iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003136

Ensembl Protein ID

ERN18665

UniProt Accession

U5D8X8; U5D8X8_AMBTC

Genbank Protein ID

ERN18665.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392088

Gene Name

AMTR_s00065p00194240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00065p00194240	ERN18665	ERN18665

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-41	137.1	495	533
UBD/Beta-Prp	1.90e-67	228.0	340	653

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+++  +++++++Gs D+t+++WD+ tg +++
   Q: 495  GHLSDVDCVQWhvNCNYIATGSSDKTVRLWDVQTGECVR 533
           8***********766*********************986 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl............................lrslsgheaevtavkfspdgkilvtgseDrtik 77
           +++h++  ++c  +s+d+sl+a g+ d+++kvwd+++                                  l+gh+++v++++f p g++++++s D ti+
   Q: 340  INTHNS--LNCASISRDGSLVAGGFSDSSVKVWDMSKIGQqsengnvqgeieaaqkgqvlgqengkrsYTLLQGHSGPVYSTTFCPLGDFILSSSADSTIR 438
           555555..88889999********************987799************************955555***************************** PP
   S: 78   vwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           +w+ + +  ++ +kgh++ +++++fsp g++++s shdrt+r+w ++  q l+ + +gh + v cv++h ++n++++Gs D+tvrlWd++tg+++r + g 
   Q: 439  LWSTKLNANLVCYKGHNYPIWDVQFSPVGHYFASSSHDRTARIWSMDRIQPLR-IMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQTGECVRIFLG- 537
           *****************************************************.*********************************************9. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW....dlrsgdllktlqlhn.........ss 266
           h +++ s++++++g++++sg++dg + +wdl++g+cv  l+ght+ v+ v+fs ++ +l+sgs+D ++++W    +++      +++++n         ++
   Q: 538  HRGMILSIAMSPDGRYMASGDEDGMIMMWDLSSGKCVTPLTGHTSCVWTVAFSCEGSLLASGSADCTVKLWdvnaNTKGPRAEEKVTNTNrlrflktlpTK 638
           ***********************************************************************554433333334444444478888888888 PP
   S: 267  visvavlsfgdnvlv 281
           +++v +l+f++++l+
   Q: 639  STPVYALQFSRRNLL 653
           888888888877665 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MDDEEIHRAV MTYLKKKGFK QTELAFQEEQ RKDLSSVETD PDIARQIISF AESENGPAKY 60
KEDYSKLRSW TYSSLDLYRH ELLRVLYPVF VHCFMDLVAK GHGQEARNFF LAYREDHELL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGACG AAGAGATACA TAGGGCGGTC ATGACGTATT TGAAGAAGAA GGGTTTCAAG 60
CAAACTGAGC TCGCATTTCA AGAGGAGCAG AGAAAAGATC TCTCTTCTGT GGAGACTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

atr:18447034

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	61.96	0.00e+00	677.00
IUUC-Aml-001607	Ailuropoda melanoleuca	46.48	1.00e-95	343.00
IUUC-Apl-004193	Anas platyrhynchos	47.56	3.00e-96	345.00
IUUC-Aca-004522	Anolis carolinensis	37.25	6.00e-119	420.00
IUUC-Aly-006476	Arabidopsis lyrata	68.65	0.00e+00	908.00
IUUC-Ath-006587	Arabidopsis thaliana	70.90	0.00e+00	922.00
IUUC-Ago-007736	Ashbya gossypii	40.64	8.00e-91	327.00
IUUC-Acl-008092	Aspergillus clavatus	31.28	1.00e-90	326.00
IUUC-Afl-008659	Aspergillus flavus	31.00	4.00e-89	321.00
IUUC-Afu-008902	Aspergillus fumigatus	31.42	3.00e-91	328.00
IUUC-Ani-009462	Aspergillus nidulans	30.13	3.00e-73	268.00
IUUC-Aor-010083	Aspergillus oryzae	31.00	4.00e-89	321.00
IUUC-Ate-010271	Aspergillus terreus	36.39	3.00e-70	258.00
IUUC-Ame-010721	Astyanax mexicanus	43.08	5.00e-94	337.00
IUUC-Bgr-012257	Blumeria graminis	29.88	4.00e-77	281.00
IUUC-Bta-013539	Bos taurus	46.48	8.00e-96	343.00
IUUC-Bci-013737	Botrytis cinerea	29.38	4.00e-81	294.00
IUUC-Bdi-015041	Brachypodium distachyon	68.76	0.00e+00	823.00
IUUC-Bol-015483	Brassica oleracea	69.64	0.00e+00	931.00
IUUC-Bra-017147	Brassica rapa	69.94	0.00e+00	933.00
IUUC-Cel-018451	Caenorhabditis elegans	33.78	1.00e-56	213.00
IUUC-Cja-018881	Callithrix jacchus	46.48	2.00e-95	342.00
IUUC-Cfa-020056	Canis familiaris	46.48	9.00e-96	343.00
IUUC-Cpo-021454	Cavia porcellus	36.51	6.00e-118	417.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	38.01	8.00e-63	233.00
IUUC-Csa-023045	Chlorocebus sabaeus	46.48	2.00e-95	342.00
IUUC-Cho-024638	Choloepus hoffmanni	42.15	9.00e-77	280.00
IUUC-Cin-025457	Ciona intestinalis	51.72	1.00e-75	275.00
IUUC-Csv-025882	Ciona savignyi	40.56	4.00e-78	284.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	31.35	7.00e-58	217.00
IUUC-Cne-026876	Cryptococcus neoformans	39.27	4.00e-70	258.00
IUUC-Cme-027302	Cyanidioschyzon merolae	36.01	4.00e-114	404.00
IUUC-Dre-027980	Danio rerio	43.86	1.00e-94	340.00
IUUC-Dno-028863	Dasypus novemcinctus	46.48	1.00e-95	343.00
IUUC-Dor-030561	Dipodomys ordii	46.48	2.00e-95	342.00
IUUC-Dse-031547	Dothistroma septosporum	31.75	1.00e-88	320.00
IUUC-Dme-031917	Drosophila melanogaster	42.67	6.00e-80	290.00
IUUC-Ete-032712	Echinops telfairi	41.00	5.00e-75	274.00
IUUC-Eca-033927	Equus caballus	46.48	2.00e-95	342.00
IUUC-Eeu-034449	Erinaceus europaeus	48.65	1.00e-87	316.00
IUUC-Fca-036325	Felis catus	46.48	1.00e-95	343.00
IUUC-Fal-036604	Ficedula albicollis	47.58	3.00e-95	341.00
IUUC-Fox-038049	Fusarium oxysporum	29.72	7.00e-47	181.00
IUUC-Fso-038302	Fusarium solani	34.88	1.00e-51	197.00
IUUC-Gmo-038832	Gadus morhua	44.19	3.00e-92	332.00
IUUC-Ggr-039878	Gaeumannomyces graminis	29.26	9.00e-73	266.00
IUUC-Gga-041147	Gallus gallus	36.68	6.00e-117	414.00
IUUC-Gac-041373	Gasterosteus aculeatus	42.26	1.00e-91	329.00
IUUC-Gma-043230	Glycine max	72.82	0.00e+00	960.00
IUUC-Ggo-044568	Gorilla gorilla	40.31	1.00e-75	276.00
IUUC-Hsa-045971	Homo sapiens	46.48	2.00e-95	342.00
IUUC-Hvu-047695	Hordeum vulgare	71.93	0.00e+00	634.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	46.35	2.00e-95	342.00
IUUC-Kpa-049402	Komagataella pastoris	36.16	8.00e-116	410.00
IUUC-Lch-049526	Latimeria chalumnae	43.84	2.00e-86	311.00
IUUC-Lpe-051560	Leersia perrieri	64.53	0.00e+00	839.00
IUUC-Loc-052882	Lepisosteus oculatus	45.04	2.00e-92	332.00
IUUC-Lma-053212	Leptosphaeria maculans	37.04	2.00e-63	236.00
IUUC-Laf-053859	Loxodonta africana	46.48	1.00e-95	342.00
IUUC-Mcc-054957	Macaca mulatta	46.48	5.00e-95	340.00
IUUC-Meu-056182	Macropus eugenii	42.08	1.00e-75	275.00
IUUC-Mor-057024	Magnaporthe oryzae	29.28	2.00e-71	262.00
IUUC-Mpo-057520	Magnaporthe poae	29.53	1.00e-69	256.00
IUUC-Mtr-058754	Medicago truncatula	73.76	0.00e+00	1013.00
IUUC-Mla-058881	Melampsora laricipopulina	35.65	1.00e-75	276.00
IUUC-Mga-059776	Meleagris gallopavo	36.78	2.00e-117	415.00
IUUC-Mvi-060208	Microbotryum violaceum	30.81	8.00e-91	327.00
IUUC-Mmr-061783	Microcebus murinus	46.48	5.00e-95	340.00
IUUC-Mdo-062856	Monodelphis domestica	46.76	3.00e-96	345.00
IUUC-Mmu-064218	Mus musculus	46.48	2.00e-95	342.00
IUUC-Mac-064886	Musa acuminata	63.64	3.00e-127	448.00
IUUC-Mpu-065735	Mustela putorius furo	46.48	1.00e-95	343.00
IUUC-Mlu-067544	Myotis lucifugus	46.35	3.00e-94	338.00
IUUC-Nfi-068502	Neosartorya fischeri	31.69	2.00e-91	328.00
IUUC-Ncr-068891	Neurospora crassa	30.77	3.00e-72	265.00
IUUC-Nle-069389	Nomascus leucogenys	46.48	2.00e-95	342.00
IUUC-Opr-071042	Ochotona princeps	42.82	1.00e-83	303.00
IUUC-Ont-071455	Oreochromis niloticus	43.57	1.00e-95	343.00
IUUC-Oan-073181	Ornithorhynchus anatinus	47.04	6.00e-96	343.00
IUUC-Ocu-073758	Oryctolagus cuniculus	46.48	2.00e-95	342.00
IUUC-Oba-075739	Oryza barthii	63.40	0.00e+00	767.00
IUUC-Obr-076111	Oryza brachyantha	68.93	0.00e+00	905.00
IUUC-Ogl-077914	Oryza glaberrima	67.22	0.00e+00	851.00
IUUC-Ogu-078057	Oryza glumaepatula	60.18	0.00e+00	719.00
IUUC-Oin-079473	Oryza indica	68.45	0.00e+00	861.00
IUUC-Olo-080645	Oryza longistaminata	69.62	3.00e-123	434.00
IUUC-Ome-081831	Oryza meridionalis	60.49	0.00e+00	720.00
IUUC-Oni-082441	Oryza nivara	61.10	0.00e+00	726.00
IUUC-Opu-083239	Oryza punctata	57.91	0.00e+00	719.00
IUUC-Oru-085131	Oryza rufipogon	61.26	0.00e+00	728.00
IUUC-Osa-086189	Oryza sativa	68.15	0.00e+00	857.00
IUUC-Ola-086574	Oryzias latipes	43.38	5.00e-94	337.00
IUUC-Olu-087616	Ostreococcus lucimarinus	38.85	2.00e-123	435.00
IUUC-Oga-088827	Otolemur garnettii	46.48	2.00e-95	342.00
IUUC-Oar-089648	Ovis aries	46.48	9.00e-96	343.00
IUUC-Ptr-091195	Pan troglodytes	46.48	2.00e-95	342.00
IUUC-Pan-091978	Papio anubis	46.48	2.00e-95	342.00
IUUC-Psi-093598	Pelodiscus sinensis	36.71	1.00e-103	369.00
IUUC-Pma-094593	Petromyzon marinus	40.89	2.00e-61	229.00
IUUC-Pno-094823	Phaeosphaeria nodorum	30.75	6.00e-85	307.00
IUUC-Ppa-095455	Physcomitrella patens	59.56	0.00e+00	796.00
IUUC-Pfo-097120	Poecilia formosa	44.06	7.00e-95	340.00
IUUC-Pab-098771	Pongo abelii	46.48	2.00e-95	342.00
IUUC-Pop-099542	Populus trichocarpa	72.51	0.00e+00	979.00
IUUC-Pca-100727	Procavia capensis	41.32	2.00e-75	275.00
IUUC-Ppe-101686	Prunus persica	76.04	0.00e+00	1015.00
IUUC-Pva-103211	Pteropus vampyrus	41.33	2.00e-77	281.00
IUUC-Pgr-103603	Puccinia graminis	30.58	1.00e-85	310.00
IUUC-Ptt-103995	Puccinia triticina	31.22	8.00e-70	258.00
IUUC-Pte-104359	Pyrenophora teres	31.77	3.00e-88	318.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	31.63	2.00e-86	312.00
IUUC-Rno-105064	Rattus norvegicus	46.48	2.00e-95	342.00
IUUC-Sce-106186	Saccharomyces cerevisiae	31.29	7.00e-102	363.00
IUUC-Sha-106582	Sarcophilus harrisii	45.38	6.00e-97	347.00
IUUC-Sja-107949	Schizosaccharomyces japonicus	31.71	1.00e-89	322.00
IUUC-Spo-108142	Schizosaccharomyces pombe	34.20	5.00e-112	397.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	29.33	3.00e-78	285.00
IUUC-Smo-109111	Selaginella moellendorffii	59.87	0.00e+00	704.00
IUUC-Sit-109804	Setaria italica	71.00	0.00e+00	900.00
IUUC-Sly-111693	Solanum lycopersicum	71.30	0.00e+00	961.00
IUUC-Sar-113381	Sorex araneus	41.71	3.00e-79	288.00
IUUC-Sbi-114849	Sorghum bicolor	70.60	0.00e+00	893.00
IUUC-Sre-114945	Sporisorium reilianum	42.94	6.00e-76	278.00
IUUC-Ssc-115582	Sus scrofa	47.69	2.00e-93	335.00
IUUC-Tgu-116899	Taeniopygia guttata	46.48	6.00e-96	343.00
IUUC-Tru-118011	Takifugu rubripes	43.60	3.00e-94	338.00
IUUC-Tsy-119622	Tarsius syrichta	33.51	3.00e-48	185.00
IUUC-Tni-120598	Tetraodon nigroviridis	43.49	2.00e-94	339.00
IUUC-Tca-121247	Theobroma cacao	73.42	0.00e+00	996.00
IUUC-Tre-121949	Trichoderma reesei	32.66	1.00e-56	213.00
IUUC-Tvi-122626	Trichoderma virens	30.89	6.00e-55	207.00
IUUC-Tae-123335	Triticum aestivum	67.82	0.00e+00	823.00
IUUC-Tur-126005	Triticum urartu	61.71	0.00e+00	758.00
IUUC-Tme-126904	Tuber melanosporum	34.56	7.00e-107	380.00
IUUC-Tbe-127254	Tupaia belangeri	39.72	9.00e-74	270.00
IUUC-Ttr-128544	Tursiops truncatus	46.20	3.00e-95	342.00
IUUC-Uma-129379	Ustilago maydis	37.01	8.00e-73	267.00
IUUC-Vda-129761	Verticillium dahliae	36.12	3.00e-51	195.00
IUUC-Vpa-130485	Vicugna pacos	46.48	1.00e-95	343.00
IUUC-Vvi-131171	Vitis vinifera	76.26	0.00e+00	1019.00
IUUC-Xtr-132762	Xenopus tropicalis	40.62	4.00e-75	275.00
IUUC-Xma-133583	Xiphophorus maculatus	44.33	1.00e-94	340.00
IUUC-Yli-134446	Yarrowia lipolytica	40.25	8.00e-124	436.00
IUUC-Zma-135722	Zea mays	68.76	0.00e+00	889.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence