iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108128

Ensembl Protein ID

SPAC824.04.1:pep

UniProt Accession

Q9UT39; YIQ4_SCHPO

Genbank Protein ID

CAB57334.1

Protein Name

Uncharacterized WD repeat-containing protein C824.04

Genbank Nucleotide ID

CU329670

Gene Name

swd22; SPAC824.04

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPAC824.04	SPAC824.04.1	SPAC824.04.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	HINT	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-11	42.8	106	137

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtd v++++  +  + +vs ++D+t+k+W +
   Q: 106  GHTDIVSSIEVsPIeDQFVSTANDKTLKLWKM 137
           8********99732578*************96 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MDIGILSSLK PAQSFRDNSL GSFINSIDYS DSGEYVATTC SADDTVQIYD ALDPKQVHTI 60
TCFETGIEVA RFTHHDHNLL LSTTKGNKDI QYVSIYDNKR ISYFSGHTDI VSSIEVSPIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAAAACTGT ATACTAAAAC GTGCTACAGT TCGTTAAACA CGTTGTCTGG CACTACTCTA 60
ATTTTGTGGA ATCACAAGTA AACAAATGCA AGCAAGGGCT TAGCAAAGTA GAAAGGCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:1990567--C:DPS complex
GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0000790--C:nuclear chromatin
GO:0005634--C:nucleus
GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0080182--P:histone H3-K4 trimethylation
GO:0006379--P:mRNA cleavage
GO:0006378--P:mRNA polyadenylation
GO:1905213--P:negative regulation of mitotic chromosome condensation

KEGG

spo:SPAC824.04

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	28.11	4.00e-31	126.00
IUUC-Aly-005437	Arabidopsis lyrata	30.29	9.00e-39	151.00
IUUC-Ath-006793	Arabidopsis thaliana	30.59	4.00e-39	152.00
IUUC-Acl-008217	Aspergillus clavatus	33.24	3.00e-53	200.00
IUUC-Ani-009474	Aspergillus nidulans	33.53	4.00e-53	199.00
IUUC-Bci-013966	Botrytis cinerea	32.14	1.00e-43	168.00
IUUC-Bra-017871	Brassica rapa	30.79	1.00e-39	154.00
IUUC-Cin-025628	Ciona intestinalis	32.75	2.00e-45	173.00
IUUC-Csv-026164	Ciona savignyi	32.66	4.00e-45	172.00
IUUC-Fox-037858	Fusarium oxysporum	31.77	1.00e-49	188.00
IUUC-Fso-038386	Fusarium solani	31.20	7.00e-46	175.00
IUUC-Meu-056113	Macropus eugenii	26.20	4.00e-27	113.00
IUUC-Mpo-057502	Magnaporthe poae	33.91	2.00e-53	201.00
IUUC-Mvi-060411	Microbotryum violaceum	32.87	3.00e-55	207.00
IUUC-Ome-081277	Oryza meridionalis	30.57	8.00e-16	75.50
IUUC-Sja-107747	Schizosaccharomyces japonicus	53.69	9.00e-100	354.00
IUUC-Sbi-113826	Sorghum bicolor	28.89	6.00e-32	129.00
IUUC-Tre-122205	Trichoderma reesei	32.14	9.00e-51	192.00
IUUC-Tvi-122471	Trichoderma virens	28.49	5.00e-39	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence