iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095455

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

TFIID and SAGA complex subunit

Genbank Nucleotide ID

DS545007

Gene Name

TAFV1501; PHYPADRAFT_215697

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S118_112V6	PP1S118_112V6.1	PP1S118_112V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-38	128.4	499	537
UBD/Beta-Prp	4.50e-65	220.5	341	660

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v cl++  +++++++G+ D+t+++WD+ tg +l+
   Q: 499  GHMSDVDCLQWhvNCNYVATGGTDNTVRLWDVQTGECLR 537
           8***********766**********************97 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl................................lrslsgheaevtavkfspdgkil 67
           ++h++  ++c  +s d+ l+a g+ d+++kvwd+ +                                    + l+gh ++v+a +fspd+++l
   Q: 341  NTHNS--LNCASISSDGALVAGGFSDSSVKVWDMAKLGEqktiagsvtqdkpptngftetretalegskssYALLQGHAGPVYAASFSPDSEFL 432
           45555..77778888******************998444778999999999999999999999999999988888999999************* PP
   S: 68   vtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtv 161
           +t+s D t+++w+++  + ++ +kgh++ v+++++sp g++++++shdrt+r+w +e  q l+ +l gh++ v c+++h ++n++++G++D+tv
   Q: 433  LTSSADCTVRLWSMRLKTNLMGYKGHNFPVWDVQYSPVGHYFATASHDRTARIWCMERMQPLR-ILVGHMSDVDCLQWHVNCNYVATGGTDNTV 525
           ***************************************************************.****************************** PP
   S: 162  rlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW...... 249
           rlWd++tg++lr + g h + v sl+++s+g++++sg++ g + +wdl +g+cv  l ght+ v+ ++fs ++ +l+sgs+D+++r+W      
   Q: 526  RLWDVQTGECLRVFNG-HCGTVLSLAMSSDGRYMASGDDRGAIFMWDLGSGQCVAPLMGHTSCVWTLAFSGEGSLLASGSADNTVRLWdvnass 618
           ***************9.***********************************************************************554432 PP
   S: 250  .dlrsgdllktlqlhn.............ssvisvavlsfgdnvlvlgs 284
             +rs     +                  +++++v +l+f++ +l+l++
   Q: 619  kGSRSE---EK----LsatrhlrllktlpTKSTPVYALKFSRTNLLLAA 660
           222222...33....2333367799999999999999999988887765 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEEEKVEQAV LAYLKSKGYR QAELAFHDEQ QRLRHSGSQT SDTAIDSSIA NPILFYAKSD 60
NDPNRYKEGY SKLRSWVYQS LDSYKNELLR ILYPVFAHCY IDLVGKGFTQ EARDFLQRFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTGGGCTCT CAGTTGCGAA GGAAGGATTG CCGGGACGGG ACCCTCACCA CCAATTTTGC 60
AGCTTCAGGT GAGTTCGTGC CCTTCTCATC AAGCCCATCT TTCCTCTTTC TGTGGCCGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_215697

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	52.21	3.00e-166	578.00
IUUC-Aml-001607	Ailuropoda melanoleuca	38.70	5.00e-120	424.00
IUUC-Atr-003136	Amborella trichopoda	59.56	0.00e+00	802.00
IUUC-Apl-004193	Anas platyrhynchos	37.30	1.00e-113	402.00
IUUC-Aca-004522	Anolis carolinensis	36.35	3.00e-120	425.00
IUUC-Aly-006476	Arabidopsis lyrata	55.24	0.00e+00	725.00
IUUC-Ath-006587	Arabidopsis thaliana	54.66	0.00e+00	741.00
IUUC-Ago-007736	Ashbya gossypii	31.81	3.00e-106	378.00
IUUC-Acl-008092	Aspergillus clavatus	29.77	7.00e-94	337.00
IUUC-Afl-008659	Aspergillus flavus	29.88	8.00e-94	337.00
IUUC-Afu-008902	Aspergillus fumigatus	29.29	2.00e-79	289.00
IUUC-Ani-009462	Aspergillus nidulans	30.70	4.00e-81	295.00
IUUC-Aor-010083	Aspergillus oryzae	29.88	8.00e-94	337.00
IUUC-Ate-010271	Aspergillus terreus	29.96	9.00e-93	333.00
IUUC-Ame-010721	Astyanax mexicanus	36.85	1.00e-114	406.00
IUUC-Bgr-012257	Blumeria graminis	28.16	7.00e-76	277.00
IUUC-Bta-013539	Bos taurus	38.70	3.00e-120	425.00
IUUC-Bci-013737	Botrytis cinerea	28.28	4.00e-86	311.00
IUUC-Bdi-015041	Brachypodium distachyon	55.12	0.00e+00	655.00
IUUC-Bol-015483	Brassica oleracea	55.15	0.00e+00	746.00
IUUC-Bra-017147	Brassica rapa	55.44	0.00e+00	749.00
IUUC-Cel-018451	Caenorhabditis elegans	28.26	2.00e-58	219.00
IUUC-Cja-018881	Callithrix jacchus	38.54	1.00e-119	423.00
IUUC-Cfa-020056	Canis familiaris	38.70	4.00e-120	424.00
IUUC-Cpo-021454	Cavia porcellus	37.38	3.00e-121	428.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	40.83	6.00e-64	237.00
IUUC-Csa-023045	Chlorocebus sabaeus	38.46	4.00e-118	417.00
IUUC-Cho-024284	Choloepus hoffmanni	47.35	5.00e-78	284.00
IUUC-Cin-025457	Ciona intestinalis	50.00	4.00e-71	260.00
IUUC-Csv-025882	Ciona savignyi	40.15	4.00e-74	271.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.08	4.00e-74	272.00
IUUC-Cne-026876	Cryptococcus neoformans	30.62	8.00e-78	284.00
IUUC-Cme-027302	Cyanidioschyzon merolae	36.63	7.00e-114	404.00
IUUC-Dre-027980	Danio rerio	45.17	6.00e-99	354.00
IUUC-Dno-028863	Dasypus novemcinctus	38.54	2.00e-119	422.00
IUUC-Dor-030561	Dipodomys ordii	38.54	1.00e-119	423.00
IUUC-Dse-031547	Dothistroma septosporum	31.29	2.00e-94	339.00
IUUC-Dme-032031	Drosophila melanogaster	32.96	2.00e-51	196.00
IUUC-Ete-032712	Echinops telfairi	38.98	2.00e-73	269.00
IUUC-Eca-033927	Equus caballus	37.40	4.00e-121	427.00
IUUC-Eeu-034449	Erinaceus europaeus	36.92	2.00e-96	345.00
IUUC-Fca-036325	Felis catus	38.70	5.00e-120	424.00
IUUC-Fal-036604	Ficedula albicollis	45.45	8.00e-99	354.00
IUUC-Fox-038049	Fusarium oxysporum	33.71	8.00e-46	177.00
IUUC-Fso-038302	Fusarium solani	28.77	2.00e-68	253.00
IUUC-Gmo-038832	Gadus morhua	42.67	5.00e-96	344.00
IUUC-Ggr-039878	Gaeumannomyces graminis	29.73	5.00e-75	275.00
IUUC-Gga-041147	Gallus gallus	38.60	1.00e-120	426.00
IUUC-Gac-041373	Gasterosteus aculeatus	44.53	2.00e-97	349.00
IUUC-Gma-043230	Glycine max	57.84	0.00e+00	786.00
IUUC-Ggo-044568	Gorilla gorilla	37.41	4.00e-74	271.00
IUUC-Hsa-045971	Homo sapiens	38.54	1.00e-119	423.00
IUUC-Hvu-047695	Hordeum vulgare	56.80	3.00e-146	510.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	38.54	1.00e-119	423.00
IUUC-Kpa-049402	Komagataella pastoris	35.44	6.00e-110	390.00
IUUC-Lch-049526	Latimeria chalumnae	43.75	1.00e-93	336.00
IUUC-Lpe-051560	Leersia perrieri	53.90	0.00e+00	683.00
IUUC-Loc-052882	Lepisosteus oculatus	36.47	4.00e-113	401.00
IUUC-Lma-053212	Leptosphaeria maculans	29.99	3.00e-76	278.00
IUUC-Laf-053859	Loxodonta africana	38.70	1.00e-119	423.00
IUUC-Mcc-054957	Macaca mulatta	39.36	7.00e-102	363.00
IUUC-Meu-056182	Macropus eugenii	39.52	4.00e-73	268.00
IUUC-Mor-057024	Magnaporthe oryzae	29.19	1.00e-69	257.00
IUUC-Mpo-057520	Magnaporthe poae	29.77	8.00e-72	264.00
IUUC-Mtr-058754	Medicago truncatula	58.11	0.00e+00	796.00
IUUC-Mla-058881	Melampsora laricipopulina	38.15	4.00e-77	281.00
IUUC-Mga-059776	Meleagris gallopavo	38.60	2.00e-120	425.00
IUUC-Mvi-060208	Microbotryum violaceum	33.89	4.00e-95	342.00
IUUC-Mmr-061783	Microcebus murinus	39.36	7.00e-102	363.00
IUUC-Mdo-062856	Monodelphis domestica	38.86	3.00e-120	425.00
IUUC-Mmu-064218	Mus musculus	38.54	1.00e-119	423.00
IUUC-Mac-064886	Musa acuminata	71.09	5.00e-104	371.00
IUUC-Mpu-065735	Mustela putorius furo	38.70	6.00e-120	424.00
IUUC-Mlu-067544	Myotis lucifugus	38.64	1.00e-118	419.00
IUUC-Nfi-068502	Neosartorya fischeri	29.89	1.00e-93	337.00
IUUC-Ncr-068891	Neurospora crassa	28.64	8.00e-73	267.00
IUUC-Nle-069389	Nomascus leucogenys	38.54	1.00e-119	423.00
IUUC-Opr-071042	Ochotona princeps	41.71	4.00e-86	311.00
IUUC-Ont-071455	Oreochromis niloticus	46.28	4.00e-100	358.00
IUUC-Oan-073181	Ornithorhynchus anatinus	38.86	2.00e-119	422.00
IUUC-Ocu-073758	Oryctolagus cuniculus	38.19	1.00e-120	426.00
IUUC-Oba-075739	Oryza barthii	52.70	1.00e-178	619.00
IUUC-Obr-076111	Oryza brachyantha	57.72	0.00e+00	735.00
IUUC-Ogl-077914	Oryza glaberrima	55.16	0.00e+00	686.00
IUUC-Ogu-078057	Oryza glumaepatula	49.93	2.00e-165	575.00
IUUC-Oin-079473	Oryza indica	56.16	0.00e+00	694.00
IUUC-Olo-080557	Oryza longistaminata	47.01	2.00e-148	518.00
IUUC-Ome-081831	Oryza meridionalis	50.00	9.00e-165	572.00
IUUC-Oni-082441	Oryza nivara	50.75	3.00e-166	578.00
IUUC-Opu-083239	Oryza punctata	48.25	8.00e-165	573.00
IUUC-Oru-085131	Oryza rufipogon	50.60	2.00e-166	578.00
IUUC-Osa-086189	Oryza sativa	56.01	0.00e+00	692.00
IUUC-Ola-086574	Oryzias latipes	45.17	9.00e-98	350.00
IUUC-Olu-087616	Ostreococcus lucimarinus	39.34	3.00e-123	434.00
IUUC-Oga-088827	Otolemur garnettii	38.54	9.00e-120	423.00
IUUC-Oar-089648	Ovis aries	38.70	3.00e-120	425.00
IUUC-Ptr-091195	Pan troglodytes	38.54	1.00e-119	423.00
IUUC-Pan-091978	Papio anubis	38.54	9.00e-120	423.00
IUUC-Psi-093598	Pelodiscus sinensis	37.07	9.00e-108	383.00
IUUC-Pma-094593	Petromyzon marinus	41.48	8.00e-58	217.00
IUUC-Pno-094823	Phaeosphaeria nodorum	32.48	5.00e-85	308.00
IUUC-Pfo-097120	Poecilia formosa	45.57	1.00e-100	360.00
IUUC-Pab-098771	Pongo abelii	38.54	1.00e-119	423.00
IUUC-Pop-099134	Populus trichocarpa	56.26	0.00e+00	748.00
IUUC-Pca-100727	Procavia capensis	39.25	8.00e-73	267.00
IUUC-Ppe-101686	Prunus persica	58.53	0.00e+00	779.00
IUUC-Pva-102414	Pteropus vampyrus	35.12	4.00e-97	348.00
IUUC-Pgr-103603	Puccinia graminis	31.45	8.00e-87	314.00
IUUC-Ptt-103995	Puccinia triticina	30.09	3.00e-71	263.00
IUUC-Pte-104359	Pyrenophora teres	31.01	3.00e-85	309.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	30.77	8.00e-84	304.00
IUUC-Rno-105064	Rattus norvegicus	38.54	2.00e-119	422.00
IUUC-Sce-106186	Saccharomyces cerevisiae	31.93	1.00e-100	360.00
IUUC-Sha-107009	Sarcophilus harrisii	36.27	1.00e-93	336.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	35.64	6.00e-110	390.00
IUUC-Spo-108142	Schizosaccharomyces pombe	33.87	3.00e-110	391.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	27.52	1.00e-79	290.00
IUUC-Smo-109097	Selaginella moellendorffii	60.88	0.00e+00	733.00
IUUC-Sit-109804	Setaria italica	57.72	0.00e+00	742.00
IUUC-Sly-111693	Solanum lycopersicum	57.06	0.00e+00	764.00
IUUC-Sar-113381	Sorex araneus	37.91	5.00e-78	284.00
IUUC-Sbi-114849	Sorghum bicolor	57.16	0.00e+00	725.00
IUUC-Sre-114945	Sporisorium reilianum	41.21	4.00e-68	252.00
IUUC-Ssc-115582	Sus scrofa	45.13	2.00e-97	348.00
IUUC-Tgu-116899	Taeniopygia guttata	45.43	6.00e-100	357.00
IUUC-Tru-118011	Takifugu rubripes	45.57	4.00e-100	358.00
IUUC-Tsy-119622	Tarsius syrichta	32.73	8.00e-50	191.00
IUUC-Tni-120598	Tetraodon nigroviridis	45.34	7.00e-101	360.00
IUUC-Tca-121247	Theobroma cacao	57.19	0.00e+00	775.00
IUUC-Tre-121949	Trichoderma reesei	34.35	1.00e-59	223.00
IUUC-Tvi-122626	Trichoderma virens	32.06	7.00e-58	218.00
IUUC-Tae-123335	Triticum aestivum	55.27	0.00e+00	675.00
IUUC-Tur-126005	Triticum urartu	48.94	1.00e-174	605.00
IUUC-Tme-126904	Tuber melanosporum	31.54	3.00e-102	365.00
IUUC-Tbe-127254	Tupaia belangeri	34.80	5.00e-98	351.00
IUUC-Ttr-128544	Tursiops truncatus	38.54	1.00e-119	423.00
IUUC-Uma-129379	Ustilago maydis	35.92	3.00e-67	249.00
IUUC-Vda-129761	Verticillium dahliae	27.11	3.00e-62	232.00
IUUC-Vpa-130485	Vicugna pacos	38.70	5.00e-120	424.00
IUUC-Vvi-131171	Vitis vinifera	60.23	0.00e+00	806.00
IUUC-Xtr-132762	Xenopus tropicalis	32.85	6.00e-93	334.00
IUUC-Xma-133583	Xiphophorus maculatus	45.05	1.00e-99	356.00
IUUC-Yli-134446	Yarrowia lipolytica	39.29	4.00e-121	427.00
IUUC-Zma-135722	Zea mays	56.41	0.00e+00	727.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence