iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017502

Ensembl Protein ID

Bra030028.1-P

UniProt Accession

M4EMK8; M4EMK8_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra030028	Bra030028.1	Bra030028.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-30	106.6	268	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee++CpIsl+lM+dPv+++sG+ty+r +Iekw+ +g+++cP+t+q+l + +l+Pn+ ++ li +wce+n++
   Q: 268  PPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFGDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGI 340
           79********************************************************************987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDVSELEENL FAASDAKLHR DMCKELSAVY CKVLSIFPSL EEARPRSKSG IQALCSLHIA 60
LEKAKNILQH CSESSKLYLA ITGDAVLLKF EKAKSALIDS LRRVEDIVPS SIGSQILDII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTAA GCGAGCTTGA GGAGAATTTG TTCGCTGCTA GCGATGCCAA GGTATATTTA 60
TATTCTCAAT CCCGTCACTC TCTCTCTCTC TCTCAATGAT TCTTGTCGGT AGACTCTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006405	Arabidopsis lyrata	84.14	0.00e+00	1306.00
IUUC-Bol-015505	Brassica oleracea	96.61	0.00e+00	1510.00
IUUC-Gma-043476	Glycine max	65.85	0.00e+00	960.00
IUUC-Mtr-058026	Medicago truncatula	65.98	0.00e+00	919.00
IUUC-Mac-064644	Musa acuminata	53.95	0.00e+00	701.00
IUUC-Obr-076068	Oryza brachyantha	52.69	0.00e+00	765.00
IUUC-Ogu-078230	Oryza glumaepatula	53.49	0.00e+00	791.00
IUUC-Oni-082610	Oryza nivara	53.75	0.00e+00	790.00
IUUC-Oru-084375	Oryza rufipogon	52.80	0.00e+00	783.00
IUUC-Osa-085376	Oryza sativa	53.12	0.00e+00	786.00
IUUC-Ppa-095879	Physcomitrella patens	36.43	2.00e-128	452.00
IUUC-Pop-100088	Populus trichocarpa	67.89	0.00e+00	1045.00
IUUC-Tca-121734	Theobroma cacao	70.03	0.00e+00	1053.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence