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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006952
Ensembl Protein ID AT2G20330.1
UniProt Accession Q9SK69; Q9SK69_ARATH
Genbank Protein ID AAD21755.1; AAK32933.1; AAL16252.1; AAM91426.1; AEC06994.1
Protein Name At2g20330/F11A3.12; Putative WD-40 repeat protein; Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID AC006569; AF367346; AF428322; AY133596; CP002685
Gene Name At2g20330; F11A3.12; F11A3_12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G20330 AT2G20330.1 AT2G20330.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.60e-22 78.4 372 404
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           Htd++t+++f sd ++l+s s Dg++kvWDlr+
   Q: 372  HTDDITSVKFsSDgRILLSRSFDGSLKVWDLRQ 404
           ***********998999*************987 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MEDELEGLRA HFPVSFGKTS KVSASTEAIH SATRRTDVAN DAGVSSDITT KKPDSDKSGF 60
PSLSSSSQTW LRSVRGPNRN PNSSGDVAMG PPPPPSSKRT QEEEEEDEEV MMGPPPPPKG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006952|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTTTAGGCCC AATATTGTTG TGTCTTATGG ACTTAACCGC CACAATCTTT TGTCGCCGGT 60
AACAGCAACG GGAATTTTCA TGGCGGCGAG GTCACCGGAC GTTATATAAT TTGTATCCCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006952|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
KEGG ath:AT2G20330
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000150 Aegilops tauschii 74.79 0.00e+00 784.00
IUUC-Aml-002098 Ailuropoda melanoleuca 39.71 3.00e-65 241.00
IUUC-Atr-002886 Amborella trichopoda 77.34 0.00e+00 809.00
IUUC-Apl-004059 Anas platyrhynchos 42.18 4.00e-95 341.00
IUUC-Aca-004427 Anolis carolinensis 44.21 7.00e-111 394.00
IUUC-Aly-006122 Arabidopsis lyrata 92.84 0.00e+00 1116.00
IUUC-Acl-008150 Aspergillus clavatus 33.40 1.00e-66 246.00
IUUC-Afl-008722 Aspergillus flavus 34.23 2.00e-71 263.00
IUUC-Afu-009003 Aspergillus fumigatus 34.16 1.00e-69 256.00
IUUC-Ani-009306 Aspergillus nidulans 33.21 6.00e-66 244.00
IUUC-Ang-009780 Aspergillus niger 33.40 9.00e-64 237.00
IUUC-Aor-010109 Aspergillus oryzae 34.03 1.00e-70 260.00
IUUC-Ate-010484 Aspergillus terreus 33.02 1.00e-68 253.00
IUUC-Ame-011248 Astyanax mexicanus 44.33 6.00e-108 384.00
IUUC-Bgr-012093 Blumeria graminis 33.66 8.00e-71 260.00
IUUC-Bta-013581 Bos taurus 42.21 4.00e-108 384.00
IUUC-Bci-013900 Botrytis cinerea 32.82 1.00e-70 260.00
IUUC-Bdi-014951 Brachypodium distachyon 75.21 0.00e+00 792.00
IUUC-Bol-016482 Brassica oleracea 83.46 0.00e+00 994.00
IUUC-Bra-016976 Brassica rapa 80.35 0.00e+00 944.00
IUUC-Cel-018229 Caenorhabditis elegans 35.54 9.00e-79 287.00
IUUC-Cja-019101 Callithrix jacchus 42.33 8.00e-109 387.00
IUUC-Cfa-020638 Canis familiaris 42.21 4.00e-108 384.00
IUUC-Cpo-022323 Cavia porcellus 41.80 1.00e-107 383.00
IUUC-Csa-023743 Chlorocebus sabaeus 42.13 3.00e-108 385.00
IUUC-Cho-024356 Choloepus hoffmanni 36.73 4.00e-45 175.00
IUUC-Cin-025151 Ciona intestinalis 40.76 3.00e-102 365.00
IUUC-Csv-025820 Ciona savignyi 37.13 1.00e-94 339.00
IUUC-Cgl-026404 Colletotrichum gloeosporioides 35.88 2.00e-75 275.00
IUUC-Cne-026790 Cryptococcus neoformans 41.10 6.00e-89 320.00
IUUC-Dno-029526 Dasypus novemcinctus 41.92 3.00e-108 385.00
IUUC-Dse-031347 Dothistroma septosporum 34.61 9.00e-70 257.00
IUUC-Dme-032052 Drosophila melanogaster 42.35 2.00e-104 372.00
IUUC-Ete-032851 Echinops telfairi 40.32 5.00e-57 214.00
IUUC-Fca-035931 Felis catus 42.21 2.00e-108 386.00
IUUC-Fal-037139 Ficedula albicollis 44.63 9.00e-107 380.00
IUUC-Fox-037696 Fusarium oxysporum 33.46 2.00e-73 269.00
IUUC-Fso-038349 Fusarium solani 34.24 2.00e-72 266.00
IUUC-Gmo-039027 Gadus morhua 44.21 7.00e-107 380.00
IUUC-Ggr-039982 Gaeumannomyces graminis 32.33 6.00e-56 211.00
IUUC-Gga-041080 Gallus gallus 43.60 2.00e-105 375.00
IUUC-Gac-041296 Gasterosteus aculeatus 44.33 1.00e-106 379.00
IUUC-Gma-044316 Glycine max 81.12 0.00e+00 852.00
IUUC-Ggo-045123 Gorilla gorilla 40.49 2.00e-101 361.00
IUUC-Hsa-046541 Homo sapiens 42.13 1.00e-108 386.00
IUUC-Itr-048403 Ictidomys tridecemlineatus 42.42 1.00e-108 386.00
IUUC-Lch-050163 Latimeria chalumnae 43.55 7.00e-109 386.00
IUUC-Lpe-051614 Leersia perrieri 76.86 0.00e+00 782.00
IUUC-Loc-052721 Lepisosteus oculatus 42.59 6.00e-111 394.00
IUUC-Lma-053034 Leptosphaeria maculans 33.66 8.00e-70 257.00
IUUC-Laf-053704 Loxodonta africana 42.42 2.00e-108 385.00
IUUC-Mcc-055688 Macaca mulatta 42.33 8.00e-109 387.00
IUUC-Mor-057275 Magnaporthe oryzae 32.39 1.00e-65 243.00
IUUC-Mpo-057450 Magnaporthe poae 33.59 2.00e-70 259.00
IUUC-Mtr-057970 Medicago truncatula 82.16 0.00e+00 852.00
IUUC-Mla-059172 Melampsora laricipopulina 41.91 1.00e-105 376.00
IUUC-Mvi-060266 Microbotryum violaceum 42.60 1.00e-97 349.00
IUUC-Mmr-061611 Microcebus murinus 42.01 4.00e-108 384.00
IUUC-Mdo-062609 Monodelphis domestica 41.60 4.00e-104 371.00
IUUC-Mmu-064354 Mus musculus 41.60 7.00e-107 380.00
IUUC-Mac-065632 Musa acuminata 65.94 0.00e+00 823.00
IUUC-Mpu-066749 Mustela putorius furo 42.01 1.00e-107 383.00
IUUC-Mlu-067579 Myotis lucifugus 42.01 1.00e-107 383.00
IUUC-Nfi-068556 Neosartorya fischeri 34.35 3.00e-70 258.00
IUUC-Ncr-068877 Neurospora crassa 36.01 4.00e-74 271.00
IUUC-Nle-069176 Nomascus leucogenys 42.13 1.00e-108 386.00
IUUC-Opr-070293 Ochotona princeps 41.80 5.00e-107 381.00
IUUC-Ont-071297 Oreochromis niloticus 44.04 2.00e-106 379.00
IUUC-Oan-073450 Ornithorhynchus anatinus 40.00 5.00e-20 89.40
IUUC-Ocu-074449 Oryctolagus cuniculus 41.60 5.00e-108 384.00
IUUC-Oba-075858 Oryza barthii 77.10 0.00e+00 798.00
IUUC-Obr-076052 Oryza brachyantha 77.08 0.00e+00 800.00
IUUC-Ogl-077756 Oryza glaberrima 77.23 0.00e+00 806.00
IUUC-Ogu-078993 Oryza glumaepatula 76.89 0.00e+00 795.00
IUUC-Oin-079429 Oryza indica 77.02 0.00e+00 801.00
IUUC-Olo-080823 Oryza longistaminata 77.20 0.00e+00 779.00
IUUC-Ome-081852 Oryza meridionalis 77.02 0.00e+00 803.00
IUUC-Oni-082474 Oryza nivara 76.89 0.00e+00 795.00
IUUC-Opu-083450 Oryza punctata 73.38 0.00e+00 753.00
IUUC-Oru-084642 Oryza rufipogon 77.10 0.00e+00 798.00
IUUC-Osa-086011 Oryza sativa 77.02 0.00e+00 801.00
IUUC-Ola-086398 Oryzias latipes 43.04 1.00e-104 373.00
IUUC-Olu-087769 Ostreococcus lucimarinus 43.91 3.00e-110 391.00
IUUC-Oga-088727 Otolemur garnettii 42.42 1.00e-108 385.00
IUUC-Oar-090392 Ovis aries 42.42 1.00e-108 386.00
IUUC-Ptr-090921 Pan troglodytes 42.13 1.00e-108 386.00
IUUC-Pan-092085 Papio anubis 41.58 1.00e-102 366.00
IUUC-Psi-093709 Pelodiscus sinensis 43.62 6.00e-108 384.00
IUUC-Pno-095050 Phaeosphaeria nodorum 32.31 1.00e-69 256.00
IUUC-Ppa-095333 Physcomitrella patens 67.56 0.00e+00 709.00
IUUC-Pfo-097401 Poecilia formosa 43.83 9.00e-105 373.00
IUUC-Pab-097766 Pongo abelii 42.13 1.00e-108 386.00
IUUC-Pop-099011 Populus trichocarpa 68.33 0.00e+00 854.00
IUUC-Pca-100351 Procavia capensis 34.44 4.00e-41 162.00
IUUC-Ppe-101384 Prunus persica 78.84 0.00e+00 868.00
IUUC-Pva-102654 Pteropus vampyrus 42.21 3.00e-108 385.00
IUUC-Pgr-103415 Puccinia graminis 42.98 1.00e-106 379.00
IUUC-Ptt-103925 Puccinia triticina 42.98 3.00e-108 385.00
IUUC-Pte-104394 Pyrenophora teres 32.88 1.00e-69 256.00
IUUC-Pyt-104674 Pyrenophora triticirepentis 32.43 1.00e-68 253.00
IUUC-Rno-105663 Rattus norvegicus 41.72 9.00e-108 383.00
IUUC-Sha-107567 Sarcophilus harrisii 42.77 5.00e-115 407.00
IUUC-Sja-107939 Schizosaccharomyces japonicus 31.72 4.00e-59 221.00
IUUC-Spo-108037 Schizosaccharomyces pombe 33.14 4.00e-59 221.00
IUUC-Ssl-108526 Sclerotinia sclerotiorum 32.81 2.00e-69 255.00
IUUC-Smo-108751 Selaginella moellendorffii 59.03 0.00e+00 753.00
IUUC-Sit-110170 Setaria italica 76.41 0.00e+00 800.00
IUUC-Sly-111518 Solanum lycopersicum 77.18 0.00e+00 783.00
IUUC-Stu-112755 Solanum tuberosum 83.40 0.00e+00 863.00
IUUC-Sar-113590 Sorex araneus 38.17 3.00e-75 275.00
IUUC-Sbi-114091 Sorghum bicolor 76.88 0.00e+00 805.00
IUUC-Sre-115111 Sporisorium reilianum 31.71 5.00e-48 185.00
IUUC-Ssc-115453 Sus scrofa 41.67 3.00e-102 365.00
IUUC-Tgu-117285 Taeniopygia guttata 45.25 3.00e-107 381.00
IUUC-Tru-118474 Takifugu rubripes 41.61 3.00e-103 369.00
IUUC-Tsy-119547 Tarsius syrichta 41.45 3.00e-89 322.00
IUUC-Tni-120818 Tetraodon nigroviridis 41.18 4.00e-105 374.00
IUUC-Tca-121621 Theobroma cacao 81.74 0.00e+00 860.00
IUUC-Tre-122146 Trichoderma reesei 35.08 7.00e-77 280.00
IUUC-Tvi-122353 Trichoderma virens 34.50 1.00e-74 273.00
IUUC-Tae-123385 Triticum aestivum 75.36 4.00e-162 563.00
IUUC-Tur-125971 Triticum urartu 74.84 0.00e+00 761.00
IUUC-Tme-127185 Tuber melanosporum 32.04 9.00e-60 223.00
IUUC-Tbe-127554 Tupaia belangeri 34.38 2.00e-37 150.00
IUUC-Ttr-128995 Tursiops truncatus 42.21 3.00e-108 385.00
IUUC-Uma-129618 Ustilago maydis 30.04 9.00e-48 184.00
IUUC-Vda-129832 Verticillium dahliae 31.32 4.00e-61 228.00
IUUC-Vpa-130592 Vicugna pacos 39.86 5.00e-50 191.00
IUUC-Vvi-131574 Vitis vinifera 68.09 0.00e+00 878.00
IUUC-Xtr-132234 Xenopus tropicalis 43.16 1.00e-107 383.00
IUUC-Xma-133780 Xiphophorus maculatus 42.55 5.00e-106 377.00
IUUC-Yli-134658 Yarrowia lipolytica 30.61 4.00e-11 62.40
IUUC-Zma-135697 Zea mays 76.04 0.00e+00 795.00
Created Date 25-Jun-2017

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