iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049402

Ensembl Protein ID

CAY70500

UniProt Accession

C4R4L4; C4R4L4_KOMPG

Genbank Protein ID

CAY70500.1

Protein Name

Subunit (90 kDa) of TFIID and SAGA complexes

Genbank Nucleotide ID

FN392321

Gene Name

PAS_chr3_0453

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr3_0453	CAY70500	CAY70500

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-41	135.1	451	488
UBD/Beta-Prp	7.20e-72	240.1	387	716

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v++++f +d ++l+s+s D+t+++W+l+t ++l
   Q: 451  GHSGAVYGVDFsPDnRYLISCSEDKTVRLWSLDTYTCL 488
           8***********998****************9987665 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....................lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           ++  + +tc+kf +d++++a+g++d+ ik+w+++   l                      r+l gh+++v+ v+fspd  +l+++seD+t+++w+l+t++c
   Q: 387  HNTNNDLTCLKFNDDSTMVASGFQDSFIKLWSIDGSPLrsllkndpynqqnndgvavkgSRRLVGHSGAVYGVDFSPDNRYLISCSEDKTVRLWSLDTYTC 487
           5566679****************************999*************************************************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls 187
           ++++kgh++sv++++fsp g++++++shd+t+r+w  ++ + l+ +++gh   v cv++hp++ +l++Gs D+t r+Wd+++g+++r + g h +++++l+
   Q: 488  LVSYKGHSSSVWDVKFSPMGHYFATASHDQTARLWSCDHIYPLR-IFAGHLNDVDCVEFHPNSTYLFTGSSDKTARMWDIARGECVRVFMG-HSGAINCLA 586
           ********************************************.*********************************************9.********* PP
   S: 188  fdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn....................... 264
           ++++g+ l+s+++d+ v lwd++tg+ +++++gh  + ++s++fs++++ lvs+++D+s+r+Wd++++++  + q +                        
   Q: 587  VSPDGRWLASAGEDSVVCLWDISTGRRIKAMRGHGrSSIYSLAFSREGTVLVSTGADNSVRVWDVKKNTNSPSAQPEPindvtaqgiqkktedlrrrkeiv 687
           *********************************96489**************************9998877766655566777777777777777776666 PP
   S: 265  ..........ssvisvavlsfgdnvlvlg 283
                     ++ ++v +++f++++l+l+
   Q: 688  atndhmsvyfTKKTPVYTVHFTRRNLCLA 716
           66666666666666666666666666655 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MKQEPGDSSD KSAPSGSITP QPKPPQQANV SNQQPQKPQQ FSAADLNRIV LEYLNKKGYH 60
KTESMLRMES SHIPAPPTNI PTPQTTNISR PTAPGRAPEY SDDPATIKRG YSILKSWCES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCAAG AGCCTGGGGA TTCAAGTGAT AAGTCCGCTC CGTCTGGGTC AATCACTCCA 60
CAGCCGAAGC CTCCGCAACA GGCTAATGTA TCAAACCAGC AGCCACAAAA GCCCCAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000124--C:SAGA complex
GO:0046695--C:SLIK (SAGA-like) complex
GO:0005669--C:transcription factor TFIID complex
GO:0003682--F:chromatin binding
GO:0016573--P:histone acetylation
GO:0006366--P:transcription from RNA polymerase II promoter

KEGG

ppa:PAS_chr3_0453

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	42.17	2.00e-69	255.00
IUUC-Aml-001607	Ailuropoda melanoleuca	36.94	3.00e-113	400.00
IUUC-Atr-003136	Amborella trichopoda	35.92	1.00e-117	414.00
IUUC-Apl-004193	Anas platyrhynchos	36.77	1.00e-112	398.00
IUUC-Aca-004522	Anolis carolinensis	36.61	3.00e-113	400.00
IUUC-Aly-006476	Arabidopsis lyrata	36.21	8.00e-113	399.00
IUUC-Ath-006587	Arabidopsis thaliana	35.72	7.00e-112	395.00
IUUC-Ago-007736	Ashbya gossypii	61.76	1.00e-149	521.00
IUUC-Acl-008092	Aspergillus clavatus	36.54	5.00e-138	482.00
IUUC-Afl-008659	Aspergillus flavus	37.77	5.00e-140	489.00
IUUC-Afu-008902	Aspergillus fumigatus	37.50	5.00e-138	482.00
IUUC-Ani-009462	Aspergillus nidulans	36.67	2.00e-112	397.00
IUUC-Ang-009841	Aspergillus niger	33.79	2.00e-39	155.00
IUUC-Aor-010083	Aspergillus oryzae	37.77	6.00e-140	489.00
IUUC-Ate-010271	Aspergillus terreus	37.66	6.00e-139	485.00
IUUC-Ame-010721	Astyanax mexicanus	37.42	9.00e-116	408.00
IUUC-Bgr-012257	Blumeria graminis	35.99	4.00e-119	419.00
IUUC-Bta-013539	Bos taurus	36.94	3.00e-113	400.00
IUUC-Bci-013737	Botrytis cinerea	35.21	4.00e-125	439.00
IUUC-Bdi-015041	Brachypodium distachyon	35.44	7.00e-101	359.00
IUUC-Bol-016198	Brassica oleracea	35.99	2.00e-115	407.00
IUUC-Bra-017660	Brassica rapa	36.03	7.00e-115	405.00
IUUC-Cel-018451	Caenorhabditis elegans	29.46	2.00e-64	238.00
IUUC-Cja-018881	Callithrix jacchus	36.94	5.00e-113	400.00
IUUC-Cfa-020056	Canis familiaris	36.87	2.00e-113	400.00
IUUC-Cpo-021454	Cavia porcellus	36.69	4.00e-112	396.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	34.89	8.00e-49	186.00
IUUC-Csa-023045	Chlorocebus sabaeus	37.10	1.00e-111	394.00
IUUC-Cho-024638	Choloepus hoffmanni	39.95	5.00e-72	263.00
IUUC-Cin-025457	Ciona intestinalis	51.27	2.00e-75	273.00
IUUC-Csv-025882	Ciona savignyi	44.33	7.00e-92	329.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	33.16	2.00e-112	397.00
IUUC-Cne-026876	Cryptococcus neoformans	34.65	4.00e-95	340.00
IUUC-Cme-027302	Cyanidioschyzon merolae	39.40	2.00e-73	268.00
IUUC-Dre-027980	Danio rerio	37.31	3.00e-119	420.00
IUUC-Dno-028863	Dasypus novemcinctus	37.10	2.00e-113	401.00
IUUC-Dor-030561	Dipodomys ordii	36.94	4.00e-113	400.00
IUUC-Dse-031547	Dothistroma septosporum	36.96	4.00e-123	433.00
IUUC-Dme-031917	Drosophila melanogaster	39.59	6.00e-82	296.00
IUUC-Ete-032712	Echinops telfairi	38.97	2.00e-70	258.00
IUUC-Eca-033927	Equus caballus	36.94	1.00e-113	401.00
IUUC-Eeu-034449	Erinaceus europaeus	36.90	2.00e-91	328.00
IUUC-Fca-036325	Felis catus	36.07	1.00e-113	401.00
IUUC-Fal-036604	Ficedula albicollis	36.81	5.00e-113	399.00
IUUC-Fox-038049	Fusarium oxysporum	29.88	5.00e-92	330.00
IUUC-Fso-038302	Fusarium solani	31.97	1.00e-101	362.00
IUUC-Gmo-038832	Gadus morhua	42.53	1.00e-94	338.00
IUUC-Ggr-039878	Gaeumannomyces graminis	35.54	2.00e-110	391.00
IUUC-Gga-041147	Gallus gallus	37.08	2.00e-115	407.00
IUUC-Gac-041373	Gasterosteus aculeatus	44.56	2.00e-97	348.00
IUUC-Gma-043230	Glycine max	36.64	1.00e-117	415.00
IUUC-Ggo-044568	Gorilla gorilla	38.97	2.00e-70	257.00
IUUC-Hsa-045971	Homo sapiens	36.94	4.00e-113	400.00
IUUC-Hvu-047695	Hordeum vulgare	45.27	1.00e-77	281.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	36.94	2.00e-113	400.00
IUUC-Lch-049526	Latimeria chalumnae	43.54	2.00e-90	324.00
IUUC-Lpe-051560	Leersia perrieri	43.01	2.00e-81	294.00
IUUC-Loc-052882	Lepisosteus oculatus	37.56	4.00e-116	410.00
IUUC-Lma-053212	Leptosphaeria maculans	38.90	1.00e-117	415.00
IUUC-Laf-053859	Loxodonta africana	37.10	9.00e-114	402.00
IUUC-Mcc-054957	Macaca mulatta	43.80	1.00e-94	338.00
IUUC-Meu-056182	Macropus eugenii	39.63	2.00e-70	257.00
IUUC-Mor-057024	Magnaporthe oryzae	36.27	1.00e-109	388.00
IUUC-Mpo-057520	Magnaporthe poae	35.71	2.00e-104	370.00
IUUC-Mtr-058754	Medicago truncatula	37.13	5.00e-120	422.00
IUUC-Mla-058881	Melampsora laricipopulina	32.08	2.00e-117	414.00
IUUC-Mga-059776	Meleagris gallopavo	37.28	1.00e-115	408.00
IUUC-Mvi-060208	Microbotryum violaceum	35.72	1.00e-114	405.00
IUUC-Mmr-061783	Microcebus murinus	43.80	1.00e-94	338.00
IUUC-Mdo-062856	Monodelphis domestica	37.08	3.00e-114	403.00
IUUC-Mmu-064218	Mus musculus	36.01	8.00e-114	402.00
IUUC-Mac-064886	Musa acuminata	47.44	4.00e-67	247.00
IUUC-Mpu-065735	Mustela putorius furo	36.94	3.00e-113	400.00
IUUC-Mlu-067544	Myotis lucifugus	36.88	1.00e-111	394.00
IUUC-Nfi-068502	Neosartorya fischeri	37.36	3.00e-137	480.00
IUUC-Ncr-068891	Neurospora crassa	34.84	1.00e-112	398.00
IUUC-Nle-069389	Nomascus leucogenys	36.94	3.00e-113	400.00
IUUC-Opr-071042	Ochotona princeps	40.41	6.00e-81	293.00
IUUC-Ont-071455	Oreochromis niloticus	44.81	8.00e-99	352.00
IUUC-Oan-073181	Ornithorhynchus anatinus	37.08	5.00e-113	399.00
IUUC-Ocu-073758	Oryctolagus cuniculus	36.78	4.00e-114	403.00
IUUC-Oba-075739	Oryza barthii	42.63	6.00e-73	266.00
IUUC-Obr-076111	Oryza brachyantha	42.64	3.00e-86	310.00
IUUC-Ogl-077914	Oryza glaberrima	41.90	6.00e-75	273.00
IUUC-Ogu-078057	Oryza glumaepatula	40.11	1.00e-64	238.00
IUUC-Oin-079473	Oryza indica	43.24	9.00e-78	282.00
IUUC-Olo-080645	Oryza longistaminata	49.58	6.00e-65	239.00
IUUC-Ome-081831	Oryza meridionalis	40.21	1.00e-63	235.00
IUUC-Oni-082441	Oryza nivara	40.91	5.00e-66	243.00
IUUC-Opu-083325	Oryza punctata	36.31	2.00e-93	334.00
IUUC-Oru-085131	Oryza rufipogon	40.91	6.00e-66	243.00
IUUC-Osa-086189	Oryza sativa	43.24	9.00e-78	282.00
IUUC-Ola-086574	Oryzias latipes	38.07	1.00e-120	424.00
IUUC-Olu-087616	Ostreococcus lucimarinus	32.81	4.00e-95	339.00
IUUC-Oga-088827	Otolemur garnettii	36.94	5.00e-113	399.00
IUUC-Oar-089648	Ovis aries	36.94	4.00e-113	400.00
IUUC-Ptr-091195	Pan troglodytes	36.07	1.00e-113	402.00
IUUC-Pan-091978	Papio anubis	36.87	4.00e-113	400.00
IUUC-Psi-093598	Pelodiscus sinensis	36.97	8.00e-105	372.00
IUUC-Pma-094593	Petromyzon marinus	41.94	3.00e-63	233.00
IUUC-Pno-094823	Phaeosphaeria nodorum	40.59	3.00e-124	436.00
IUUC-Ppa-095455	Physcomitrella patens	34.13	1.00e-106	378.00
IUUC-Pfo-097120	Poecilia formosa	45.32	1.00e-98	352.00
IUUC-Pab-098771	Pongo abelii	36.94	3.00e-113	400.00
IUUC-Pop-099134	Populus trichocarpa	43.67	3.00e-89	320.00
IUUC-Pca-100727	Procavia capensis	38.46	3.00e-69	253.00
IUUC-Ppe-101686	Prunus persica	34.96	1.00e-114	405.00
IUUC-Pva-102414	Pteropus vampyrus	33.13	1.00e-94	338.00
IUUC-Pgr-103603	Puccinia graminis	34.07	1.00e-109	388.00
IUUC-Ptt-103995	Puccinia triticina	30.96	2.00e-85	308.00
IUUC-Pte-104359	Pyrenophora teres	39.69	3.00e-129	453.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	39.91	1.00e-128	451.00
IUUC-Rno-105064	Rattus norvegicus	36.16	3.00e-114	404.00
IUUC-Sce-106186	Saccharomyces cerevisiae	47.38	0.00e+00	676.00
IUUC-Sha-106582	Sarcophilus harrisii	37.03	7.00e-113	399.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	45.21	8.00e-172	594.00
IUUC-Spo-108142	Schizosaccharomyces pombe	45.20	1.00e-170	590.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	35.52	4.00e-122	429.00
IUUC-Smo-109111	Selaginella moellendorffii	37.80	4.00e-113	399.00
IUUC-Sit-109804	Setaria italica	36.43	2.00e-107	380.00
IUUC-Sly-111693	Solanum lycopersicum	35.79	7.00e-111	392.00
IUUC-Sar-113381	Sorex araneus	39.26	1.00e-75	275.00
IUUC-Sbi-114849	Sorghum bicolor	35.87	3.00e-105	373.00
IUUC-Sre-114945	Sporisorium reilianum	43.51	2.00e-97	348.00
IUUC-Ssc-115582	Sus scrofa	42.89	2.00e-92	330.00
IUUC-Tgu-116899	Taeniopygia guttata	37.08	9.00e-115	405.00
IUUC-Tru-118011	Takifugu rubripes	44.30	9.00e-97	345.00
IUUC-Tsy-119622	Tarsius syrichta	35.29	7.00e-47	179.00
IUUC-Tni-120598	Tetraodon nigroviridis	43.83	3.00e-95	340.00
IUUC-Tca-121247	Theobroma cacao	35.01	2.00e-118	417.00
IUUC-Tre-121949	Trichoderma reesei	32.17	8.00e-103	365.00
IUUC-Tvi-122626	Trichoderma virens	30.92	9.00e-108	382.00
IUUC-Tae-123335	Triticum aestivum	45.85	5.00e-79	286.00
IUUC-Tur-126051	Triticum urartu	41.86	9.00e-73	265.00
IUUC-Tme-126904	Tuber melanosporum	44.27	5.00e-168	582.00
IUUC-Tbe-127254	Tupaia belangeri	33.60	1.00e-93	335.00
IUUC-Ttr-128544	Tursiops truncatus	36.07	2.00e-113	401.00
IUUC-Uma-129379	Ustilago maydis	45.01	4.00e-100	357.00
IUUC-Vda-129761	Verticillium dahliae	31.72	3.00e-96	343.00
IUUC-Vpa-130485	Vicugna pacos	36.07	1.00e-113	401.00
IUUC-Vvi-131171	Vitis vinifera	34.10	6.00e-119	419.00
IUUC-Xtr-132241	Xenopus tropicalis	39.94	3.00e-69	254.00
IUUC-Xma-133583	Xiphophorus maculatus	45.32	7.00e-99	352.00
IUUC-Yli-134446	Yarrowia lipolytica	51.43	0.00e+00	759.00
IUUC-Zma-135722	Zea mays	35.58	3.00e-104	370.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence