iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110152

Ensembl Protein ID

Si000162m

UniProt Accession

K3XE45; K3XE45_SETIT

Genbank Protein ID

KQL03261.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003532

Gene Name

LOC101752728; SETIT_000162mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si000162m.g	Si000162m	Si000162m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-26	92.9	56	128
E3 adaptor/Cullin RING/DCX/DWD	1.20e-14	54.8	771	806

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceens 73
           +p++f+CpI+ +l++dPv+l++G+ty+r++I++wl++g+ tcP+tr++l+  +l   n++l+rli aw+++++
   Q: 56   TPKDFVCPITSQLFEDPVTLETGQTYERRAIQEWLDRGNATCPITRHRLHGAQLpSTNYVLKRLIAAWRDDQN 128
           699*****************************************************************98765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           Ht  +t+l+   s+  l sGs D ti+vW lr+gvl
   Q: 771  HTKAITSLSVlhSEEKLYSGSLDRTIRVWQLRDGVL 806
           9999*****7777799*****************996 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MFKEKRPASP PSLSKPRRAP PRPGADDARL SPDPARSPVR GDGDPQPPET PQPAATPKDF 60
VCPITSQLFE DPVTLETGQT YERRAIQEWL DRGNATCPIT RHRLHGAQLP STNYVLKRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTAAGG TAATTTAGAT GCATATTTAG GGTCACTTTA GGTTATTTTG ATAATCCGAG 60
ATGTGGGTAA TAGTTTAGAT ACTAATCTAG GGTGCTAATT TTGATTATTT TCTTTATGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	77.21	0.00e+00	1453.00
IUUC-Atr-002936	Amborella trichopoda	49.38	0.00e+00	842.00
IUUC-Bdi-014680	Brachypodium distachyon	75.64	0.00e+00	1452.00
IUUC-Gma-044085	Glycine max	49.60	0.00e+00	1000.00
IUUC-Hvu-047711	Hordeum vulgare	71.97	2.00e-162	564.00
IUUC-Lpe-051224	Leersia perrieri	72.75	0.00e+00	1229.00
IUUC-Mtr-058452	Medicago truncatula	50.35	0.00e+00	964.00
IUUC-Mac-064685	Musa acuminata	59.75	0.00e+00	1123.00
IUUC-Obr-076347	Oryza brachyantha	74.67	0.00e+00	1382.00
IUUC-Ogl-077695	Oryza glaberrima	77.00	0.00e+00	1275.00
IUUC-Ogu-078873	Oryza glumaepatula	76.60	0.00e+00	1301.00
IUUC-Oin-079745	Oryza indica	80.00	0.00e+00	745.00
IUUC-Olo-081050	Oryza longistaminata	72.79	0.00e+00	712.00
IUUC-Ome-081604	Oryza meridionalis	75.90	0.00e+00	1287.00
IUUC-Oni-082155	Oryza nivara	75.90	0.00e+00	1245.00
IUUC-Opu-083775	Oryza punctata	72.17	0.00e+00	1146.00
IUUC-Oru-084628	Oryza rufipogon	73.26	0.00e+00	1242.00
IUUC-Osa-086224	Oryza sativa	75.32	3.00e-137	481.00
IUUC-Pop-099122	Populus trichocarpa	50.11	0.00e+00	806.00
IUUC-Ppe-101249	Prunus persica	55.18	0.00e+00	950.00
IUUC-Smo-109545	Selaginella moellendorffii	36.70	1.00e-143	504.00
IUUC-Sly-111919	Solanum lycopersicum	50.97	0.00e+00	986.00
IUUC-Stu-111946	Solanum tuberosum	53.45	0.00e+00	1014.00
IUUC-Sbi-114464	Sorghum bicolor	80.42	0.00e+00	1559.00
IUUC-Tca-121369	Theobroma cacao	56.20	0.00e+00	1077.00
IUUC-Tae-123295	Triticum aestivum	78.03	0.00e+00	1509.00
IUUC-Tur-126163	Triticum urartu	78.78	0.00e+00	1181.00
IUUC-Vvi-131144	Vitis vinifera	55.71	0.00e+00	1095.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence