93.43	8.00e-122	429.00
IUUC-Mac-065081	Musa acuminata	72.38	8.00e-83	300.00
IUUC-Oba-075903	Oryza barthii	62.83	1.00e-30	125.00
IUUC-Obr-076184	Oryza brachyantha	62.83	5.00e-67	248.00
IUUC-Ogl-076965	Oryza glaberrima	70.48	3.00e-75	275.00
IUUC-Ogu-078414	Oryza glumaepatula	62.96	2.00e-62	232.00
IUUC-Oin-079430	Oryza indica	70.48	4.00e-75	274.00
IUUC-Olo-080739	Oryza longistaminata	69.74	6.00e-75	273.00
IUUC-Ome-081538	Oryza meridionalis	69.74	3.00e-75	275.00
IUUC-Oni-082633	Oryza nivara	69.74	2.00e-75	275.00
IUUC-Opu-084125	Oryza punctata	71.59	1.00e-76	279.00
IUUC-Oru-085061	Oryza rufipogon	62.96	2.00e-62	232.00
IUUC-Osa-086209	Oryza sativa	70.48	4.00e-75	274.00
IUUC-Pno-094874	Phaeosphaeria nodorum	33.64	6.00e-13	68.90
IUUC-Ppa-095613	Physcomitrella patens	54.51	3.00e-48	185.00
IUUC-Pop-099911	Populus trichocarpa	84.19	6.00e-98	350.00
IUUC-Ppe-101792	Prunus persica	85.02	1.00e-102	365.00
IUUC-Sha-107618	Sarcophilus harrisii	50.88	1.00e-13	70.10
IUUC-Smo-108870	Selaginella moellendorffii	58.02	2.00e-62	231.00
IUUC-Sly-111915	Solanum lycopersicum	82.64	2.00e-94	338.00
IUUC-Stu-112568	Solanum tuberosum	70.91	2.00e-79	290.00
IUUC-Sar-113693	Sorex araneus	55.81	1.00e-11	65.50
IUUC-Sbi-113958	Sorghum bicolor	67.63	4.00e-77	280.00
IUUC-Tca-121289	Theobroma cacao	84.70	9.00e-96	342.00
IUUC-Tae-125497	Triticum aestivum	70.00	1.00e-67	249.00
IUUC-Tur-125977	Triticum urartu	63.64	4.00e-61	228.00
IUUC-Vvi-131326	Vitis vinifera	86.47	1.00e-95	342.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence