iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039878

Ensembl Protein ID

GGTG_10846T0

UniProt Accession

J3PBH4; J3PBH4_GAGT3

Genbank Protein ID

EJT71591.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADBI01000889

Gene Name

GGTG_10846

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_10846	GGTG_10846T0	GGTG_10846T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-31	106.6	630	658
UBD/Beta-Prp	1.30e-48	165.2	380	659

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf...sdtllvsGsdDgtikvWDl 30
           +++ +++f   s + lvsG+ Dgt+++WD+
   Q: 630  GGIPSISFsveS-NVLVSGGLDGTVRLWDV 658
           5699****9543.9***************7 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.............lrslsgheaevtavkfspdgk....................ilvtg 70
           ++  + +t+++fs+d++l+a+g +d+ i+vw+++ + l              r+l gh+++v++v+fs++ +                    +l+++
   Q: 380  HNTLGSVTSMDFSKDNQLVAAGTMDSYIRVWSLDGKPLkskvpqekgllvnNRKLVGHSGPVYSVSFSDSISnidrnlfgddsnsnvdtgpkLLLSC 476
           566678999**************************999************99*********8888888776666677777788888888888***** PP
   S: 71   seDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl..DrtvrlWd 165
           s D+ +++w+l+  +c+ ++k+h   v  + + p g++++++++d+t+rv+  ++ +  + +  ghd +++ +++hp+g +++s+s+  D+ +r+W+
   Q: 477  SADGQVRLWSLDVWSCLCVYKAHHGPVFRVLWGPHGHYFATAGWDKTVRVFMQDHASAQR-IMVGHDTSITALAWHPNGTYVFSASDeqDKSIRMWS 572
           ***************************************************666666666.************************954499****** PP
   S: 166  lktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdlr 252
           ++tg+++r +tg h d++  +++ +ngk l+s++  g + +wd+ +g  +++++gh    + s+ fs +++ lvsg+ Dg++r+Wd++
   Q: 573  VQTGSCVRVFTG-HADYISAIEVAPNGKILASADAGGNIFFWDIAKGARIKRCRGHGkGGIPSISFSVESNVLVSGGLDGTVRLWDVE 659
           ***********9.******************************************964789************************986 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MSGTGPPNAV PPVAGGAYAG QNPASAPSAA SAAAPQAQSA PAPVTTSPSD LNKIVTDYLL 60
KKGYTQTEAT FRRESAHVSS DGRPIHRRVQ DMGPNRFLQS FNMVRDWVEN NLDVYKFELR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCGAATTTG GGCTGGCAGG GATCCCAGCG CCAGCAGTCA GTCGCCTTGC TGCGAGGCGC 60
ATCTCCCTGC CTGCTGCTGC GGAGCCTGAG CGCGTCCTCG ATTTGAGCCT CACCACCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000124--C:SAGA complex
GO:0046695--C:SLIK (SAGA-like) complex
GO:0005669--C:transcription factor TFIID complex
GO:0003682--F:chromatin binding
GO:0016573--P:histone acetylation
GO:0006366--P:transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	40.34	1.00e-38	153.00
IUUC-Aml-001607	Ailuropoda melanoleuca	35.82	3.00e-60	224.00
IUUC-Atr-003136	Amborella trichopoda	33.91	4.00e-53	201.00
IUUC-Apl-004193	Anas platyrhynchos	34.77	6.00e-60	223.00
IUUC-Aca-004522	Anolis carolinensis	28.28	5.00e-69	254.00
IUUC-Aly-006476	Arabidopsis lyrata	29.29	1.00e-68	252.00
IUUC-Ath-006587	Arabidopsis thaliana	28.98	4.00e-68	251.00
IUUC-Ago-007736	Ashbya gossypii	44.44	3.00e-83	301.00
IUUC-Acl-008092	Aspergillus clavatus	45.66	0.00e+00	652.00
IUUC-Afl-008659	Aspergillus flavus	47.47	0.00e+00	667.00
IUUC-Afu-008902	Aspergillus fumigatus	46.19	0.00e+00	640.00
IUUC-Ani-009462	Aspergillus nidulans	43.98	5.00e-150	523.00
IUUC-Aor-010083	Aspergillus oryzae	47.47	0.00e+00	667.00
IUUC-Ate-010271	Aspergillus terreus	46.27	0.00e+00	646.00
IUUC-Ame-010721	Astyanax mexicanus	37.36	2.00e-61	228.00
IUUC-Bgr-012257	Blumeria graminis	53.61	0.00e+00	671.00
IUUC-Bta-013539	Bos taurus	28.18	1.00e-66	246.00
IUUC-Bci-013737	Botrytis cinerea	50.76	0.00e+00	793.00
IUUC-Bdi-015041	Brachypodium distachyon	33.89	3.00e-44	171.00
IUUC-Bol-015483	Brassica oleracea	28.90	7.00e-68	250.00
IUUC-Bra-017147	Brassica rapa	28.88	3.00e-68	251.00
IUUC-Cel-018451	Caenorhabditis elegans	24.96	2.00e-40	158.00
IUUC-Cja-018881	Callithrix jacchus	28.18	1.00e-66	246.00
IUUC-Cfa-020056	Canis familiaris	35.82	5.00e-60	224.00
IUUC-Cpo-021454	Cavia porcellus	28.74	8.00e-71	260.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	27.96	1.00e-31	129.00
IUUC-Csa-023045	Chlorocebus sabaeus	28.18	1.00e-65	242.00
IUUC-Cho-024638	Choloepus hoffmanni	32.51	6.00e-43	167.00
IUUC-Cin-025457	Ciona intestinalis	39.39	1.00e-44	171.00
IUUC-Csv-025882	Ciona savignyi	35.56	6.00e-58	217.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	65.95	0.00e+00	1021.00
IUUC-Cne-026876	Cryptococcus neoformans	33.11	3.00e-78	285.00
IUUC-Cme-027302	Cyanidioschyzon merolae	34.29	7.00e-47	180.00
IUUC-Dre-027980	Danio rerio	36.86	2.00e-62	232.00
IUUC-Dno-028863	Dasypus novemcinctus	28.18	2.00e-66	245.00
IUUC-Dor-030561	Dipodomys ordii	28.18	1.00e-66	246.00
IUUC-Dse-031547	Dothistroma septosporum	40.48	1.00e-157	548.00
IUUC-Dme-032031	Drosophila melanogaster	33.22	4.00e-40	158.00
IUUC-Ete-032712	Echinops telfairi	31.89	2.00e-40	158.00
IUUC-Eca-033927	Equus caballus	29.08	4.00e-71	261.00
IUUC-Eeu-034449	Erinaceus europaeus	35.82	6.00e-60	224.00
IUUC-Fca-036325	Felis catus	28.18	1.00e-66	246.00
IUUC-Fal-036604	Ficedula albicollis	34.77	8.00e-60	223.00
IUUC-Fox-038049	Fusarium oxysporum	64.10	0.00e+00	806.00
IUUC-Fso-038302	Fusarium solani	67.68	0.00e+00	894.00
IUUC-Gmo-038832	Gadus morhua	36.16	6.00e-62	230.00
IUUC-Gga-041147	Gallus gallus	28.62	2.00e-70	258.00
IUUC-Gac-041373	Gasterosteus aculeatus	37.25	7.00e-62	230.00
IUUC-Gma-043230	Glycine max	34.00	3.00e-51	194.00
IUUC-Ggo-044568	Gorilla gorilla	32.20	1.00e-41	162.00
IUUC-Hsa-045971	Homo sapiens	28.18	1.00e-66	246.00
IUUC-Hvu-047695	Hordeum vulgare	33.89	2.00e-43	168.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	35.82	5.00e-60	224.00
IUUC-Kpa-049402	Komagataella pastoris	35.54	4.00e-105	374.00
IUUC-Lch-049526	Latimeria chalumnae	34.48	6.00e-54	203.00
IUUC-Lpe-051560	Leersia perrieri	34.75	2.00e-51	195.00
IUUC-Loc-052882	Lepisosteus oculatus	36.21	3.00e-62	231.00
IUUC-Lma-053212	Leptosphaeria maculans	42.03	3.00e-144	504.00
IUUC-Laf-053859	Loxodonta africana	28.18	1.00e-66	246.00
IUUC-Mcc-054957	Macaca mulatta	35.82	8.00e-60	223.00
IUUC-Meu-056182	Macropus eugenii	32.20	8.00e-42	163.00
IUUC-Mor-057024	Magnaporthe oryzae	80.73	0.00e+00	1186.00
IUUC-Mpo-057520	Magnaporthe poae	94.71	0.00e+00	1297.00
IUUC-Mtr-058754	Medicago truncatula	29.91	3.00e-71	261.00
IUUC-Mla-058881	Melampsora laricipopulina	34.72	4.00e-62	231.00
IUUC-Mga-059776	Meleagris gallopavo	28.62	3.00e-71	261.00
IUUC-Mvi-060208	Microbotryum violaceum	30.68	1.00e-80	293.00
IUUC-Mmr-061783	Microcebus murinus	35.82	8.00e-60	223.00
IUUC-Mdo-062856	Monodelphis domestica	28.96	5.00e-69	254.00
IUUC-Mmu-064218	Mus musculus	28.18	7.00e-67	247.00
IUUC-Mac-064886	Musa acuminata	39.43	6.00e-38	150.00
IUUC-Mpu-065735	Mustela putorius furo	28.18	1.00e-66	246.00
IUUC-Mlu-067544	Myotis lucifugus	28.14	4.00e-65	241.00
IUUC-Nfi-068502	Neosartorya fischeri	46.80	0.00e+00	647.00
IUUC-Ncr-068891	Neurospora crassa	68.10	0.00e+00	1048.00
IUUC-Nle-069389	Nomascus leucogenys	28.18	1.00e-66	246.00
IUUC-Opr-071042	Ochotona princeps	32.82	6.00e-51	194.00
IUUC-Ont-071455	Oreochromis niloticus	36.68	1.00e-61	229.00
IUUC-Oan-073181	Ornithorhynchus anatinus	28.45	6.00e-68	250.00
IUUC-Ocu-073758	Oryctolagus cuniculus	28.96	2.00e-71	262.00
IUUC-Oba-075739	Oryza barthii	32.42	5.00e-42	164.00
IUUC-Obr-076111	Oryza brachyantha	33.81	1.00e-51	196.00
IUUC-Ogl-077914	Oryza glaberrima	32.19	2.00e-44	172.00
IUUC-Ogu-078190	Oryza glumaepatula	39.46	3.00e-44	171.00
IUUC-Oin-079473	Oryza indica	33.33	4.00e-47	181.00
IUUC-Olo-080645	Oryza longistaminata	41.01	3.00e-40	157.00
IUUC-Ome-081831	Oryza meridionalis	36.77	7.00e-38	150.00
IUUC-Oni-082431	Oryza nivara	39.46	3.00e-44	171.00
IUUC-Opu-083239	Oryza punctata	36.77	1.00e-37	149.00
IUUC-Oru-085131	Oryza rufipogon	31.75	6.00e-39	154.00
IUUC-Osa-086189	Oryza sativa	33.33	4.00e-47	181.00
IUUC-Ola-086574	Oryzias latipes	36.96	2.00e-63	235.00
IUUC-Olu-087616	Ostreococcus lucimarinus	35.37	3.00e-53	201.00
IUUC-Oga-088827	Otolemur garnettii	28.18	1.00e-66	246.00
IUUC-Oar-089648	Ovis aries	28.18	1.00e-66	246.00
IUUC-Ptr-091195	Pan troglodytes	28.18	8.00e-67	246.00
IUUC-Pan-091978	Papio anubis	28.18	1.00e-66	246.00
IUUC-Psi-093598	Pelodiscus sinensis	28.75	4.00e-63	234.00
IUUC-Pma-094593	Petromyzon marinus	31.70	6.00e-36	144.00
IUUC-Pno-094823	Phaeosphaeria nodorum	41.91	4.00e-150	523.00
IUUC-Ppa-095455	Physcomitrella patens	29.73	3.00e-70	258.00
IUUC-Pfo-097120	Poecilia formosa	37.93	4.00e-63	234.00
IUUC-Pab-098771	Pongo abelii	28.18	1.00e-66	246.00
IUUC-Pop-099542	Populus trichocarpa	29.28	5.00e-68	250.00
IUUC-Pca-100727	Procavia capensis	32.20	1.00e-42	166.00
IUUC-Ppe-101686	Prunus persica	27.92	6.00e-65	240.00
IUUC-Pva-102414	Pteropus vampyrus	32.09	3.00e-45	175.00
IUUC-Pgr-103603	Puccinia graminis	28.51	2.00e-73	268.00
IUUC-Ptt-103995	Puccinia triticina	29.51	5.00e-55	208.00
IUUC-Pte-104359	Pyrenophora teres	47.32	1.00e-148	518.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	47.48	3.00e-148	517.00
IUUC-Rno-105064	Rattus norvegicus	35.82	4.00e-60	224.00
IUUC-Sce-106186	Saccharomyces cerevisiae	31.97	7.00e-99	353.00
IUUC-Sha-106582	Sarcophilus harrisii	28.96	5.00e-69	253.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	35.76	2.00e-111	394.00
IUUC-Spo-108142	Schizosaccharomyces pombe	36.63	3.00e-113	400.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	51.94	0.00e+00	786.00
IUUC-Smo-109111	Selaginella moellendorffii	37.65	9.00e-54	202.00
IUUC-Sit-109804	Setaria italica	28.55	5.00e-65	240.00
IUUC-Sly-111693	Solanum lycopersicum	28.92	3.00e-63	234.00
IUUC-Sar-113381	Sorex araneus	33.13	7.00e-47	180.00
IUUC-Sbi-114849	Sorghum bicolor	28.66	1.00e-66	245.00
IUUC-Sre-114945	Sporisorium reilianum	34.35	7.00e-60	224.00
IUUC-Ssc-115582	Sus scrofa	34.19	3.00e-59	221.00
IUUC-Tgu-116899	Taeniopygia guttata	28.45	4.00e-69	254.00
IUUC-Tru-118011	Takifugu rubripes	36.39	4.00e-60	224.00
IUUC-Tsy-119622	Tarsius syrichta	25.31	2.00e-26	112.00
IUUC-Tni-120598	Tetraodon nigroviridis	36.99	2.00e-60	225.00
IUUC-Tca-121247	Theobroma cacao	34.21	4.00e-53	201.00
IUUC-Tre-121949	Trichoderma reesei	64.15	0.00e+00	822.00
IUUC-Tvi-122626	Trichoderma virens	59.25	0.00e+00	910.00
IUUC-Tae-125816	Triticum aestivum	33.89	4.00e-45	174.00
IUUC-Tur-126316	Triticum urartu	40.34	6.00e-39	154.00
IUUC-Tme-126904	Tuber melanosporum	37.99	2.00e-120	425.00
IUUC-Tbe-127254	Tupaia belangeri	31.81	6.00e-45	174.00
IUUC-Ttr-128544	Tursiops truncatus	28.18	1.00e-66	246.00
IUUC-Uma-129379	Ustilago maydis	34.07	1.00e-59	223.00
IUUC-Vda-129761	Verticillium dahliae	65.76	0.00e+00	840.00
IUUC-Vpa-130485	Vicugna pacos	28.18	1.00e-66	246.00
IUUC-Vvi-131171	Vitis vinifera	27.07	6.00e-69	253.00
IUUC-Xtr-132762	Xenopus tropicalis	26.31	2.00e-51	196.00
IUUC-Xma-133583	Xiphophorus maculatus	37.64	1.00e-62	233.00
IUUC-Yli-134446	Yarrowia lipolytica	34.34	3.00e-108	384.00
IUUC-Zma-135722	Zea mays	33.53	7.00e-46	177.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence