iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017359

Ensembl Protein ID

Bra007613.1-P

UniProt Accession

M4CTR9; M4CTR9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra007613	Bra007613.1	Bra007613.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-07	31.3	139	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++++  ++ +p C+H fh +Cl +w       + + +CP+Cr
   Q: 139  CSICLCEYMEEemVRMMPeCKHYFHVSCLDAW------LKLNGSCPVCR 181
           ********6666699999**************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSTATTTFLP PPPPPVPIPT YITSLGLGYS IAIALGFLIL ISTIILSSYI CCRASRLRFS 60
TSAANLDSSF GNRSIIVPRI MFVADGDDLE SAPSGNIVVG GLEQPIINSY PKFRYTKGIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAACCG CCACAACCAC CTTCCTTCCT CCTCCTCCTC CTCCAGTCCC TATCCCTACT 60
TACATAACCA GCCTCGGCCT TGGCTACTCC ATAGCCATAG CTCTTGGTTT CCTCATCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000942	Aegilops tauschii	68.75	3.00e-23	99.40
IUUC-Atr-002663	Amborella trichopoda	53.12	2.00e-32	131.00
IUUC-Aly-005626	Arabidopsis lyrata	77.00	3.00e-67	247.00
IUUC-Ath-007050	Arabidopsis thaliana	75.12	2.00e-64	237.00
IUUC-Bdi-015029	Brachypodium distachyon	46.46	6.00e-26	110.00
IUUC-Bol-015802	Brassica oleracea	93.47	3.00e-94	337.00
IUUC-Gma-042700	Glycine max	51.16	1.00e-20	92.00
IUUC-Hvu-047604	Hordeum vulgare	48.51	7.00e-37	146.00
IUUC-Lpe-050991	Leersia perrieri	49.67	1.00e-32	132.00
IUUC-Mtr-058250	Medicago truncatula	40.80	4.00e-23	100.00
IUUC-Mac-064920	Musa acuminata	45.56	1.00e-20	92.40
IUUC-Oba-075352	Oryza barthii	49.75	4.00e-32	130.00
IUUC-Obr-076398	Oryza brachyantha	47.50	6.00e-31	126.00
IUUC-Ogl-077080	Oryza glaberrima	49.75	4.00e-32	130.00
IUUC-Ogu-077991	Oryza glumaepatula	49.75	4.00e-32	130.00
IUUC-Oin-080020	Oryza indica	49.75	6.00e-32	130.00
IUUC-Olo-080906	Oryza longistaminata	49.75	4.00e-32	130.00
IUUC-Ome-081299	Oryza meridionalis	49.75	4.00e-32	130.00
IUUC-Oni-082889	Oryza nivara	49.25	2.00e-31	128.00
IUUC-Opu-084024	Oryza punctata	48.76	4.00e-31	127.00
IUUC-Oru-084432	Oryza rufipogon	49.25	2.00e-31	128.00
IUUC-Osa-085873	Oryza sativa	49.25	2.00e-31	128.00
IUUC-Ppa-095719	Physcomitrella patens	40.62	6.00e-30	122.00
IUUC-Pop-099130	Populus trichocarpa	56.65	2.00e-40	158.00
IUUC-Ppe-101378	Prunus persica	50.00	4.00e-22	98.20
IUUC-Sit-110496	Setaria italica	46.48	5.00e-29	121.00
IUUC-Sly-111478	Solanum lycopersicum	51.72	6.00e-31	126.00
IUUC-Stu-112524	Solanum tuberosum	51.50	1.00e-34	139.00
IUUC-Sbi-114762	Sorghum bicolor	46.11	3.00e-29	120.00
IUUC-Tae-125019	Triticum aestivum	48.22	5.00e-31	127.00
IUUC-Tur-126402	Triticum urartu	47.96	9.00e-31	126.00
IUUC-Vvi-130869	Vitis vinifera	51.24	2.00e-37	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence