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Tag Content
iUUCD ID IUUC-Pop-099493
Ensembl Protein ID POPTR_0009s11520.1
UniProt Accession B9HRR9; B9HRR9_POPTR
Genbank Protein ID EEE87020.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000345
Gene Name POPTRDRAFT_722113; POPTR_0009s11520g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0009s11520 POPTR_0009s11520.1 POPTR_0009s11520.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.80e-24 85.3 188 219
UBD/Beta-Prp 3.10e-42 145.9 8 217
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.fsdtl.lvsGsdDgtikvWDlr 31
    gH+d v++la + +l ++s+s+Dg+i++W l+
   Q: 188 GHSDTVRGLAeMH-GLgILSASHDGSIRLWALT 219
    8********9343.3359************987 PP
   


   UBD/Beta-Prp

   S: 40   ttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw.....dlstgkcvhtlkghedsvlslsfsp.....sgdklvsGshdrtirv 120
    ++ +l ++l ghe+ v+ ++ ++ ++t+s+D+t++ w d ++++ +l gh++ v l++ p +vsG+ d ++ v
   Q: 8 KNYQLSQELRGHEDDVRGICVCGNA-GIATSSRDKTVRYWvpdptDKRKYESSKILLGHSSFVGPLAWIPpnqdfVEGAIVSGGMDTMVLV 97
    55568899****************9.7*************9976666699********************9554334679*********** PP
   S: 121 wdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
    w+l++g++++ l+gh+ v++vv+++ +vs+s D t+r W + g+l++ ++ h+++++ ++ ++g elv+gs+d+t+klw
   Q: 98 WNLSNGEKVQ-SLKGHHLQVTGVVLDG--EDIVSCSVDCTLRRW--RKGQLVENWEA-HKSAIQAIIKLPSG-ELVTGSTDTTLKLWKG-- 179
    **********.****************..77*************..88*******98.************76.9*************87.. PP
   S: 212 gecvrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
    ++c++t+ gh+d+v+ ++ ++ ++s+s+Dgsir+W
   Q: 180 KTCLHTFAGHSDTVRGLAEM-HGLGILSASHDGSIRLWA 217
    789**************999.9****************5 PP
   

Organism Populus trichocarpa
Protein Sequence
(Fasta)
MDMEIDFKNY QLSQELRGHE DDVRGICVCG NAGIATSSRD KTVRYWVPDP TDKRKYESSK 60
ILLGHSSFVG PLAWIPPNQD FVEGAIVSGG MDTMVLVWNL SNGEKVQSLK GHHLQVTGVV 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pop-099493|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACTTGTAAAC TAAAAACAAT CACTCTCCCC TCTCACTCAA AGGTCTCTCA AAATCATGGA 60
CATGGAAATC GACTTCAAAA ATTATCAACT AAGCCAAGAA CTCCGCGGCC ACGAAGACGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pop-099493|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51394--PFU
PS51396--PUL
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010992--P:ubiquitin homeostasis

KEGG pop:POPTR_0009s11520g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005961 Arabidopsis lyrata 71.11 0.00e+00 1106.00
IUUC-Ath-006639 Arabidopsis thaliana 70.26 0.00e+00 1068.00
IUUC-Bol-016006 Brassica oleracea 70.45 0.00e+00 1086.00
IUUC-Bra-017593 Brassica rapa 71.37 0.00e+00 1099.00
IUUC-Cgl-026711 Colletotrichum gloeosporioides 28.90 6.00e-71 261.00
IUUC-Dme-032044 Drosophila melanogaster 30.40 1.00e-79 290.00
IUUC-Fso-038251 Fusarium solani 29.87 1.00e-79 290.00
IUUC-Gma-043067 Glycine max 76.52 0.00e+00 1167.00
IUUC-Kpa-049134 Komagataella pastoris 29.53 2.00e-74 273.00
IUUC-Mpo-057465 Magnaporthe poae 28.89 2.00e-76 280.00
IUUC-Mtr-058374 Medicago truncatula 73.42 0.00e+00 1162.00
IUUC-Mla-058895 Melampsora laricipopulina 34.13 2.00e-61 229.00
IUUC-Mac-064902 Musa acuminata 68.52 0.00e+00 1050.00
IUUC-Oan-073353 Ornithorhynchus anatinus 41.67 1.00e-42 165.00
IUUC-Ppe-101874 Prunus persica 78.89 0.00e+00 1230.00
IUUC-Pgr-103260 Puccinia graminis 33.07 1.00e-75 277.00
IUUC-Sce-106351 Saccharomyces cerevisiae 29.68 2.00e-61 230.00
IUUC-Sja-107687 Schizosaccharomyces japonicus 29.26 7.00e-83 301.00
IUUC-Spo-108093 Schizosaccharomyces pombe 31.35 2.00e-93 336.00
IUUC-Sly-111063 Solanum lycopersicum 72.16 0.00e+00 1098.00
IUUC-Sar-113199 Sorex araneus 38.30 5.00e-68 252.00
IUUC-Tca-120977 Theobroma cacao 75.35 0.00e+00 1173.00
IUUC-Tur-126404 Triticum urartu 43.09 2.00e-77 283.00
IUUC-Vvi-131153 Vitis vinifera 77.18 0.00e+00 1191.00
Created Date 25-Jun-2017

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