iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039976

Ensembl Protein ID

GGTG_04315T0

UniProt Accession

J3NSR6; J3NSR6_GAGT3

Genbank Protein ID

EJT79229.1

Protein Name

Small nucleolar ribonucleoprotein complex subunit

Genbank Nucleotide ID

ADBI01000364

Gene Name

GGTG_04315

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_04315	GGTG_04315T0	GGTG_04315T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-06	26.6	296	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H+++v+++a   + +++vs + D  + vWD+r +
   Q: 296  HKGPVRSIAIdREgRYMVSTGQDQRMAVWDIRMF 329
           9*********97789***************8765 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

METDRISSLG SSLKEQPNGA LVVQDARTQL LSKAEQTKIR RHKQAQRIYG RGRQIDVRGI 60
KDKKLRRNLQ TLEDKYKVAA VKAKDAEILH ENTAGFLEAE TELERTYKIR QDEITRDVAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCTAAAAA TTTATTGTTC TGCGCTCCGC GCCGCCGTTG GCAGCTGTGG ATTCGATAGT 60
GAAAATCGAC ACCTCCACCG GCCGCTTGCC CACCCGCCGC TGTTGCTGCG CGCAAACGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000921	Aegilops tauschii	38.45	2.00e-97	348.00
IUUC-Atr-002528	Amborella trichopoda	43.30	7.00e-98	349.00
IUUC-Aly-005663	Arabidopsis lyrata	41.12	3.00e-94	337.00
IUUC-Ath-007405	Arabidopsis thaliana	41.53	5.00e-94	336.00
IUUC-Ang-009764	Aspergillus niger	66.21	0.00e+00	734.00
IUUC-Ame-011572	Astyanax mexicanus	45.18	2.00e-109	387.00
IUUC-Bdi-014459	Brachypodium distachyon	42.62	4.00e-96	343.00
IUUC-Bol-015169	Brassica oleracea	40.93	7.00e-94	337.00
IUUC-Bra-016837	Brassica rapa	39.86	3.00e-92	330.00
IUUC-Cel-018465	Caenorhabditis elegans	39.57	8.00e-104	369.00
IUUC-Cre-022704	Chlamydomonas reinhardtii	42.55	2.00e-122	431.00
IUUC-Cgl-026438	Colletotrichum gloeosporioides	74.51	0.00e+00	827.00
IUUC-Cne-026784	Cryptococcus neoformans	45.67	1.00e-100	358.00
IUUC-Dre-028533	Danio rerio	44.73	5.00e-108	383.00
IUUC-Dse-031280	Dothistroma septosporum	63.26	0.00e+00	710.00
IUUC-Eeu-034982	Erinaceus europaeus	40.82	4.00e-60	223.00
IUUC-Fox-037980	Fusarium oxysporum	72.74	0.00e+00	843.00
IUUC-Fso-038154	Fusarium solani	75.63	0.00e+00	865.00
IUUC-Gmo-039548	Gadus morhua	47.71	9.00e-109	385.00
IUUC-Gac-042249	Gasterosteus aculeatus	46.89	1.00e-106	378.00
IUUC-Gma-043274	Glycine max	39.41	3.00e-100	357.00
IUUC-Hvu-047436	Hordeum vulgare	43.73	9.00e-73	265.00
IUUC-Kpa-049329	Komagataella pastoris	47.58	5.00e-133	466.00
IUUC-Lpe-051501	Leersia perrieri	43.17	1.00e-93	338.00
IUUC-Loc-051736	Lepisosteus oculatus	48.44	2.00e-106	377.00
IUUC-Meu-056419	Macropus eugenii	47.44	3.00e-93	334.00
IUUC-Mor-057146	Magnaporthe oryzae	81.29	0.00e+00	902.00
IUUC-Mpo-057512	Magnaporthe poae	93.15	0.00e+00	1067.00
IUUC-Mtr-058139	Medicago truncatula	42.52	2.00e-99	354.00
IUUC-Mla-059028	Melampsora laricipopulina	44.12	4.00e-114	403.00
IUUC-Mvi-060533	Microbotryum violaceum	45.19	2.00e-120	424.00
IUUC-Mac-065643	Musa acuminata	42.01	1.00e-96	345.00
IUUC-Ont-071977	Oreochromis niloticus	48.40	4.00e-107	380.00
IUUC-Oba-075525	Oryza barthii	40.99	4.00e-97	347.00
IUUC-Obr-076468	Oryza brachyantha	42.14	3.00e-100	357.00
IUUC-Ogl-077395	Oryza glaberrima	40.99	4.00e-97	347.00
IUUC-Ogu-078730	Oryza glumaepatula	40.99	2.00e-96	344.00
IUUC-Oin-079797	Oryza indica	40.99	1.00e-96	345.00
IUUC-Olo-080539	Oryza longistaminata	40.77	3.00e-96	344.00
IUUC-Oni-082635	Oryza nivara	40.99	1.00e-96	345.00
IUUC-Opu-083733	Oryza punctata	42.28	1.00e-96	345.00
IUUC-Oru-084560	Oryza rufipogon	40.99	1.00e-96	345.00
IUUC-Osa-085463	Oryza sativa	40.99	9.00e-97	345.00
IUUC-Ola-086667	Oryzias latipes	47.10	1.00e-114	405.00
IUUC-Olu-087881	Ostreococcus lucimarinus	42.95	3.00e-108	384.00
IUUC-Pma-094742	Petromyzon marinus	42.65	1.00e-95	342.00
IUUC-Ppa-095230	Physcomitrella patens	44.36	2.00e-115	407.00
IUUC-Pop-099756	Populus trichocarpa	41.63	8.00e-98	349.00
IUUC-Ppe-101354	Prunus persica	39.68	1.00e-92	332.00
IUUC-Pte-104146	Pyrenophora teres	57.58	0.00e+00	625.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	55.60	0.00e+00	632.00
IUUC-Sce-106227	Saccharomyces cerevisiae	47.10	6.00e-142	496.00
IUUC-Sja-107925	Schizosaccharomyces japonicus	50.50	4.00e-150	523.00
IUUC-Spo-108359	Schizosaccharomyces pombe	50.00	3.00e-147	513.00
IUUC-Smo-108814	Selaginella moellendorffii	46.68	3.00e-107	380.00
IUUC-Sit-110158	Setaria italica	38.38	5.00e-90	323.00
IUUC-Sly-111569	Solanum lycopersicum	42.86	3.00e-91	327.00
IUUC-Stu-112403	Solanum tuberosum	41.80	4.00e-90	323.00
IUUC-Sbi-113839	Sorghum bicolor	42.42	8.00e-86	309.00
IUUC-Sre-115150	Sporisorium reilianum	47.37	6.00e-119	419.00
IUUC-Tru-118535	Takifugu rubripes	43.91	2.00e-117	414.00
IUUC-Tca-121165	Theobroma cacao	39.62	1.00e-100	358.00
IUUC-Tre-122114	Trichoderma reesei	74.07	0.00e+00	840.00
IUUC-Tvi-122437	Trichoderma virens	72.90	0.00e+00	823.00
IUUC-Tae-125625	Triticum aestivum	38.64	8.00e-99	352.00
IUUC-Tur-126307	Triticum urartu	37.05	2.00e-96	345.00
IUUC-Tme-127208	Tuber melanosporum	56.29	2.00e-164	570.00
IUUC-Ttr-129047	Tursiops truncatus	44.99	1.00e-104	372.00
IUUC-Uma-129320	Ustilago maydis	46.45	1.00e-117	415.00
IUUC-Vda-129926	Verticillium dahliae	71.11	0.00e+00	835.00
IUUC-Vvi-131643	Vitis vinifera	38.96	1.00e-90	325.00
IUUC-Yli-134674	Yarrowia lipolytica	47.12	5.00e-124	436.00
IUUC-Zma-135903	Zea mays	39.32	1.00e-83	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence