iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058044

Ensembl Protein ID

KEH24293

UniProt Accession

A0A072U570; A0A072U570_MEDTR

Genbank Protein ID

KEH24293.1

Protein Name

Transducin family protein/WD-40 repeat protein

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g106870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g106870	KEH24293	KEH24293

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	2.60e-124	415.9	128	433
E3 adaptor/Cullin RING/DCX/DWD	4.00e-26	91.4	263	293

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtl.tghsarvg 100
           e+ ldap++ ddfylnLldW+s+nv+++aL+++vylw+a++++ s+l  + +++  vtsvsw ++g +la+G ++++v+++D++++k++r +  gh arvg
   Q: 128  ERTLDAPDILDDFYLNLLDWGSSNVVSIALENTVYLWNASDSSTSELVTVdDDDGPVTSVSWAPDGRHLAIGLNNSHVQLWDTTACKQLRAMkGGHRARVG 228
           689***********************************************556668************************************778****** PP
   S: 101  aLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse......PlkkfkehkaavkaiawsPwqkslL 195
           +L+Wn+++l++G+ dg+++ +dvrv+ + ++t+ +h+qevCGlkw+ ++++LasGGnDn+v++wd s  +       l++f+eh aavka+aw+P+q +lL
   Q: 229  SLAWNNHILTTGGMDGKVVNNDVRVRSHIVETYMGHNQEVCGLKWSPSGQQLASGGNDNVVHIWDRSVVSsnsptrWLHRFEEHIAAVKALAWCPFQGNLL 329
           *****************************************************************875444554444799********************* PP
   S: 196  asGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwkl 296
           asGGG  D+cik+wnt tga+l+++dtgsqvc llw ++++el+s+hGf+en++tlwkyps+ k+a+l+gh++Rvl++a spdg ++++aa+Detlrfw++
   Q: 330  ASGGGGGDHCIKLWNTHTGARLNSVDTGSQVCALLWNQNERELLSSHGFTENQLTLWKYPSMVKMADLNGHTSRVLYMAQSPDGCTVASAAADETLRFWNV 430
           ***************************************************************************************************** PP
   S: 297  fdk 299
           f +
   Q: 431  FGS 433
           *76 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +v++l++ ++   l+sG++D+++++WD
   Q: 263  GHNQEVCGLKWsPSgQQLASGGNDNVVHIWD 293
           8***********66699************** PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDSGSWSSSS KTKIRTPFPE RFLHRNNSSQ DNLDRFIPNR SAMDFDYAHY MMMEGCRKGK 60
ENPALMSPSR SAYQKRLAEA CNMHDRTRIL AFKNKPPTPV ELFPKELLSP PPLSKSAKPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTCTCTC ATAACATTCT TCTGATCAAT CAAAATCTTC TTCTTCAAGC TTCCGATCAC 60
TCTGAACATT CTTCTGCGCA AATCAATCAT CACAATTCGC AACACGCTTC AATTCATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

mtr:MTR_7g106870

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-012059	Blumeria graminis	43.72	3.00e-93	335.00
IUUC-Cgl-026465	Colletotrichum gloeosporioides	46.39	7.00e-96	343.00
IUUC-Fso-038375	Fusarium solani	46.68	1.00e-94	339.00
IUUC-Loc-052638	Lepisosteus oculatus	42.96	3.00e-89	321.00
IUUC-Sja-107919	Schizosaccharomyces japonicus	46.78	2.00e-97	348.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence