iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099279

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000349

Gene Name

POPTR_0013s09080g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s09080	POPTR_0013s09080.1	POPTR_0013s09080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-08	36.3	100	142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp...CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl d++ + ++ +   CgH+fh dC+ +w        ++++CPlCr
   Q: 100  CPVCLGDYQAEDKLQQipaCGHTFHMDCIDHW------LANHITCPLCR 142
           ********55544433449*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSRSKSEPPS CCSTTASSTS RSPVASTELK LYQAFIFSVP IFFTFILLFL FYLFYLRRRR 60
VDWASIRMQA SLQDHTVDIS RHLILSVDYL MRCSLYEHRC PVCLGDYQAE DKLQQIPACG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCGTT CCAAATCTGA GCCGCCTAGT TGCTGTTCAA CAACAGCCTC TTCTACTTCA 60
CGATCACCAG TAGCTTCAAC TGAGCTGAAG TTATACCAAG CTTTCATCTT TTCTGTTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0013s09080g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005500	Arabidopsis lyrata	43.75	1.00e-29	122.00
IUUC-Ath-007076	Arabidopsis thaliana	43.37	8.00e-31	126.00
IUUC-Bdi-014087	Brachypodium distachyon	49.04	3.00e-27	114.00
IUUC-Bol-016221	Brassica oleracea	43.52	4.00e-27	114.00
IUUC-Bra-017381	Brassica rapa	60.29	1.00e-22	98.60
IUUC-Gma-043458	Glycine max	46.39	1.00e-24	105.00
IUUC-Lpe-051002	Leersia perrieri	44.50	1.00e-28	119.00
IUUC-Mtr-058067	Medicago truncatula	50.75	8.00e-31	126.00
IUUC-Mac-065514	Musa acuminata	50.91	2.00e-29	121.00
IUUC-Oba-075393	Oryza barthii	50.00	6.00e-29	120.00
IUUC-Obr-076149	Oryza brachyantha	52.05	3.00e-28	117.00
IUUC-Ogl-077140	Oryza glaberrima	50.00	6.00e-29	120.00
IUUC-Ogu-078926	Oryza glumaepatula	50.00	6.00e-29	120.00
IUUC-Oin-080003	Oryza indica	43.81	7.00e-23	99.40
IUUC-Ome-081399	Oryza meridionalis	49.38	2.00e-28	118.00
IUUC-Oni-082750	Oryza nivara	50.00	6.00e-29	120.00
IUUC-Opu-083446	Oryza punctata	50.00	4.00e-29	120.00
IUUC-Oru-084873	Oryza rufipogon	50.00	6.00e-29	120.00
IUUC-Osa-085898	Oryza sativa	50.00	6.00e-29	120.00
IUUC-Ppe-101232	Prunus persica	44.19	9.00e-33	132.00
IUUC-Sit-110610	Setaria italica	48.47	5.00e-27	114.00
IUUC-Sly-111610	Solanum lycopersicum	57.45	1.00e-28	119.00
IUUC-Stu-112875	Solanum tuberosum	45.62	5.00e-28	117.00
IUUC-Sbi-114101	Sorghum bicolor	53.19	6.00e-27	113.00
IUUC-Tca-121298	Theobroma cacao	56.44	1.00e-43	169.00
IUUC-Tae-124847	Triticum aestivum	46.30	5.00e-26	110.00
IUUC-Tur-126109	Triticum urartu	45.68	8.00e-26	109.00
IUUC-Vvi-131331	Vitis vinifera	50.24	1.00e-37	149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence