iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078666

Ensembl Protein ID

OGLUM01G39880.1

UniProt Accession

A0A0D9YGT4; A0A0D9YGT4_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM01G39880	OGLUM01G39880.1	OGLUM01G39880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.00e-06	28.3	232	287
E3 activity/RING/RING	1.20e-08	36.4	235	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
            f C I +++ ++Pvv+++G+ +   ++ +wl   s++k+cPv++ ++te +++P 
   Q: 232  TFECNICFDMASEPVVTSCGHLFCWPCLYQWLnvYSNHKECPVCKGEVTEANITPI 287
           79******************************5546666***************97 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+++ ++ p+v++CgH+f+  Cl++w    n+ s++  CP+C+
   Q: 235  CNICFDMASE-PVVTSCGHLFCWPCLYQW---LNVYSNHKECPVCK 276
           99******99.999***************...8899*********7 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MDADEAAGSS RRMDLNLYLG LPRAPRPRRS DLGSDLALST PMPSSPSSSA ASVDAPPPPP 60
ELSHPPYSPS HADLSPPLQE VYSLYNPDDP PASETHLPPY APPPAPVVSE LPDDLEFGLH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCCG ATGAGGCCGC GGGGAGTAGC AGGAGGATGG ATCTGAACCT CTACCTTGGC 60
CTCCCACGCG CCCCGCGCCC GCGCCGCTCC GACCTCGGCT CCGACCTCGC CCTCAGCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000886	Aegilops tauschii	71.43	6.00e-112	396.00
IUUC-Aly-006126	Arabidopsis lyrata	47.86	2.00e-31	129.00
IUUC-Ath-007143	Arabidopsis thaliana	47.01	4.00e-31	128.00
IUUC-Bdi-014417	Brachypodium distachyon	70.30	4.00e-151	527.00
IUUC-Bol-015635	Brassica oleracea	46.88	9.00e-32	130.00
IUUC-Cgl-026743	Colletotrichum gloeosporioides	41.07	2.00e-10	60.10
IUUC-Hvu-047402	Hordeum vulgare	70.49	3.00e-157	548.00
IUUC-Kpa-049392	Komagataella pastoris	40.38	3.00e-08	52.00
IUUC-Lpe-051486	Leersia perrieri	90.94	0.00e+00	801.00
IUUC-Mvi-060316	Microbotryum violaceum	43.84	7.00e-14	70.10
IUUC-Mac-065370	Musa acuminata	42.65	3.00e-75	275.00
IUUC-Ncr-068628	Neurospora crassa	35.37	2.00e-10	60.10
IUUC-Oba-075745	Oryza barthii	99.64	0.00e+00	883.00
IUUC-Obr-076242	Oryza brachyantha	92.87	0.00e+00	807.00
IUUC-Ogl-077431	Oryza glaberrima	99.64	0.00e+00	883.00
IUUC-Oin-079645	Oryza indica	99.64	0.00e+00	883.00
IUUC-Olo-080972	Oryza longistaminata	98.93	0.00e+00	872.00
IUUC-Oni-082132	Oryza nivara	99.64	0.00e+00	883.00
IUUC-Opu-083673	Oryza punctata	96.75	0.00e+00	813.00
IUUC-Oru-084822	Oryza rufipogon	99.47	0.00e+00	878.00
IUUC-Osa-085696	Oryza sativa	99.64	0.00e+00	883.00
IUUC-Pno-094942	Phaeosphaeria nodorum	31.07	2.00e-11	62.40
IUUC-Pgr-103455	Puccinia graminis	30.12	1.00e-08	53.50
IUUC-Stu-112210	Solanum tuberosum	59.18	4.00e-32	131.00
IUUC-Tae-125367	Triticum aestivum	72.71	1.00e-177	615.00
IUUC-Tur-126535	Triticum urartu	71.95	2.00e-127	447.00
IUUC-Tme-126916	Tuber melanosporum	40.74	3.00e-09	57.00
IUUC-Uma-129328	Ustilago maydis	26.42	3.00e-08	52.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence