iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095716

Ensembl Protein ID

PP1S25_358V6.1

UniProt Accession

A9RSH6; A9RSH6_PHYPA

Genbank Protein ID

EDQ78305.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544914

Gene Name

PHYPADRAFT_69976

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S25_358V6	PP1S25_358V6.1	PP1S25_358V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-27	94.9	124	162
UBD/Beta-Prp	6.20e-45	154.4	421	676

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGs..dDgtikvWDlrtgvll 36
           H+ +v+c++f ++ ++lvs +   Dg++ +WD+r+g+ll
   Q: 124  HKQGVCCVQFsPNgKHLVSVGvpSDGQVCLWDWRSGTLL 162
           999********777*****8888************9876 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrslsgheae.............................................vtavkfspdgkilvtgseD 73
            +at s+dg+i++w +++g+  ++   + ++                                              ++++ spdg+ l+ g + 
   Q: 421  TFATCSADGSIRLWCLDSGQEKSTANLNAGApptagpvniynkeilgvlyidkrddqkdkvvigasdeepfsslqgFRTICASPDGQHLAAGDRN 515
           599************999988444333333345799999999999999999999999999999999999************************** PP
   S: 74   rtikvwdlstgkcvhtlkghedsvlslsfsp...........sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl 157
           ++++v+dl+t + ++  ++h+ +vlslsf             s   l+sG++dr i+++d+++++ + etl+ h++++++v++ + g+ l s+s+
   Q: 516  GNLRVYDLNTLQLIIFKEAHDGEVLSLSFTSntkdtlveeptSIPLLASGGRDRLINIYDVNSRYDIVETLADHTALITSVKFACCGSKLLSCSA 610
           **************************8888754444444443336778*************************************99******** PP
   S: 158  DrtvrlWdl.......ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
           D+ v + ++       k+ +  ++l+    +s y ++ d+ +k+ v++++d+++ + +l +g++vr l
   Q: 611  DKSVIFRNVlasggrcKFIRYHQELS--PRGSFYDIDTDPFSKHAVAVGQDKKLSVLNLISGKTVRHL 676
           ****9888898776555555555554..699********************************99876 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MPVKRSQTIA MRLLKRKTRK VEGFGKLELE RVIGLTTASQ SGLSCNATTG ELAYLAGAVV 60
VIYNVKANSQ TQFLVAPKTA KAFSCVAYSG QGGRFLAAGE SGHQPGIIIW EVAVGARVAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCTGGTC AGTCTGCATA CTTTCTTGAT CCGAAACCTG CTTCTCAATA CCCCTTGTTG 60
TTGGCTTACA CTTCACGGCC ATCAACATGT GGAGCATGAC TCTTAGTTGC GCAACTCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_69976

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007823	Ashbya gossypii	25.30	4.00e-14	73.20
IUUC-Bci-013828	Botrytis cinerea	23.75	5.00e-17	82.80
IUUC-Cel-018592	Caenorhabditis elegans	27.10	8.00e-59	222.00
IUUC-Cre-022999	Chlamydomonas reinhardtii	33.62	4.00e-24	106.00
IUUC-Cgl-026454	Colletotrichum gloeosporioides	24.23	5.00e-15	76.30
IUUC-Fso-038440	Fusarium solani	23.39	7.00e-25	108.00
IUUC-Ncr-068758	Neurospora crassa	22.78	6.00e-25	109.00
IUUC-Tme-127128	Tuber melanosporum	23.26	7.00e-26	112.00
IUUC-Vda-129957	Verticillium dahliae	27.10	4.00e-17	83.20
IUUC-Vpa-130392	Vicugna pacos	45.57	3.00e-18	86.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence