iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWD 29
           gHtd+v+ +a+    d+ ++s+s D+t+++W+
   Q: 18   GHTDRVWNVAWnpaADGVIASCSADKTVRIWE 49
           8***********98669**************8 PP

UBD/Beta-Prp

   S: 44   llrsl.sgheaevtavkfspdgkilvtgseDrtikvw..dls...........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgq 127
           +l++l  gh+++v++++f+  g+ +vt+s+D ++k+w  d+s           t  c+ +   h+++++s+++s+ + +++sG  d+ti+++ +++++
   Q: 180  TLSELnNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWktDISrmqsgegyvpwTHVCTLSGF-HDRTIYSVHWSR-DGVIASGAGDDTIQLF-VDSDS 274
           56788899*****************************7766699999999988888877777.9***********.99*************8.66666 PP
   S: 128  clee.........tlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlkt 168
            + +          ++ h+  vn+v++ pd+  +ll+s+s+D++v++W+l++
   Q: 275  DSVDgpsykllvkKEKAHEMDVNSVQWAPDKesRLLASASDDKMVKIWKLAS 326
           66666888888889999**********99877799*************9976 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.

Protein Sequence
(Fasta)

MKVMDKNLGL EEVQKLEGHT DRVWNVAWNP AADGVIASCS ADKTVRIWEQ SSLTRSWTCK 60
LGHRLGSFDG NTCVWENFAT DSESVSVLRG HESEVKSVSW NASGSLLATC GRDKSVWIWE 120

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Nucleotide Sequence
(Fasta)

ATGAAAGTGA TGGATAAGAA TTTAGGGTTA GAGGAGGTTC AGAAACTTGA AGGTCACACT 60
GATCGTGTTT GGAACGTCGC CTGGAATCCC GCCGCTGACG GTGTTATTGC TTCCTGCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR028608--CIAO1/Cia1
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0097361--C:CIA complex
GO:0016226--P:iron-sulfur cluster assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005812	Arabidopsis lyrata	85.63	3.00e-165	573.00
IUUC-Cgl-026435	Colletotrichum gloeosporioides	35.25	1.00e-28	120.00
IUUC-Fox-038058	Fusarium oxysporum	34.42	4.00e-32	132.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence