iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-064770

Ensembl Protein ID

GSMUA_Achr6P01660_001

UniProt Accession

M0T3B4; M0T3B4_MUSAM

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr6G01660_001	GSMUA_Achr6T01660_001	GSMUA_Achr6P01660_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-20	73.7	660	690
UBD/Beta-Prp	4.30e-46	158.3	613	747

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           Ht  +t+++f ++ ++l+++s D+t++vWD+
   Q: 660  HTLLITDVRFsPSmPRLATSSFDKTVRVWDV 690
           7888*******777****************8 PP

UBD/Beta-Prp

   S: 46   rslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdlet.gqcleet 132
           +s +  +++v ++ fs+dgk+l+tg+ D+ + +w  ++ k  +tl++h+  +++++fsps  +l++ s d+t+rvwd+++ g+ l+ t
   Q: 613  SSAKASTNKVVCCHFSSDGKLLATGGHDKKAVLWHADDLKLKSTLEEHTLLITDVRFSPSMPRLATSSFDKTVRVWDVDNpGYSLR-T 699
           44455566677777777777777777777777777777777777777777777777777777777777777777777777455555.7 PP
   S: 133  lsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltggh 179
           ++gh+++v+++ +hp++ +l+ s+  D+ +r W++++g++   ++gg 
   Q: 700  FTGHSASVMSLDFHPSKeDLICSCDGDGEMRYWSINNGNCAGVFKGGT 747
           777777777777777777777777777777777777777777777644 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIYDYL MKRDLQATAK SFQAEAKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSDAAASYIE VIFSNSRRSI FKRNTAATTA TVSMTTQHLK AREQQLQQPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCAGA CCAATTGGGA AGCTGATAAG ATGTGAGTTT TGTTTAGTTA GGCTATGGAC 60
TTGCTTGATT GCTCCCCTCT TTGTTCGGTC CTTCGTTTGG GTTTTTTCAG GATTCGAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006446	Arabidopsis lyrata	64.58	0.00e+00	875.00
IUUC-Ath-006594	Arabidopsis thaliana	62.59	0.00e+00	870.00
IUUC-Bdi-014395	Brachypodium distachyon	62.32	0.00e+00	743.00
IUUC-Bol-015720	Brassica oleracea	63.78	0.00e+00	845.00
IUUC-Gma-043858	Glycine max	68.08	0.00e+00	851.00
IUUC-Hvu-047773	Hordeum vulgare	66.89	5.00e-148	516.00
IUUC-Mtr-058613	Medicago truncatula	64.58	0.00e+00	845.00
IUUC-Obr-076118	Oryza brachyantha	63.33	0.00e+00	755.00
IUUC-Oin-079642	Oryza indica	61.79	0.00e+00	894.00
IUUC-Ppa-095985	Physcomitrella patens	64.24	5.00e-150	523.00
IUUC-Pop-098994	Populus trichocarpa	65.98	0.00e+00	876.00
IUUC-Ppe-102018	Prunus persica	66.06	0.00e+00	854.00
IUUC-Smo-109593	Selaginella moellendorffii	52.86	0.00e+00	778.00
IUUC-Sly-110921	Solanum lycopersicum	66.36	0.00e+00	846.00
IUUC-Sbi-113848	Sorghum bicolor	61.78	0.00e+00	763.00
IUUC-Tca-121720	Theobroma cacao	67.44	0.00e+00	859.00
IUUC-Tae-124426	Triticum aestivum	60.71	0.00e+00	763.00
IUUC-Tur-126743	Triticum urartu	54.62	0.00e+00	677.00
IUUC-Vvi-131473	Vitis vinifera	65.51	0.00e+00	873.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence