iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081604

Ensembl Protein ID

OMERI01G08220.1

UniProt Accession

A0A0E0BZG5; A0A0E0BZG5_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI01G08220	OMERI01G08220.1	OMERI01G08220.1
OMERI01G08220	OMERI01G08220.3	OMERI01G08220.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-14	53.3	1076	1108
E3 activity/RING/U-box	3.80e-26	91.9	374	446

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           H+  +t+la   s+  l sGs D ti+vW lr+
   Q: 1076 HKKAITSLAVlhSEEKLFSGSLDRTIRVWQLRD 1108
           8899*****7777799*************9987 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceens 73
           +p++f+CpI+ +++ dPv+l++G+ty+r++I++wl++g+ tcP+tr++l+   l   n++l+rli aw+++n 
   Q: 374  TPKDFVCPITSQVFDDPVTLETGQTYERRAIQEWLDRGNATCPITRHRLHGAHLpSTNYVLKRLIAAWRDQNP 446
           699***************************************************9***************996 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MAGPTPTYSS VVAHTAAFLA ELIADPLLRR HLLSAAAAAG GGGRQQQHPA ATLQALSLVS 60
DALDTAASAP PSLSSLRAAE RLLLSLAAAT PLSCLLLALA SASRRRGGAA AAAAAAAASR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGGC CGACGCCGAC GTACTCGTCG GTGGTGGCGC ACACCGCGGC GTTCCTCGCG 60
GAGCTCATCG CCGACCCGCT CCTCCGGCGA CACCTGCTCT CCGCCGCCGC GGCGGCGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	75.81	0.00e+00	1384.00
IUUC-Atr-002936	Amborella trichopoda	48.54	0.00e+00	753.00
IUUC-Bdi-014680	Brachypodium distachyon	72.70	0.00e+00	1556.00
IUUC-Gma-044085	Glycine max	49.54	0.00e+00	911.00
IUUC-Hvu-047711	Hordeum vulgare	74.16	4.00e-168	583.00
IUUC-Lpe-051224	Leersia perrieri	77.62	0.00e+00	1466.00
IUUC-Mtr-058452	Medicago truncatula	45.53	0.00e+00	912.00
IUUC-Mac-064685	Musa acuminata	57.44	0.00e+00	1043.00
IUUC-Obr-076347	Oryza brachyantha	75.42	0.00e+00	1589.00
IUUC-Ogl-077695	Oryza glaberrima	94.52	0.00e+00	1797.00
IUUC-Ogu-078873	Oryza glumaepatula	94.10	0.00e+00	1831.00
IUUC-Oin-079745	Oryza indica	92.08	0.00e+00	840.00
IUUC-Olo-081050	Oryza longistaminata	81.95	0.00e+00	779.00
IUUC-Oni-082155	Oryza nivara	96.75	0.00e+00	1808.00
IUUC-Opu-083775	Oryza punctata	85.69	0.00e+00	1558.00
IUUC-Oru-084628	Oryza rufipogon	94.15	0.00e+00	1804.00
IUUC-Osa-086224	Oryza sativa	98.19	0.00e+00	628.00
IUUC-Pop-099122	Populus trichocarpa	49.38	0.00e+00	737.00
IUUC-Ppe-101249	Prunus persica	52.12	0.00e+00	852.00
IUUC-Smo-109545	Selaginella moellendorffii	34.60	5.00e-131	461.00
IUUC-Sit-110152	Setaria italica	76.00	0.00e+00	1351.00
IUUC-Sly-111919	Solanum lycopersicum	48.92	0.00e+00	893.00
IUUC-Stu-111946	Solanum tuberosum	49.90	0.00e+00	912.00
IUUC-Sbi-114464	Sorghum bicolor	70.02	0.00e+00	1486.00
IUUC-Tca-121369	Theobroma cacao	52.16	0.00e+00	952.00
IUUC-Tae-123295	Triticum aestivum	73.88	0.00e+00	1612.00
IUUC-Tur-126163	Triticum urartu	77.13	0.00e+00	1121.00
IUUC-Vvi-131144	Vitis vinifera	47.94	0.00e+00	1018.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence