iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d028593	Zm00001d028593_T003	Zm00001d028593_T003
Zm00001d028593	Zm00001d028593_T002	Zm00001d028593_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-06	30.6	235	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle     d +++lpC H+fh +C+  w       +++ +CP+C+
   Q: 235  CSVCLEQVtvGDLLRSLPCLHQFHVNCIDPW------LRQQGTCPICK 276
           9*****9966444999***************......**********7 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSFVFRGSRT DIEAGGFPGF APERRAMRIH AGSRPVNSNS LAFLLTVLVL FMVLNSHQIS 60
PNLLVSFRAQ WSVRGVHESI ELWLVLGVFL MATSLRMYAT CQQLAHAAAA NSFLGHTELR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGAAACCGC TGAACGGCAG AAAACCCAGG CCTTTCTAGC TTCTGCTATC CTGCTGCTGC 60
CCCTCTTTCC CCCAATCTGC AGGCTGCAGG CGCTGCTCCT TTCGCCCTCC GCTAGCGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022982	Chlamydomonas reinhardtii	56.60	4.00e-13	68.60
IUUC-Fso-038141	Fusarium solani	30.61	7.00e-16	78.20
IUUC-Hvu-047764	Hordeum vulgare	76.25	7.00e-94	336.00
IUUC-Ppe-101792	Prunus persica	64.69	8.00e-91	326.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence