iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-040050

Ensembl Protein ID

GGTG_11759T0

UniProt Accession

J3PE36; J3PE36_GAGT3

Genbank Protein ID

EJT70736.1

Protein Name

WD repeat-containing protein

Genbank Nucleotide ID

ADBI01000977

Gene Name

GGTG_11759

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_11759	GGTG_11759T0	GGTG_11759T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-15	56.3	125	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlr 31
           H   vtcla  + ++++sGsdD +++vW+l 
   Q: 125  HVQAVTCLAT-TaHHVLSGSDDSNVHVWSLA 154
           8899***997.6689*************985 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MLSEEFVSAI CGPPLTSNTS IAKDVGVYVH TLSPAYSVKG TFKKNSAPPN CLAVNESHVF 60
AAQDGKAALH VYSRPRGNQE AYVPFPEKIR CVALAGDVLV LGTTEGRIML WEYCTGRLVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCACACAGGC TGCCAGGAAA TTTTCTTCTG TGCAAGTTGA GGCTGGCGGC AACACGCCAG 60
CACGCGCGCC CACGTGAGGC CCTTGACCAA CACTCCTTCC AGACCACAGC AGATCAACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001040	Aegilops tauschii	27.64	5.00e-15	73.90
IUUC-Aml-001819	Ailuropoda melanoleuca	28.37	4.00e-10	57.80
IUUC-Atr-002688	Amborella trichopoda	27.94	2.00e-17	82.00
IUUC-Aly-006061	Arabidopsis lyrata	26.67	1.00e-23	102.00
IUUC-Ath-007111	Arabidopsis thaliana	27.03	8.00e-21	93.20
IUUC-Acl-008357	Aspergillus clavatus	41.32	2.00e-71	262.00
IUUC-Afl-008564	Aspergillus flavus	41.08	1.00e-69	256.00
IUUC-Afu-009113	Aspergillus fumigatus	42.51	3.00e-75	274.00
IUUC-Ani-009132	Aspergillus nidulans	41.14	1.00e-70	258.00
IUUC-Ang-009586	Aspergillus niger	41.85	8.00e-71	259.00
IUUC-Aor-009882	Aspergillus oryzae	41.08	1.00e-68	252.00
IUUC-Ate-010249	Aspergillus terreus	41.10	7.00e-69	253.00
IUUC-Ame-010912	Astyanax mexicanus	25.99	2.00e-22	98.20
IUUC-Bgr-012242	Blumeria graminis	35.10	1.00e-69	255.00
IUUC-Bta-013402	Bos taurus	26.64	2.00e-13	68.60
IUUC-Bci-013791	Botrytis cinerea	40.84	1.00e-90	325.00
IUUC-Bdi-015054	Brachypodium distachyon	28.40	1.00e-17	82.80
IUUC-Bol-016304	Brassica oleracea	33.54	3.00e-16	77.00
IUUC-Bra-016793	Brassica rapa	28.07	9.00e-18	82.80
IUUC-Cja-019758	Callithrix jacchus	28.03	5.00e-13	67.40
IUUC-Cpo-021438	Cavia porcellus	29.20	3.00e-20	90.90
IUUC-Csa-023416	Chlorocebus sabaeus	26.99	2.00e-12	65.10
IUUC-Csv-025918	Ciona savignyi	24.40	2.00e-16	78.60
IUUC-Cgl-026618	Colletotrichum gloeosporioides	52.34	3.00e-132	463.00
IUUC-Cne-026843	Cryptococcus neoformans	30.08	5.00e-18	84.30
IUUC-Dre-027560	Danio rerio	27.33	1.00e-23	102.00
IUUC-Dno-029315	Dasypus novemcinctus	28.52	5.00e-20	90.50
IUUC-Dor-030935	Dipodomys ordii	27.43	1.00e-19	89.00
IUUC-Dse-031492	Dothistroma septosporum	41.06	1.00e-65	242.00
IUUC-Dme-032059	Drosophila melanogaster	26.69	4.00e-18	84.70
IUUC-Fox-037903	Fusarium oxysporum	54.01	2.00e-123	433.00
IUUC-Fso-038214	Fusarium solani	60.98	6.00e-75	272.00
IUUC-Gac-042641	Gasterosteus aculeatus	28.57	3.00e-19	87.80
IUUC-Gma-044265	Glycine max	27.11	5.00e-22	97.10
IUUC-Hvu-047685	Hordeum vulgare	28.57	3.00e-16	77.80
IUUC-Itr-048032	Ictidomys tridecemlineatus	27.22	2.00e-20	91.70
IUUC-Kpa-049129	Komagataella pastoris	25.30	3.00e-18	85.10
IUUC-Lch-049532	Latimeria chalumnae	26.46	2.00e-21	95.10
IUUC-Lpe-051321	Leersia perrieri	28.08	2.00e-17	81.60
IUUC-Loc-052471	Lepisosteus oculatus	27.08	2.00e-16	78.20
IUUC-Lma-053091	Leptosphaeria maculans	40.76	3.00e-70	257.00
IUUC-Laf-054331	Loxodonta africana	27.59	9.00e-14	69.70
IUUC-Mcc-055803	Macaca mulatta	26.99	2.00e-12	65.10
IUUC-Meu-056090	Macropus eugenii	26.30	3.00e-19	87.80
IUUC-Mor-057160	Magnaporthe oryzae	63.88	2.00e-154	537.00
IUUC-Mtr-058800	Medicago truncatula	29.83	2.00e-22	98.60
IUUC-Mla-058943	Melampsora laricipopulina	24.37	3.00e-10	58.50
IUUC-Mvi-060315	Microbotryum violaceum	30.41	3.00e-14	72.00
IUUC-Mmr-061127	Microcebus murinus	27.91	1.00e-14	72.40
IUUC-Mdo-062350	Monodelphis domestica	25.95	2.00e-18	85.50
IUUC-Mmu-063706	Mus musculus	27.24	1.00e-18	85.50
IUUC-Mac-065066	Musa acuminata	26.40	2.00e-08	50.40
IUUC-Mpu-066711	Mustela putorius furo	27.72	3.00e-19	87.80
IUUC-Nfi-068454	Neosartorya fischeri	42.51	3.00e-75	274.00
IUUC-Ncr-068914	Neurospora crassa	51.64	6.00e-120	422.00
IUUC-Nle-069518	Nomascus leucogenys	26.24	3.00e-12	64.70
IUUC-Ont-071435	Oreochromis niloticus	28.24	6.00e-19	87.00
IUUC-Oba-075873	Oryza barthii	28.77	2.00e-20	92.00
IUUC-Ogl-077840	Oryza glaberrima	28.77	2.00e-20	91.70
IUUC-Ogu-077988	Oryza glumaepatula	28.77	2.00e-20	92.00
IUUC-Olo-080415	Oryza longistaminata	29.28	2.00e-19	89.70
IUUC-Ome-081952	Oryza meridionalis	28.03	2.00e-19	88.60
IUUC-Oni-082300	Oryza nivara	28.77	2.00e-20	92.00
IUUC-Opu-083436	Oryza punctata	29.85	1.00e-14	72.40
IUUC-Oru-085164	Oryza rufipogon	28.77	1.00e-20	92.80
IUUC-Osa-086129	Oryza sativa	28.42	3.00e-20	90.90
IUUC-Ola-086571	Oryzias latipes	27.91	2.00e-18	85.10
IUUC-Oga-088561	Otolemur garnettii	27.91	2.00e-15	75.10
IUUC-Pan-092810	Papio anubis	26.99	2.00e-12	65.90
IUUC-Pno-095047	Phaeosphaeria nodorum	39.78	4.00e-59	220.00
IUUC-Ppa-095317	Physcomitrella patens	30.17	1.00e-11	62.80
IUUC-Pab-097747	Pongo abelii	26.64	1.00e-12	66.20
IUUC-Pop-099609	Populus trichocarpa	28.23	9.00e-23	99.80
IUUC-Pca-100972	Procavia capensis	32.19	1.00e-11	62.80
IUUC-Ppe-101904	Prunus persica	27.55	2.00e-19	88.60
IUUC-Pte-104120	Pyrenophora teres	40.27	5.00e-70	256.00
IUUC-Pyt-104558	Pyrenophora triticirepentis	42.08	4.00e-71	260.00
IUUC-Rno-104933	Rattus norvegicus	26.90	2.00e-18	85.50
IUUC-Sce-106403	Saccharomyces cerevisiae	24.48	5.00e-15	74.30
IUUC-Sha-107636	Sarcophilus harrisii	26.64	8.00e-20	90.10
IUUC-Sja-107783	Schizosaccharomyces japonicus	26.52	6.00e-29	120.00
IUUC-Spo-108192	Schizosaccharomyces pombe	24.26	3.00e-22	97.80
IUUC-Ssl-108384	Sclerotinia sclerotiorum	40.59	3.00e-92	330.00
IUUC-Smo-109498	Selaginella moellendorffii	28.71	1.00e-17	82.80
IUUC-Sit-110770	Setaria italica	27.61	2.00e-21	95.10
IUUC-Sly-111453	Solanum lycopersicum	29.49	3.00e-21	94.70
IUUC-Stu-112384	Solanum tuberosum	29.91	2.00e-21	95.90
IUUC-Sbi-113952	Sorghum bicolor	29.17	2.00e-22	98.20
IUUC-Sre-115223	Sporisorium reilianum	29.82	4.00e-18	84.70
IUUC-Ssc-115627	Sus scrofa	27.68	8.00e-14	69.70
IUUC-Tru-117629	Takifugu rubripes	28.70	3.00e-19	87.80
IUUC-Tni-119839	Tetraodon nigroviridis	25.41	4.00e-13	67.80
IUUC-Tca-121766	Theobroma cacao	29.56	3.00e-24	104.00
IUUC-Tre-122047	Trichoderma reesei	55.18	3.00e-125	439.00
IUUC-Tvi-122668	Trichoderma virens	53.70	9.00e-126	441.00
IUUC-Tae-125634	Triticum aestivum	27.64	4.00e-15	74.30
IUUC-Tme-127070	Tuber melanosporum	32.88	6.00e-46	176.00
IUUC-Ttr-128735	Tursiops truncatus	28.08	2.00e-13	68.60
IUUC-Uma-129521	Ustilago maydis	30.28	2.00e-19	89.40
IUUC-Vvi-130872	Vitis vinifera	29.29	1.00e-21	95.90
IUUC-Xtr-131838	Xenopus tropicalis	29.01	2.00e-16	78.60
IUUC-Yli-134551	Yarrowia lipolytica	30.38	5.00e-16	77.40
IUUC-Zma-134703	Zea mays	28.79	5.00e-22	97.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence