iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135362

Ensembl Protein ID

Zm00001d047373_T001

UniProt Accession

C0PFA7; C0PFA7_MAIZE

Genbank Protein ID

ACN33873.1; ACR38657.1; AQL06288.1

Protein Name

Ubiquitin domain-containing protein DSK2b

Genbank Nucleotide ID

BT066976; BT088304; CM000785

Gene Name

ZEAMMB73_Zm00001d047373

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d047373	Zm00001d047373_T007	Zm00001d047373_T007
Zm00001d047373	Zm00001d047373_T001	Zm00001d047373_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.10e-07	32.8	537	571
ULD/UDP/UBQ/UBQ_PIM	2.50e-21	77.4	27	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 6    kleqlveMGF.dreealqaLraannnleaAveyLl 39
           +l ql+eMGF d+ e++qaL a+ +n+ aAve+Ll
   Q: 537  QLTQLQEMGFiDTAENIQALVATAGNVHAAVERLL 571
           789*******************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 2    kltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvv 71
           +l++++ +g++f+++ +   tv ++Ke ++ ++gvp+ qq+LIy+G+iLkD++tL ++g+++++++hlv 
   Q: 27   TLHIRCANGSKFTVQTDLGATVGAFKEVLSGSCGVPAPQQRLIYKGRILKDEQTLDSYGVETDHTIHLVR 96
           699*****************************************************************95 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MASGGEGAGS GESPPAASVE AAAVEATLHI RCANGSKFTV QTDLGATVGA FKEVLSGSCG 60
VPAPQQRLIY KGRILKDEQT LDSYGVETDH TIHLVRGVAT PAASSAPAAA NPLASFTPSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTATGCCTT CGCATATGCC TAGAACCTTC CTCATGCCTC TGATGATATG CCACCTCGAC 60
CCCACCGCAC AGAGACACAA GCCTCCACGT CACGCGGCGA ATCCGGGCCG TCCATCACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022634	Chlamydomonas reinhardtii	47.95	5.00e-15	74.70
IUUC-Cme-027155	Cyanidioschyzon merolae	48.94	6.00e-33	135.00
IUUC-Fso-038204	Fusarium solani	25.35	5.00e-11	61.60
IUUC-Gmo-039317	Gadus morhua	34.21	2.00e-45	176.00
IUUC-Ggr-039961	Gaeumannomyces graminis	28.24	2.00e-12	66.20
IUUC-Hvu-047533	Hordeum vulgare	79.78	2.00e-53	201.00
IUUC-Lpe-050974	Leersia perrieri	77.80	7.00e-162	563.00
IUUC-Ola-086802	Oryzias latipes	34.62	2.00e-46	180.00
IUUC-Sce-106332	Saccharomyces cerevisiae	29.00	2.00e-15	75.90
IUUC-Sbi-114273	Sorghum bicolor	92.24	0.00e+00	687.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence